Papers associated with endoderm (and mixer)

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	Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E., Nat Commun. November 5, 2022; 13 (1): 6681.
	Nascent transcriptome reveals orchestration of zygotic genome activation in early embryogenesis., Chen H., Curr Biol. October 10, 2022; 32 (19): 4314-4324.e7.
	Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR., EMBO J. May 3, 2021; 40 (9): e104913.
	Modeling endoderm development and disease in Xenopus., Edwards NA., Curr Top Dev Biol. January 1, 2021; 145 61-90.
	Dusp1 modulates activin/smad2 mediated germ layer specification via FGF signal inhibition in Xenopus embryos., Umair Z., Anim Cells Syst (Seoul). November 27, 2020; 24 (6): 359-370.
	Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation., Paraiso KD., Cell Rep. June 4, 2019; 27 (10): 2962-2977.e5.
	A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo., Blitz IL., Dev Biol. June 15, 2017; 426 (2): 409-417.
	A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM., Semin Cell Dev Biol. June 1, 2017; 66 12-24.
	Sebox regulates mesoderm formation in early amphibian embryos., Chen G., Dev Dyn. November 1, 2015; 244 (11): 1415-26.
	PV.1 induced by FGF-Xbra functions as a repressor of neurogenesis in Xenopus embryos., Yoon J., BMB Rep. December 1, 2014; 47 (12): 673-8.
	Two different network topologies yield bistability in models of mesoderm and anterior mesendoderm specification in amphibians., Brown LE., J Theor Biol. July 21, 2014; 353 67-77.
	Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns., Zheng Z., BMC Syst Biol. January 8, 2014; 8 3.
	Klf4 is required for germ-layer differentiation and body axis patterning during Xenopus embryogenesis., Cao Q., Development. November 1, 2012; 139 (21): 3950-61.
	The Mix family of homeobox genes--key regulators of mesendoderm formation during vertebrate development., Pereira LA., Dev Biol. July 15, 2012; 367 (2): 163-77.
	A developmental requirement for HIRA-dependent H3.3 deposition revealed at gastrulation in Xenopus., Szenker E., Cell Rep. June 28, 2012; 1 (6): 730-40.
	Dynamic in vivo binding of transcription factors to cis-regulatory modules of cer and gsc in the stepwise formation of the Spemann-Mangold organizer., Sudou N., Development. May 1, 2012; 139 (9): 1651-61.
	Xenopus Nanos1 is required to prevent endoderm gene expression and apoptosis in primordial germ cells., Lai F., Development. April 1, 2012; 139 (8): 1476-86.
	Transcriptional activation by Oct4 is sufficient for the maintenance and induction of pluripotency., Hammachi F., Cell Rep. February 23, 2012; 1 (2): 99-109.
	Ventx factors function as Nanog-like guardians of developmental potential in Xenopus., Scerbo P., PLoS One. January 1, 2012; 7 (5): e36855.
	mNanog possesses dorsal mesoderm-inducing ability by modulating both BMP and Activin/nodal signaling in Xenopus ectodermal cells., Miyazaki A., PLoS One. January 1, 2012; 7 (10): e46630.
	An essential role for transcription before the MBT in Xenopus laevis., Skirkanich J., Dev Biol. September 15, 2011; 357 (2): 478-91.
	xCITED2 Induces Neural Genes in Animal Cap Explants of Xenopus Embryos., Yoon J., Exp Neurobiol. September 1, 2011; 20 (3): 123-9.
	HEB and E2A function as SMAD/FOXH1 cofactors., Yoon SJ., Genes Dev. August 1, 2011; 25 (15): 1654-61.
	Early activation of FGF and nodal pathways mediates cardiac specification independently of Wnt/beta-catenin signaling., Samuel LJ., PLoS One. October 28, 2009; 4 (10): e7650.
	CDK9/cyclin complexes modulate endoderm induction by direct interaction with Mix.3/mixer., Zhu H., Dev Dyn. June 1, 2009; 238 (6): 1346-57.
	Bmp signaling is necessary and sufficient for ventrolateral endoderm specification in Xenopus., Wills A., Dev Dyn. August 1, 2008; 237 (8): 2177-86.
	Retinoic acid-mediated patterning of the pre-pancreatic endoderm in Xenopus operates via direct and indirect mechanisms., Pan FC., Mech Dev. August 1, 2007; 124 (7-8): 518-31.
	Hex acts with beta-catenin to regulate anteroposterior patterning via a Groucho-related co-repressor and Nodal., Zamparini AL., Development. September 1, 2006; 133 (18): 3709-22.
	Global analysis of the transcriptional network controlling Xenopus endoderm formation., Sinner D., Development. May 1, 2006; 133 (10): 1955-66.
	The RNA-binding protein, Vg1RBP, is required for pancreatic fate specification., Spagnoli FM., Dev Biol. April 15, 2006; 292 (2): 442-56.
	Cooperative non-cell and cell autonomous regulation of Nodal gene expression and signaling by Lefty/Antivin and Brachyury in Xenopus., Cha YR., Dev Biol. February 15, 2006; 290 (2): 246-64.
	Genomic profiling of mixer and Sox17beta targets during Xenopus endoderm development., Dickinson K., Dev Dyn. February 1, 2006; 235 (2): 368-81.
	The Vg1-related protein Gdf3 acts in a Nodal signaling pathway in the pre-gastrulation mouse embryo., Chen C., Development. January 1, 2006; 133 (2): 319-29.
	Determination of the minimal domains of Mix.3/Mixer required for endoderm development., Doherty JR., Mech Dev. January 1, 2006; 123 (1): 56-66.
	Wnt5 signaling in vertebrate pancreas development., Kim HJ., BMC Biol. October 24, 2005; 3 23.
	Germ-layer specification and control of cell growth by Ectodermin, a Smad4 ubiquitin ligase., Dupont S., Cell. April 8, 2005; 121 (1): 87-99.
	SOX7 is an immediate-early target of VegT and regulates Nodal-related gene expression in Xenopus., Zhang C., Dev Biol. February 15, 2005; 278 (2): 526-41.
	Refinement of gene expression patterns in the early Xenopus embryo., Wardle FC., Development. October 1, 2004; 131 (19): 4687-96.
	Repression of nodal expression by maternal B1-type SOXs regulates germ layer formation in Xenopus and zebrafish., Zhang C., Dev Biol. September 1, 2004; 273 (1): 23-37.
	Sox17 and beta-catenin cooperate to regulate the transcription of endodermal genes., Sinner D., Development. July 1, 2004; 131 (13): 3069-80.
	The role of Mixer in patterning the early Xenopus embryo., Kofron M., Development. May 1, 2004; 131 (10): 2431-41.
	Inhibition of FGF signaling causes expansion of the endoderm in Xenopus., Cha SW., Biochem Biophys Res Commun. February 27, 2004; 315 (1): 100-6.
	The Mix family homeodomain gene bonnie and clyde functions with other components of the Nodal signaling pathway to regulate neural patterning in zebrafish., Trinh LA., Development. October 1, 2003; 130 (20): 4989-98.
	Regulation of apoptosis in theXenopus embryo by Bix3., Trindade M., Development. October 1, 2003; 130 (19): 4611-22.
	Induction of cardiomyocytes by GATA4 in Xenopus ectodermal explants., Latinkić BV., Development. August 1, 2003; 130 (16): 3865-76.
	Molecular components of the endoderm specification pathway in Xenopus tropicalis., D'Souza A., Dev Dyn. January 1, 2003; 226 (1): 118-27.
	Mezzo, a paired-like homeobox protein is an immediate target of Nodal signalling and regulates endoderm specification in zebrafish., Poulain M., Development. November 1, 2002; 129 (21): 4901-14.
	Molecular regulation of vertebrate early endoderm development., Shivdasani RA., Dev Biol. September 15, 2002; 249 (2): 191-203.
	Overexpression of the secreted factor Mig30 expressed in the Spemann organizer impairs morphogenetic movements during Xenopus gastrulation., Hayata T., Mech Dev. March 1, 2002; 112 (1-2): 37-51.
	TGF-beta signalling pathways in early Xenopus development., Hill CS., Curr Opin Genet Dev. October 1, 2001; 11 (5): 533-40.

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