Papers associated with endomesoderm (and gsc)

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	Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions., Johnson K., BMC Genomics. October 23, 2022; 23 (1): 723.
	Evo-Devo of Urbilateria and its larval forms., De Robertis EM., Dev Biol. July 1, 2022; 487 10-20.
	Uncovering the mesendoderm gene regulatory network through multi-omic data integration., Jansen C., Cell Rep. February 15, 2022; 38 (7): 110364.
	Reduced Retinoic Acid Signaling During Gastrulation Induces Developmental Microcephaly., Gur M., Front Cell Dev Biol. January 1, 2022; 10 844619.
	Retinoic Acid is Required for Normal Morphogenetic Movements During Gastrulation., Gur M., Front Cell Dev Biol. January 1, 2022; 10 857230.
	Segregation of brain and organizer precursors is differentially regulated by Nodal signaling at blastula stage., Castro Colabianchi AM., Biol Open. February 25, 2021; 10 (2):
	Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network., Mukherjee S., Elife. September 7, 2020; 9
	Repression of Inappropriate Gene Expression in the Vertebrate Embryonic Ectoderm., Reich S., Genes (Basel). November 6, 2019; 10 (11):
	Tbx2 is required for the suppression of mesendoderm during early Xenopus development., Teegala S., Dev Dyn. July 1, 2018; 247 (7): 903-913.
	Maternal Gdf3 is an obligatory cofactor in Nodal signaling for embryonic axis formation in zebrafish., Bisgrove BW., Elife. November 15, 2017; 6
	Nodal/Activin Pathway is a Conserved Neural Induction Signal in Chordates., Le Petillon Y., Nat Ecol Evol. August 1, 2017; 1 (8): 1192-1200.
	Sorting at embryonic boundaries requires high heterotypic interfacial tension., Canty L., Nat Commun. July 31, 2017; 8 (1): 157.
	Id genes are essential for early heart formation., Cunningham TJ., Genes Dev. July 1, 2017; 31 (13): 1325-1338.
	Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing., Popov IK., Dev Biol. June 15, 2017; 426 (2): 429-441.
	A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM., Semin Cell Dev Biol. June 1, 2017; 66 12-24.
	Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis., Ding Y., Proc Natl Acad Sci U S A. April 11, 2017; 114 (15): E3081-E3090.
	Ascl1 represses the mesendoderm induction in Xenopus., Min Z., Acta Biochim Biophys Sin (Shanghai). November 1, 2016; 48 (11): 1006-1015.
	Specification of anteroposterior axis by combinatorial signaling during Xenopus development., Carron C., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.
	Sebox regulates mesoderm formation in early amphibian embryos., Chen G., Dev Dyn. November 1, 2015; 244 (11): 1415-26.
	E2a is necessary for Smad2/3-dependent transcription and the direct repression of lefty during gastrulation., Wills AE., Dev Cell. February 9, 2015; 32 (3): 345-57.
	Genome-wide view of TGFβ/Foxh1 regulation of the early mesendoderm program., Chiu WT., Development. December 1, 2014; 141 (23): 4537-47.
	Global identification of Smad2 and Eomesodermin targets in zebrafish identifies a conserved transcriptional network in mesendoderm and a novel role for Eomesodermin in repression of ectodermal gene expression., Nelson AC., BMC Biol. October 3, 2014; 12 81.
	EphA4-dependent Brachyury expression is required for dorsal mesoderm involution in the Xenopus gastrula., Evren S., Development. October 1, 2014; 141 (19): 3649-61.
	Two different network topologies yield bistability in models of mesoderm and anterior mesendoderm specification in amphibians., Brown LE., J Theor Biol. July 21, 2014; 353 67-77.
	Suv4-20h histone methyltransferases promote neuroectodermal differentiation by silencing the pluripotency-associated Oct-25 gene., Nicetto D., PLoS Genet. January 1, 2013; 9 (1): e1003188.
	Klf4 is required for germ-layer differentiation and body axis patterning during Xenopus embryogenesis., Cao Q., Development. November 1, 2012; 139 (21): 3950-61.
	Conservation and evolutionary divergence in the activity of receptor-regulated smads., Sorrentino GM., Evodevo. October 1, 2012; 3 (1): 22.
	The Mix family of homeobox genes--key regulators of mesendoderm formation during vertebrate development., Pereira LA., Dev Biol. July 15, 2012; 367 (2): 163-77.
	Dynamic in vivo binding of transcription factors to cis-regulatory modules of cer and gsc in the stepwise formation of the Spemann-Mangold organizer., Sudou N., Development. May 1, 2012; 139 (9): 1651-61.
	Cadherin-dependent differential cell adhesion in Xenopus causes cell sorting in vitro but not in the embryo., Ninomiya H., J Cell Sci. April 15, 2012; 125 (Pt 8): 1877-83.
	The cytoplasmic tyrosine kinase Arg regulates gastrulation via control of actin organization., Bonacci G., Dev Biol. April 1, 2012; 364 (1): 42-55.
	Ventx factors function as Nanog-like guardians of developmental potential in Xenopus., Scerbo P., PLoS One. January 1, 2012; 7 (5): e36855.
	High mobility group B proteins regulate mesoderm formation and dorsoventral patterning during zebrafish and Xenopus early development., Cao JM., Mech Dev. January 1, 2012; 129 (9-12): 263-74.
	An essential role for transcription before the MBT in Xenopus laevis., Skirkanich J., Dev Biol. September 15, 2011; 357 (2): 478-91.
	HEB and E2A function as SMAD/FOXH1 cofactors., Yoon SJ., Genes Dev. August 1, 2011; 25 (15): 1654-61.
	A gene regulatory network controlling hhex transcription in the anterior endoderm of the organizer., Rankin SA, Rankin SA., Dev Biol. March 15, 2011; 351 (2): 297-310.
	PDGF-A controls mesoderm cell orientation and radial intercalation during Xenopus gastrulation., Damm EW., Development. February 1, 2011; 138 (3): 565-75.
	Anterior neural development requires Del1, a matrix-associated protein that attenuates canonical Wnt signaling via the Ror2 pathway., Takai A., Development. October 1, 2010; 137 (19): 3293-302.
	Wnt/beta-catenin signaling is involved in the induction and maintenance of primitive hematopoiesis in the vertebrate embryo., Tran HT., Proc Natl Acad Sci U S A. September 14, 2010; 107 (37): 16160-5.
	Distinct Xenopus Nodal ligands sequentially induce mesendoderm and control gastrulation movements in parallel to the Wnt/PCP pathway., Luxardi G., Development. February 1, 2010; 137 (3): 417-26.
	Bistability in a model of mesoderm and anterior mesendoderm specification in Xenopus laevis., Middleton AM., J Theor Biol. September 7, 2009; 260 (1): 41-55.
	Non-redundant roles for Profilin2 and Profilin1 during vertebrate gastrulation., Khadka DK., Dev Biol. August 15, 2009; 332 (2): 396-406.
	Bestrophin genes are expressed in Xenopus development., Onuma Y., Biochem Biophys Res Commun. July 3, 2009; 384 (3): 290-5.
	Role of p21-activated kinase in cell polarity and directional mesendoderm migration in the Xenopus gastrula., Nagel M., Dev Dyn. July 1, 2009; 238 (7): 1709-26.
	Identification of a novel negative regulator of activin/nodal signaling in mesendodermal formation of Xenopus embryos., Cheong SM., J Biol Chem. June 19, 2009; 284 (25): 17052-60.
	Oct25 represses transcription of nodal/activin target genes by interaction with signal transducers during Xenopus gastrulation., Cao Y., J Biol Chem. December 5, 2008; 283 (49): 34168-77.
	Mechanism of activation of the Formin protein Daam1., Liu W., Proc Natl Acad Sci U S A. January 8, 2008; 105 (1): 210-5.
	The opposing homeobox genes Goosecoid and Vent1/2 self-regulate Xenopus patterning., Sander V., EMBO J. June 20, 2007; 26 (12): 2955-65.
	ANR5, an FGF target gene product, regulates gastrulation in Xenopus., Chung HA., Curr Biol. June 5, 2007; 17 (11): 932-9.
	Evolution of axis specification mechanisms in jawed vertebrates: insights from a chondrichthyan., Coolen M., PLoS One. April 18, 2007; 2 (4): e374.

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