Papers associated with mesoderm (and shh)

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	Mechanical Tensions Regulate Gene Expression in the Xenopus laevis Axial Tissues., Eroshkin FM., Int J Mol Sci. January 10, 2024; 25 (2):
	Cilia-localized GID/CTLH ubiquitin ligase complex regulates protein homeostasis of sonic hedgehog signaling components., Hantel F., J Cell Sci. May 1, 2022; 135 (9):
	Acute multidrug delivery via a wearable bioreactor facilitates long-term limb regeneration and functional recovery in adult Xenopus laevis., Murugan NJ., Sci Adv. January 28, 2022; 8 (4): eabj2164.
	Xbp1 and Brachyury establish an evolutionarily conserved subcircuit of the notochord gene regulatory network., Wu Y., Elife. January 20, 2022; 11
	Targeted search for scaling genes reveals matrixmetalloproteinase 3 as a scaler of the dorsal-ventral pattern in Xenopus laevis embryos., Orlov EE., Dev Cell. January 10, 2022; 57 (1): 95-111.e12.
	Nodal asymmetry and hedgehog signaling during vertebrate left-right symmetry breaking., Negretti MI., Front Cell Dev Biol. January 1, 2022; 10 957211.
	Tbx5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development., Rankin SA, Rankin SA., Elife. October 13, 2021; 10
	Rab7 is required for mesoderm patterning and gastrulation in Xenopus., Kreis J., Biol Open. July 15, 2021; 10 (7):
	Protocadherin-1 is expressed in the notochord of mouse embryo but is dispensable for its formation., Fukunaga K., Biochem Biophys Rep. June 15, 2021; 27 101047.
	Pinhead antagonizes Admp to promote notochord formation., Itoh K., iScience. May 7, 2021; 24 (6): 102520.
	Evolution of Somite Compartmentalization: A View From Xenopus., Della Gaspera B., Front Cell Dev Biol. January 1, 2021; 9 790847.
	TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis., Chen M., Elife. September 14, 2020; 9
	Endosome-Mediated Epithelial Remodeling Downstream of Hedgehog-Gli Is Required for Tracheoesophageal Separation., Nasr T., Dev Cell. December 16, 2019; 51 (6): 665-674.e6.
	Cell type-specific transcriptome analysis unveils secreted signaling molecule genes expressed in apical epithelial cap during appendage regeneration., Okumura A., Dev Growth Differ. December 1, 2019; 61 (9): 447-456.
	Barhl2 maintains T cell factors as repressors and thereby switches off the Wnt/β-Catenin response driving Spemann organizer formation., Sena E., Development. May 22, 2019; 146 (10):
	A dual function of FGF signaling in Xenopus left-right axis formation., Schneider I., Development. May 10, 2019; 146 (9):
	Xenopus slc7a5 is essential for notochord function and eye development., Katada T., Mech Dev. February 1, 2019; 155 48-59.
	Gli2 is required for the induction and migration of Xenopus laevis neural crest., Cerrizuela S., Mech Dev. December 1, 2018; 154 219-239.
	WDR5 regulates left-right patterning via chromatin-dependent and -independent functions., Kulkarni SS., Development. November 28, 2018; 145 (23):
	Evolutionarily conserved Tbx5-Wnt2/2b pathway orchestrates cardiopulmonary development., Steimle JD., Proc Natl Acad Sci U S A. November 6, 2018; 115 (45): E10615-E10624.
	Divergent axial morphogenesis and early shh expression in vertebrate prospective floor plate., Kremnyov S., Evodevo. January 31, 2018; 9 4.
	Evolutionary Proteomics Uncovers Ancient Associations of Cilia with Signaling Pathways., Sigg MA., Dev Cell. December 18, 2017; 43 (6): 744-762.e11.
	Sonic hedgehog antagonists reduce size and alter patterning of the frog inner ear., Zarei S., Dev Neurobiol. December 1, 2017; 77 (12): 1385-1400.
	A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates., Plouhinec JL., PLoS Biol. October 19, 2017; 15 (10): e2004045.
	Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing., Popov IK., Dev Biol. June 15, 2017; 426 (2): 429-441.
	Coordinating heart morphogenesis: A novel role for hyperpolarization-activated cyclic nucleotide-gated (HCN) channels during cardiogenesis in Xenopus laevis., Pitcairn E., Commun Integr Biol. May 10, 2017; 10 (3): e1309488.
	A novel role of the organizer gene Goosecoid as an inhibitor of Wnt/PCP-mediated convergent extension in Xenopus and mouse., Ulmer B., Sci Rep. February 21, 2017; 7 43010.
	Members of the Rusc protein family interact with Sufu and inhibit vertebrate Hedgehog signaling., Jin Z., Development. November 1, 2016; 143 (21): 3944-3955.
	Hedgehog-dependent E3-ligase Midline1 regulates ubiquitin-mediated proteasomal degradation of Pax6 during visual system development., Pfirrmann T., Proc Natl Acad Sci U S A. September 6, 2016; 113 (36): 10103-8.
	A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification., Rankin SA, Rankin SA., Cell Rep. June 28, 2016; 16 (1): 66-78.
	The ciliopathy-associated CPLANE proteins direct basal body recruitment of intraflagellar transport machinery., Toriyama M., Nat Genet. June 1, 2016; 48 (6): 648-56.
	Xenopus Limb bud morphogenesis., Keenan SR., Dev Dyn. March 1, 2016; 245 (3): 233-43.
	Making muscle: Morphogenetic movements and molecular mechanisms of myogenesis in Xenopus laevis., Sabillo A., Semin Cell Dev Biol. March 1, 2016; 51 80-91.
	G protein-coupled receptors Flop1 and Flop2 inhibit Wnt/β-catenin signaling and are essential for head formation in Xenopus., Miyagi A., Dev Biol. November 1, 2015; 407 (1): 131-44.
	At new heights - endodermal lineages in development and disease., Ober EA., Development. June 1, 2015; 142 (11): 1912-1917.
	A Molecular atlas of Xenopus respiratory system development., Rankin SA, Rankin SA., Dev Dyn. January 1, 2015; 244 (1): 69-85.
	Sulf1 influences the Shh morphogen gradient during the dorsal ventral patterning of the neural tube in Xenopus tropicalis., Ramsbottom SA., Dev Biol. July 15, 2014; 391 (2): 207-18.
	The chicken left right organizer has nonmotile cilia which are lost in a stage-dependent manner in the talpid(3) ciliopathy., Stephen LA., Genesis. June 1, 2014; 52 (6): 600-13.
	Developmental expression and role of Kinesin Eg5 during Xenopus laevis embryogenesis., Fernández JP., Dev Dyn. April 1, 2014; 243 (4): 527-40.
	FoxA4 favours notochord formation by inhibiting contiguous mesodermal fates and restricts anterior neural development in Xenopus embryos., Murgan S., PLoS One. January 1, 2014; 9 (10): e110559.
	Stabilization of speckle-type POZ protein (Spop) by Daz interacting protein 1 (Dzip1) is essential for Gli turnover and the proper output of Hedgehog signaling., Schwend T., J Biol Chem. November 8, 2013; 288 (45): 32809-32820.
	mRNA fluorescence in situ hybridization to determine overlapping gene expression in whole-mount mouse embryos., Neufeld SJ., Dev Dyn. September 1, 2013; 242 (9): 1094-100.
	The cytoskeletal protein Zyxin inhibits Shh signaling during the CNS patterning in Xenopus laevis through interaction with the transcription factor Gli1., Martynova NY., Dev Biol. August 1, 2013; 380 (1): 37-48.
	Islet1-expressing cardiac progenitor cells: a comparison across species., Pandur P., Dev Genes Evol. March 1, 2013; 223 (1-2): 117-29.
	Uncoupling VEGFA functions in arteriogenesis and hematopoietic stem cell specification., Leung A., Dev Cell. January 28, 2013; 24 (2): 144-58.
	An intact brachyury function is necessary to prevent spurious axial development in Xenopus laevis., Aguirre CE., PLoS One. January 1, 2013; 8 (1): e54777.
	Current perspectives of the signaling pathways directing neural crest induction., Stuhlmiller TJ., Cell Mol Life Sci. November 1, 2012; 69 (22): 3715-37.
	Characterization and expressional analysis of Dleu7 during Xenopus tropicalis embryogenesis., Zhu X., Gene. November 1, 2012; 509 (1): 77-84.
	Suppression of Bmp4 signaling by the zinc-finger repressors Osr1 and Osr2 is required for Wnt/β-catenin-mediated lung specification in Xenopus., Rankin SA, Rankin SA., Development. August 1, 2012; 139 (16): 3010-20.
	fus/TLS orchestrates splicing of developmental regulators during gastrulation., Dichmann DS., Genes Dev. June 15, 2012; 26 (12): 1351-63.

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