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Cdx1 and Gsc distinctly regulate the transcription of BMP4 target gene ventx3.2 by directly binding to the proximal promoter region in Xenopus gastrulae. , Goutam RS., Mol Cells. March 23, 2024; 47 (4): 100058.
ZSWIM4 regulates embryonic patterning and BMP signaling by promoting nuclear Smad1 degradation. , Wang C ., EMBO Rep. February 1, 2024; 25 (2): 646-671.
Mitochondrial leak metabolism induces the Spemann-Mangold Organizer via Hif-1α in Xenopus. , MacColl Garfinkel A., Dev Cell. November 20, 2023; 58 (22): 2597-2613.e4.
Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR. , Sempou E., Nat Commun. November 5, 2022; 13 (1): 6681.
Bmp4 Synexpression Gene, Sizzled, Transcription Is Collectively Modulated by Smad1 and Ventx1.1/Ventx2.1 in Early Xenopus Embryos. , Rehman ZU ., Int J Mol Sci. November 1, 2022; 23 (21):
Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions. , Johnson K., BMC Genomics. October 23, 2022; 23 (1): 723.
The homeodomain transcription factor Ventx2 regulates respiratory progenitor cell number and differentiation timing during Xenopus lung development. , Rankin SA , Rankin SA ., Dev Growth Differ. September 1, 2022; 64 (7): 347-361.
Goosecoid Controls Neuroectoderm Specification via Dual Circuits of Direct Repression and Indirect Stimulation in Xenopus Embryos. , Umair Z., Mol Cells. October 31, 2021; 44 (10): 723-735.
Foxd4l1.1 Negatively Regulates Chordin Transcription in Neuroectoderm of Xenopus Gastrula. , Kumar V ., Cells. October 17, 2021; 10 (10):
The atypical RNA-binding protein Taf15 regulates dorsoanterior neural development through diverse mechanisms in Xenopus tropicalis. , DeJong CS., Development. August 1, 2021; 148 (15):
Smad2 and Smad3 differentially modulate chordin transcription via direct binding on the distal elements in gastrula Xenopus embryos. , Kumar V ., Biochem Biophys Res Commun. June 25, 2021; 559 168-175.
A temporally resolved transcriptome for developing "Keller" explants of the Xenopus laevis dorsal marginal zone. , Kakebeen AD., Dev Dyn. May 1, 2021; 250 (5): 717-731.
R-spondins are BMP receptor antagonists in Xenopus early embryonic development. , Lee H , Lee H ., Nat Commun. November 4, 2020; 11 (1): 5570.
TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis. , Chen M., Elife. September 14, 2020; 9
Natural size variation among embryos leads to the corresponding scaling in gene expression. , Leibovich A., Dev Biol. June 15, 2020; 462 (2): 165-179.
Modeling Bainbridge-Ropers Syndrome in Xenopus laevis Embryos. , Lichtig H., Front Physiol. January 1, 2020; 11 75.
BAP1 regulates epigenetic switch from pluripotency to differentiation in developmental lineages giving rise to BAP1-mutant cancers. , Kuznetsov JN ., Sci Adv. September 18, 2019; 5 (9): eaax1738.
Ventx1.1 competes with a transcriptional activator Xcad2 to regulate negatively its own expression. , Kumar S , Kumar S ., BMB Rep. June 1, 2019; 52 (6): 403-408.
Barhl2 maintains T cell factors as repressors and thereby switches off the Wnt/ β-Catenin response driving Spemann organizer formation. , Sena E., Development. May 22, 2019; 146 (10):
Leukemia inhibitory factor signaling in Xenopus embryo: Insights from gain of function analysis and dominant negative mutant of the receptor. , Jalvy S., Dev Biol. March 15, 2019; 447 (2): 200-213.
A transition from SoxB1 to SoxE transcription factors is essential for progression from pluripotent blastula cells to neural crest cells. , Buitrago-Delgado E., Dev Biol. December 15, 2018; 444 (2): 50-61.
Fam46a regulates BMP-dependent pre-placodal ectoderm differentiation in Xenopus. , Watanabe T., Development. October 26, 2018; 145 (20):
Histone deacetylase activity has an essential role in establishing and maintaining the vertebrate neural crest. , Rao A., Development. August 8, 2018; 145 (15):
Notch1 is asymmetrically distributed from the beginning of embryogenesis and controls the ventral center. , Castro Colabianchi AM., Development. July 17, 2018; 145 (14):
A gene regulatory network underlying the formation of pre-placodal ectoderm in Xenopus laevis. , Maharana SK ., BMC Biol. July 16, 2018; 16 (1): 79.
Tbx2 is required for the suppression of mesendoderm during early Xenopus development. , Teegala S ., Dev Dyn. July 1, 2018; 247 (7): 903-913.
The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution. , Briggs JA., Science. June 1, 2018; 360 (6392):
PAWS1 controls Wnt signalling through association with casein kinase 1α. , Bozatzi P., EMBO Rep. April 1, 2018; 19 (4):
Timing is everything: Reiterative Wnt, BMP and RA signaling regulate developmental competence during endoderm organogenesis. , Rankin SA , Rankin SA ., Dev Biol. February 1, 2018; 434 (1): 121-132.
FGF mediated MAPK and PI3K/Akt Signals make distinct contributions to pluripotency and the establishment of Neural Crest. , Geary L., Elife. January 19, 2018; 7
Xenopus Hybrids Provide Insight Into Cell and Organism Size Control. , Gibeaux R., Front Physiol. January 1, 2018; 9 1758.
Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2. , Scerbo P ., Elife. June 27, 2017; 6
Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing. , Popov IK., Dev Biol. June 15, 2017; 426 (2): 429-441.
A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo. , Blitz IL ., Dev Biol. June 15, 2017; 426 (2): 409-417.
A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs. , Charney RM ., Semin Cell Dev Biol. June 1, 2017; 66 12-24.
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition. , Wagner G., PLoS Genet. May 12, 2017; 13 (5): e1006757.
Genomic integration of Wnt/ β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs. , Stevens ML ., Development. April 1, 2017; 144 (7): 1283-1295.
Ubiquitin C-terminal hydrolase37 regulates Tcf7 DNA binding for the activation of Wnt signalling. , Han W., Sci Rep. February 15, 2017; 7 42590.
FoxD1 protein interacts with Wnt and BMP signaling to differentially pattern mesoderm and neural tissue. , Polevoy H., Int J Dev Biol. January 1, 2017; 61 (3-4-5): 293-302.
The MLL/Setd1b methyltransferase is required for the Spemann's organizer gene activation in Xenopus. , Lin H., Mech Dev. November 1, 2016; 142 1-9.
Tril targets Smad7 for degradation to allow hematopoietic specification in Xenopus embryos. , Green YS., Development. November 1, 2016; 143 (21): 4016-4026.
Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1. , Liu C., Dev Biol. January 1, 2016; 409 (1): 26-38.
Kdm2a/b Lysine Demethylases Regulate Canonical Wnt Signaling by Modulating the Stability of Nuclear β-Catenin. , Lu L., Dev Cell. June 22, 2015; 33 (6): 660-74.
NEURODEVELOPMENT. Shared regulatory programs suggest retention of blastula-stage potential in neural crest cells. , Buitrago-Delgado E., Science. June 19, 2015; 348 (6241): 1332-5.
Notum is required for neural and head induction via Wnt deacylation, oxidation, and inactivation. , Zhang X., Dev Cell. March 23, 2015; 32 (6): 719-30.
The serpin PN1 is a feedback regulator of FGF signaling in germ layer and primary axis formation. , Acosta H., Development. March 15, 2015; 142 (6): 1146-58.
Genome-wide view of TGFβ/ Foxh1 regulation of the early mesendoderm program. , Chiu WT ., Development. December 1, 2014; 141 (23): 4537-47.
Sox5 Is a DNA-binding cofactor for BMP R-Smads that directs target specificity during patterning of the early ectoderm. , Nordin K., Dev Cell. November 10, 2014; 31 (3): 374-382.
Gtpbp2 is required for BMP signaling and mesoderm patterning in Xenopus embryos. , Kirmizitas A., Dev Biol. August 15, 2014; 392 (2): 358-67.
Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification. , Yasuoka Y ., Nat Commun. July 9, 2014; 5 4322.