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Figure 5. REPFIND analysis of dendritic mRNAs CamKIIα and Arc. The 3'-UTR of rat Arc (Acc. #NM_019361) and human CamKIIα (Acc. #BC012321) were analyzed for all repeats. As can be seen, CAG or CAG-containing motifs comprise the top scoring cluster for each 3'-UTR. Motifs depicted as vertical small colored bars indicate the cluster with the most significant P-value. The red bars below each 3'-UTR represent RNA sequences that have dendritic RNA localization activity and were mapped in previous studies using reporter assays [28, 29].

Image published in: Andken BB et al. (2007)

Copyright © 2007 Andken et al; licensee BioMed Central Ltd. This image is reproduced with permission of the journal and the copyright holder. This is an open-access article distributed under the terms of the Creative Commons Attribution license

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