Papers associated with vegetal yolk mass (and gsc)

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	ZSWIM4 regulates embryonic patterning and BMP signaling by promoting nuclear Smad1 degradation., Wang C., EMBO Rep. February 1, 2024; 25 (2): 646-671.
	Mitochondrial leak metabolism induces the Spemann-Mangold Organizer via Hif-1α in Xenopus., MacColl Garfinkel A., Dev Cell. November 20, 2023; 58 (22): 2597-2613.e4.
	The complete dorsal structure is formed from only the blastocoel roof of Xenopus blastula: insight into the gastrulation movement evolutionarily conserved among chordates., Sato Y., Dev Genes Evol. June 1, 2023; 233 (1): 1-12.
	Recognition of H2AK119ub plays an important role in RSF1-regulated early Xenopus development., Parast SM., Front Cell Dev Biol. January 1, 2023; 11 1168643.
	Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E., Nat Commun. November 5, 2022; 13 (1): 6681.
	HMCES modulates the transcriptional regulation of nodal/activin and BMP signaling in mESCs., Liang T., Cell Rep. July 12, 2022; 40 (2): 111038.
	Evo-Devo of Urbilateria and its larval forms., De Robertis EM., Dev Biol. July 1, 2022; 487 10-20.
	Retinoic Acid is Required for Normal Morphogenetic Movements During Gastrulation., Gur M., Front Cell Dev Biol. January 1, 2022; 10 857230.
	Tril dampens Nodal signaling through Pellino2- and Traf6-mediated activation of Nedd4l., Kim HS., Proc Natl Acad Sci U S A. September 7, 2021; 118 (36):
	Rab7 is required for mesoderm patterning and gastrulation in Xenopus., Kreis J., Biol Open. July 15, 2021; 10 (7):
	Furry is required for cell movements during gastrulation and functionally interacts with NDR1., Cervino AS., Sci Rep. March 23, 2021; 11 (1): 6607.
	Segregation of brain and organizer precursors is differentially regulated by Nodal signaling at blastula stage., Castro Colabianchi AM., Biol Open. February 25, 2021; 10 (2):
	TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis., Chen M., Elife. September 14, 2020; 9
	Natural size variation among embryos leads to the corresponding scaling in gene expression., Leibovich A., Dev Biol. June 15, 2020; 462 (2): 165-179.
	Chromatin accessibility and histone acetylation in the regulation of competence in early development., Esmaeili M., Dev Biol. June 1, 2020; 462 (1): 20-35.
	The tumor suppressor PTPRK promotes ZNRF3 internalization and is required for Wnt inhibition in the Spemann organizer., Chang LS., Elife. January 14, 2020; 9
	Integration of Wnt and FGF signaling in the Xenopus gastrula at TCF and Ets binding sites shows the importance of short-range repression by TCF in patterning the marginal zone., Kjolby RAS., Development. August 9, 2019; 146 (15):
	Evolution of cis-regulatory modules for the head organizer gene goosecoid in chordates: comparisons between Branchiostoma and Xenopus., Yasuoka Y., Zoological Lett. August 2, 2019; 5 27.
	Barhl2 maintains T cell factors as repressors and thereby switches off the Wnt/β-Catenin response driving Spemann organizer formation., Sena E., Development. May 22, 2019; 146 (10):
	Nucleotide receptor P2RY4 is required for head formation via induction and maintenance of head organizer in Xenopus laevis., Harata A., Dev Growth Differ. February 1, 2019; 61 (2): 186-197.
	Phosphorylation states change Otx2 activity for cell proliferation and patterning in the Xenopus embryo., Satou Y., Development. March 12, 2018; 145 (5):
	A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates., Plouhinec JL., PLoS Biol. October 19, 2017; 15 (10): e2004045.
	Nodal/Activin Pathway is a Conserved Neural Induction Signal in Chordates., Le Petillon Y., Nat Ecol Evol. August 1, 2017; 1 (8): 1192-1200.
	Sorting at embryonic boundaries requires high heterotypic interfacial tension., Canty L., Nat Commun. July 31, 2017; 8 (1): 157.
	Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2., Scerbo P., Elife. June 27, 2017; 6
	Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing., Popov IK., Dev Biol. June 15, 2017; 426 (2): 429-441.
	Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition., Wagner G., PLoS Genet. May 12, 2017; 13 (5): e1006757.
	Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis., Ding Y., Proc Natl Acad Sci U S A. April 11, 2017; 114 (15): E3081-E3090.
	Specification of anteroposterior axis by combinatorial signaling during Xenopus development., Carron C., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.
	Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1., Liu C., Dev Biol. January 1, 2016; 409 (1): 26-38.
	Kruppel-like factor family genes are expressed during Xenopus embryogenesis and involved in germ layer formation and body axis patterning., Gao Y., Dev Dyn. October 1, 2015; 244 (10): 1328-46.
	JmjC Domain-containing Protein 6 (Jmjd6) Derepresses the Transcriptional Repressor Transcription Factor 7-like 1 (Tcf7l1) and Is Required for Body Axis Patterning during Xenopus Embryogenesis., Zhang X., J Biol Chem. August 14, 2015; 290 (33): 20273-83.
	The serpin PN1 is a feedback regulator of FGF signaling in germ layer and primary axis formation., Acosta H., Development. March 15, 2015; 142 (6): 1146-58.
	E2a is necessary for Smad2/3-dependent transcription and the direct repression of lefty during gastrulation., Wills AE., Dev Cell. February 9, 2015; 32 (3): 345-57.
	Phosphorylation-dependent ubiquitination of paraxial protocadherin (PAPC) controls gastrulation cell movements., Kai M., PLoS One. January 12, 2015; 10 (1): e0115111.
	Genome-wide view of TGFβ/Foxh1 regulation of the early mesendoderm program., Chiu WT., Development. December 1, 2014; 141 (23): 4537-47.
	Fezf2 promotes neuronal differentiation through localised activation of Wnt/β-catenin signalling during forebrain development., Zhang S., Development. December 1, 2014; 141 (24): 4794-805.
	Developmental enhancers are marked independently of zygotic Nodal signals in Xenopus., Gupta R., Dev Biol. November 1, 2014; 395 (1): 38-49.
	EphA4-dependent Brachyury expression is required for dorsal mesoderm involution in the Xenopus gastrula., Evren S., Development. October 1, 2014; 141 (19): 3649-61.
	The splicing factor PQBP1 regulates mesodermal and neural development through FGF signaling., Iwasaki Y., Development. October 1, 2014; 141 (19): 3740-51.
	The PDZ domain protein Mcc is a novel effector of non-canonical Wnt signaling during convergence and extension in zebrafish., Young T., Development. September 1, 2014; 141 (18): 3505-16.
	NEDD4L regulates convergent extension movements in Xenopus embryos via Disheveled-mediated non-canonical Wnt signaling., Zhang Y., Dev Biol. August 1, 2014; 392 (1): 15-25.
	Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification., Yasuoka Y., Nat Commun. July 9, 2014; 5 4322.
	FoxA4 favours notochord formation by inhibiting contiguous mesodermal fates and restricts anterior neural development in Xenopus embryos., Murgan S., PLoS One. January 1, 2014; 9 (10): e110559.
	The Xenopus homologue of Down syndrome critical region protein 6 drives dorsoanterior gene expression and embryonic axis formation by antagonising polycomb group proteins., Li HY., Development. December 1, 2013; 140 (24): 4903-13.
	Dhrs3 protein attenuates retinoic acid signaling and is required for early embryonic patterning., Kam RK., J Biol Chem. November 1, 2013; 288 (44): 31477-87.
	The Xenopus Tgfbi is required for embryogenesis through regulation of canonical Wnt signalling., Wang F., Dev Biol. July 1, 2013; 379 (1): 16-27.
	An intact brachyury function is necessary to prevent spurious axial development in Xenopus laevis., Aguirre CE., PLoS One. January 1, 2013; 8 (1): e54777.
	The Wnt signaling mediator tcf1 is required for expression of foxd3 during Xenopus gastrulation., Janssens S., Int J Dev Biol. January 1, 2013; 57 (1): 49-54.
	Transcriptional regulation of mesoderm genes by MEF2D during early Xenopus development., Kolpakova A., PLoS One. January 1, 2013; 8 (7): e69693.

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