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Summary Anatomy Item Literature (7318) Expression Attributions Wiki
XB-ANAT-489

Papers associated with trunk (and tbxt)

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Mechanistic study of transcription factor Sox18 during heart development., Liang J., Gen Comp Endocrinol. May 1, 2024; 350 114472.


Mechanical Tensions Regulate Gene Expression in the Xenopus laevis Axial Tissues., Eroshkin FM., Int J Mol Sci. January 10, 2024; 25 (2):         


Gene expression in notochord and nuclei pulposi: a study of gene families across the chordate phylum., Raghavan R., BMC Ecol Evol. October 27, 2023; 23 (1): 63.                            


Purine Biosynthesis Pathways Are Required for Myogenesis in Xenopus laevis., Duperray M., Cells. September 28, 2023; 12 (19):               


The complete dorsal structure is formed from only the blastocoel roof of Xenopus blastula: insight into the gastrulation movement evolutionarily conserved among chordates., Sato Y., Dev Genes Evol. June 1, 2023; 233 (1): 1-12.                


OTUD3: A Lys6 and Lys63 specific deubiquitinase in early vertebrate development., Job F., Biochim Biophys Acta Gene Regul Mech. March 1, 2023; 1866 (1): 194901.                


Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E., Nat Commun. November 5, 2022; 13 (1): 6681.                                            


Normal Table of Xenopus development: a new graphical resource., Zahn N., Development. July 15, 2022; 149 (14):                         


HMCES modulates the transcriptional regulation of nodal/activin and BMP signaling in mESCs., Liang T., Cell Rep. July 12, 2022; 40 (2): 111038.                              


Xbp1 and Brachyury establish an evolutionarily conserved subcircuit of the notochord gene regulatory network., Wu Y., Elife. January 20, 2022; 11                             


The enpp4 ectonucleotidase regulates kidney patterning signalling networks in Xenopus embryos., Massé K., Commun Biol. October 7, 2021; 4 (1): 1158.                                


Rab7 is required for mesoderm patterning and gastrulation in Xenopus., Kreis J., Biol Open. July 15, 2021; 10 (7):                                           


Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR., EMBO J. May 3, 2021; 40 (9): e104913.                        


Evolution of Somite Compartmentalization: A View From Xenopus., Della Gaspera B., Front Cell Dev Biol. January 1, 2021; 9 790847.                  


Xenopus gpx3 Mediates Posterior Development by Regulating Cell Death during Embryogenesis., Lee H, Lee H., Antioxidants (Basel). December 12, 2020; 9 (12):               


Chromatin accessibility and histone acetylation in the regulation of competence in early development., Esmaeili M., Dev Biol. June 1, 2020; 462 (1): 20-35.                


The secreted BMP antagonist ERFE is required for the development of a functional circulatory system in Xenopus., Melchert J., Dev Biol. March 15, 2020; 459 (2): 138-148.                                


Modeling Bainbridge-Ropers Syndrome in Xenopus laevis Embryos., Lichtig H., Front Physiol. January 1, 2020; 11 75.                    


Maternal pluripotency factors initiate extensive chromatin remodelling to predefine first response to inductive signals., Gentsch GE., Nat Commun. September 19, 2019; 10 (1): 4269.                                        


The Wnt inhibitor Dkk1 is required for maintaining the normal cardiac differentiation program in Xenopus laevis., Guo Y., Dev Biol. May 1, 2019; 449 (1): 1-13.                                  


Liver Specification in the Absence of Cardiac Differentiation Revealed by Differential Sensitivity to Wnt/β Catenin Pathway Activation., Haworth K., Front Physiol. January 1, 2019; 10 155.              


A YWHAZ Variant Associated With Cardiofaciocutaneous Syndrome Activates the RAF-ERK Pathway., Popov IK., Front Physiol. January 1, 2019; 10 388.                                


The extraordinary biology and development of marsupial frogs (Hemiphractidae) in comparison with fish, mammals, birds, amphibians and other animals., Del Pino EM., Mech Dev. December 1, 2018; 154 2-11.        


Characterization of potential TRPP2 regulating proteins in early Xenopus embryos., Futel M., J Cell Biochem. December 1, 2018; 119 (12): 10338-10350.  


RARγ is required for mesodermal gene expression prior to gastrulation in Xenopus., Janesick A., Development. September 17, 2018; 145 (18):                           


An Early Function of Polycystin-2 for Left-Right Organizer Induction in Xenopus., Vick P., iScience. April 27, 2018; 2 76-85.                                        


Innate Immune Response and Off-Target Mis-splicing Are Common Morpholino-Induced Side Effects in Xenopus., Gentsch GE., Dev Cell. March 12, 2018; 44 (5): 597-610.e10.                                            


Ketamine Modulates Zic5 Expression via the Notch Signaling Pathway in Neural Crest Induction., Shi Y, Shi Y., Front Mol Neurosci. February 7, 2018; 11 9.          


Candidate Heterotaxy Gene FGFR4 Is Essential for Patterning of the Left-Right Organizer in Xenopus., Sempou E., Front Physiol. January 1, 2018; 9 1705.              


Xenopus pitx3 target genes lhx1 and xnr5 are identified using a novel three-fluor flow cytometry-based analysis of promoter activation and repression., Hooker LN., Dev Dyn. September 1, 2017; 246 (9): 657-669.                    


Cells from subcutaneous tissues contribute to scarless skin regeneration in Xenopus laevis froglets., Otsuka-Yamaguchi R., Dev Dyn. August 1, 2017; 246 (8): 585-597.              


Id genes are essential for early heart formation., Cunningham TJ., Genes Dev. July 1, 2017; 31 (13): 1325-1338.                


Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing., Popov IK., Dev Biol. June 15, 2017; 426 (2): 429-441.                    


A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM., Semin Cell Dev Biol. June 1, 2017; 66 12-24.    


Coordinating heart morphogenesis: A novel role for hyperpolarization-activated cyclic nucleotide-gated (HCN) channels during cardiogenesis in Xenopus laevis., Pitcairn E., Commun Integr Biol. May 10, 2017; 10 (3): e1309488.                            


Splicing variation of Long-IRBIT determines the target selectivity of IRBIT family proteins., Kawaai K., Proc Natl Acad Sci U S A. April 11, 2017; 114 (15): 3921-3926.                          


Ubiquitin C-terminal hydrolase37 regulates Tcf7 DNA binding for the activation of Wnt signalling., Han W., Sci Rep. February 15, 2017; 7 42590.                        


Nodal signalling in Xenopus: the role of Xnr5 in left/right asymmetry and heart development., Tadjuidje E., Open Biol. August 1, 2016; 6 (8):             


Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development., Owens ND., Cell Rep. January 26, 2016; 14 (3): 632-47.                                                  


Specification of anteroposterior axis by combinatorial signaling during Xenopus development., Carron C., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.            


Expression pattern of bcar3, a downstream target of Gata2, and its binding partner, bcar1, during Xenopus development., Green YS., Gene Expr Patterns. January 1, 2016; 20 (1): 55-62.                  


Kruppel-like factor family genes are expressed during Xenopus embryogenesis and involved in germ layer formation and body axis patterning., Gao Y., Dev Dyn. October 1, 2015; 244 (10): 1328-46.                                    


Xenopus Pkdcc1 and Pkdcc2 Are Two New Tyrosine Kinases Involved in the Regulation of JNK Dependent Wnt/PCP Signaling Pathway., Vitorino M., PLoS One. August 13, 2015; 10 (8): e0135504.                                    


Mesodermal origin of median fin mesenchyme and tail muscle in amphibian larvae., Taniguchi Y., Sci Rep. June 18, 2015; 5 11428.                


A time space translation hypothesis for vertebrate axial patterning., Durston AJ., Semin Cell Dev Biol. June 1, 2015; 42 86-93.  


Notum is required for neural and head induction via Wnt deacylation, oxidation, and inactivation., Zhang X., Dev Cell. March 23, 2015; 32 (6): 719-30.                                  


The serpin PN1 is a feedback regulator of FGF signaling in germ layer and primary axis formation., Acosta H., Development. March 15, 2015; 142 (6): 1146-58.                                    


Regulation of nuclear-cytoplasmic shuttling and function of Family with sequence similarity 13, member A (Fam13a), by B56-containing PP2As and Akt., Jin Z., Mol Biol Cell. March 15, 2015; 26 (6): 1160-73.                  


E2a is necessary for Smad2/3-dependent transcription and the direct repression of lefty during gastrulation., Wills AE., Dev Cell. February 9, 2015; 32 (3): 345-57.                  


The alternative splicing regulator Tra2b is required for somitogenesis and regulates splicing of an inhibitory Wnt11b isoform., Dichmann DS., Cell Rep. February 3, 2015; 10 (4): 527-36.                    

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