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Summary Stage Literature (2084) Attributions Wiki
XB-STAGE-7

Papers associated with gastrula stage

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Segregation of brain and organizer precursors is differentially regulated by Nodal signaling at blastula stage., Castro Colabianchi AM, Tavella MB, Boyadjián López LE, Rubinstein M, Franchini LF, López SL., Biol Open. February 25, 2021; 10 (2):                 


Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR, van Genesen S, Li Q, Grasso A, Frölich S, van der Sande M, van Heeringen SJ, Veenstra GJC., EMBO J. February 8, 2021; e104913.                        


Rab11fip5 regulates telencephalon development via ephrinB1 recycling., Yoon J, Garo J, Lee M, Sun J, Hwang YS, Daar IO., Development. February 2, 2021; 148 (3):                                                             


Purified Bighead protein efficiently promotes head development in the South African clawed frog, Xenopus laevis., Colozza G., MicroPubl Biol. January 5, 2021; 2021   


Establishing embryonic territories in the context of Wnt signaling., Velloso I, Maia LA, Amado NG, Reis AH, He X, Abreu JG., Int J Dev Biol. January 1, 2021; 65 (4-5-6): 227-233.      


Ectoderm to mesoderm transition by down-regulation of actomyosin contractility., Kashkooli L, Rozema D, Espejo-Ramirez L, Lasko P, Fagotto F., PLoS Biol. January 1, 2021; 19 (1): e3001060.                                            


Xenopus gpx3 Mediates Posterior Development by Regulating Cell Death during Embryogenesis., Lee H, Ismail T, Kim Y, Chae S, Ryu HY, Lee DS, Kwon TK, Park TJ, Kwon T, Lee HS., Antioxidants (Basel). December 12, 2020; 9 (12):           


Hes5.9 Coordinate FGF and Notch Signaling to Modulate Gastrulation via Regulating Cell Fate Specification and Cell Migration in Xenopus tropicalis., Huang X, Zhang L, Yang S, Zhang Y, Wu M, Chen P., Genes (Basel). November 18, 2020; 11 (11):                   


Tbx2 mediates dorsal patterning and germ layer suppression through inhibition of BMP/GDF and Activin/Nodal signaling., Reich S, Kayastha P, Teegala S, Weinstein DC., BMC Mol Cell Biol. May 28, 2020; 21 (1): 39.              


A comparative analysis of fibroblast growth factor receptor signalling during Xenopus development., Brunsdon H, Isaacs HV., Biol Cell. May 1, 2020; 112 (5): 127-139.                


Role of TrkA signaling during tadpole tail regeneration and early embryonic development in Xenopus laevis., Iimura A, Nishida E, Kusakabe M., Genes Cells. February 1, 2020; 25 (2): 86-99.                


CFAP43 modulates ciliary beating in mouse and Xenopus., Rachev E, Schuster-Gossler K, Fuhl F, Ott T, Tveriakhina L, Beckers A, Hegermann J, Boldt K, Mai M, Kremmer E, Ueffing M, Blum M, Gossler A., Dev Biol. January 1, 2020; 459 (2): 109-125.                                                                    


The tumor suppressor PTPRK promotes ZNRF3 internalization and is required for Wnt inhibition in the Spemann organizer., Chang LS, Kim M, Glinka A, Reinhard C, Niehrs C., Elife. January 1, 2020; 9                                                                                               


Mesoderm and endoderm internalization in the Xenopus gastrula., Winklbauer R., Curr Top Dev Biol. January 1, 2020; 136 243-270.


The regulatory proteins DSCR6 and Ezh2 oppositely regulate Stat3 transcriptional activity in mesoderm patterning during Xenopus development., Loreti M, Shi DL, Carron C., J Biol Chem. January 1, 2020; 295 (9): 2724-2735.                


An in vivo brain-bacteria interface: the developing brain as a key regulator of innate immunity., Herrera-Rincon C, Paré JF, Martyniuk CJ, Jannetty SK, Harrison C, Fischer A, Dinis A, Keshari V, Novak R, Levin M., NPJ Regen Med. January 1, 2020; 5 2.                        


14-3-3 targets keratin intermediate filaments to mechanically sensitive cell-cell contacts., Mariani RA, Paranjpe S, Dobrowolski R, Weber GF., Mol Biol Cell. January 1, 2020; 31 (9): 930-943.              


Chromatin accessibility and histone acetylation in the regulation of competence in early development., Esmaeili M, Blythe SA, Tobias JW, Zhang K, Yang J, Klein PS., Dev Biol. January 1, 2020; 462 (1): 20-35.


Mcl1 protein levels and Caspase-7 executioner protease control axial organizer cells survival., Sena E, Bou-Rouphael J, Rocques N, Carron-Homo C, Durand BC., Dev Dyn. January 1, 2020; 249 (7): 847-866.              


Modeling Bainbridge-Ropers Syndrome in Xenopus laevis Embryos., Lichtig H, Artamonov A, Polevoy H, Reid CD, Bielas SL, Frank D., Front Physiol. January 1, 2020; 11 75.                    


Quantitative capillary zone electrophoresis-mass spectrometry reveals the N-glycome developmental plan during vertebrate embryogenesis., Qu Y, Dubiak KM, Peuchen EH, Champion MM, Zhang Z, Hebert AS, Wright S, Coon JJ, Huber PW, Dovichi NJ., Mol Omics. January 1, 2020; 16 (3): 210-220.


Tunicate gastrulation., Winkley KM, Kourakis MJ, DeTomaso AW, Veeman MT, Smith WC., Curr Top Dev Biol. January 1, 2020; 136 219-242.


Mechanical Stress Regulates Epithelial Tissue Integrity and Stiffness through the FGFR/Erk2 Signaling Pathway during Embryogenesis., Kinoshita N, Hashimoto Y, Yasue N, Suzuki M, Suzuki M, Cristea IM, Ueno N., Cell Rep. January 1, 2020; 30 (11): 3875-3888.e3.                


Natural size variation among embryos leads to the corresponding scaling in gene expression., Leibovich A, Edri T, Klein SL, Moody SA, Fainsod A., Dev Biol. January 1, 2020; 462 (2): 165-179.                    


A direct role for SNX9 in the biogenesis of filopodia., Jarsch IK, Gadsby JR, Nuccitelli A, Mason J, Shimo H, Pilloux L, Marzook B, Mulvey CM, Dobramysl U, Bradshaw CR, Lilley KS, Hayward RD, Vaughan TJ, Dobson CL, Gallop JL., J Cell Biol. January 1, 2020; 219 (4):               


Effect of nano-encapsulation of β-carotene on Xenopus laevis embryos development (FETAX)., Battistoni M, Bacchetta R, Di Renzo F, Metruccio F, Menegola E., Toxicol Rep. January 1, 2020; 7 510-519.                  


Brachyury in the gastrula of basal vertebrates., Bruce AEE, Winklbauer R., Mech Dev. January 1, 2020; 163 103625.


Sprouty2 regulates positioning of retinal progenitors through suppressing the Ras/Raf/MAPK pathway., Sun J, Yoon J, Lee M, Hwang YS, Daar IO., Sci Rep. January 1, 2020; 10 (1): 13752.                      


Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network., Mukherjee S, Chaturvedi P, Rankin SA, Rankin SA, Fish MB, Wlizla M, Paraiso KD, MacDonald M, Chen X, Weirauch MT, Blitz IL, Cho KW, Zorn AM., Elife. January 1, 2020; 9                       


TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis., Chen M, Amado N, Tan J, Reis A, Ge M, Abreu JG, He X., Elife. January 1, 2020; 9                                                                                           


Foxd4l1.1 negatively regulates transcription of neural repressor ventx1.1 during neuroectoderm formation in Xenopus embryos., Kumar S, Kumar S, Umair Z, Kumar V, Kumar S, Lee U, Kim J., Sci Rep. January 1, 2020; 10 (1): 16780.            


Non-junctional role of Cadherin3 in cell migration and contact inhibition of locomotion via domain-dependent, opposing regulation of Rac1., Ichikawa T, Stuckenholz C, Davidson LA., Sci Rep. January 1, 2020; 10 (1): 17326.          


R-spondins are BMP receptor antagonists in Xenopus early embryonic development., Lee H, Seidl C, Sun R, Glinka A, Niehrs C., Nat Commun. January 1, 2020; 11 (1): 5570.                                            


Dact-4 is a Xenopus laevis Spemann organizer gene related to the Dapper/Frodo antagonist of β-catenin family of proteins., Colozza G, De Robertis EM., Gene Expr Patterns. January 1, 2020; 38 119153.                        


Recent evolution of a TET-controlled and DPPA3/STELLA-driven pathway of passive DNA demethylation in mammals., Mulholland CB, Nishiyama A, Ryan J, Nakamura R, Yiğit M, Glück IM, Trummer C, Qin W, Bartoschek MD, Traube FR, Parsa E, Ugur E, Modic M, Acharya A, Stolz P, Ziegenhain C, Wierer M, Enard W, Carell T, Lamb DC, Takeda H, Nakanishi M, Bultmann S, Leonhardt H., Nat Commun. January 1, 2020; 11 (1): 5972.                


Polybrominated Diphenylether (DE-71) Exposure Skews Phenotypic Sex Ratio, and Alters Steroid Hormone Levels and Steroidogenic Enzyme Activities in Juvenile Silurana tropicalis., Fort DJ, Mathis M, Fort C, Fort TD, Guiney PD, Weeks JA., Toxicol Sci. August 8, 2019;


Cdc2-like kinase 2 (Clk2) promotes early neural development in Xenopus embryos., Virgirinia RP, Jahan N, Okada M, Takebayashi-Suzuki K, Yoshida H, Nakamura M, Akao H, Yoshimoto Y, Fatchiyah F, Ueno N, Suzuki A, Suzuki A., Dev Growth Differ. August 1, 2019; 61 (6): 365-377.                              


The Spatiotemporal Control of Zygotic Genome Activation., Gentsch GE, Owens NDL, Smith JC., iScience. June 28, 2019; 16 485-498.                          


A deficiency in SUMOylation activity disrupts multiple pathways leading to neural tube and heart defects in Xenopus embryos., Bertke MM, Dubiak KM, Cronin L, Zeng E, Huber PW., BMC Genomics. May 17, 2019; 20 (1): 386.              


Nucleotide receptor P2RY4 is required for head formation via induction and maintenance of head organizer in Xenopus laevis., Harata A, Hirakawa M, Sakuma T, Yamamoto T, Hashimoto C., Dev Growth Differ. February 1, 2019; 61 (2): 186-197.                                


Expression of the hormonal FGF co-receptor Klotho beta in the Xenopus laevis model., Chen G, Tao Q., Cell Biol Int. February 1, 2019; 43 (2): 207-213.


Einsteck Transplants., Cousin H., Cold Spring Harb Protoc. January 1, 2019; 2019 (2):


Spemann-Mangold Grafts., Cousin H., Cold Spring Harb Protoc. January 1, 2019; 2019 (2):


Analysis of Cell Fate Commitment in Xenopus Embryos., Moody SA., Cold Spring Harb Protoc. January 1, 2019; 2019 (1):


Comprehensive analysis of formin localization in Xenopus epithelial cells., Higashi T, Stephenson RE, Miller AL, Miller AL., Mol Biol Cell. January 1, 2019; 30 (1): 82-95.                                


Xenopus slc7a5 is essential for notochord function and eye development., Katada T, Sakurai H., Mech Dev. January 1, 2019; 155 48-59.                


Non-acylated Wnts Can Promote Signaling., Speer KF, Sommer A, Tajer B, Mullins MC, Klein PS, Lemmon MA., Cell Rep. January 1, 2019; 26 (4): 875-883.e5.                  


Retinoic acid signaling reduction recapitulates the effects of alcohol on embryo size., Shukrun N, Shabtai Y, Pillemer G, Fainsod A., Genesis. January 1, 2019; 57 (7-8): e23284.                


Evolution of the Rho guanine nucleotide exchange factors Kalirin and Trio and their gene expression in Xenopus development., Kratzer MC, England L, Apel D, Hassel M, Borchers A., Gene Expr Patterns. January 1, 2019; 32 18-27.                              


The Frog Xenopus as a Model to Study Joubert Syndrome: The Case of a Human Patient With Compound Heterozygous Variants in PIBF1., Ott T, Kaufmann L, Granzow M, Hinderhofer K, Bartram CR, Theiß S, Seitz A, Paramasivam N, Schulz A, Moog U, Blum M, Evers CM., Front Physiol. January 1, 2019; 10 134.                

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