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Figure 2. The improved performance of the conservation strategy.The performances of the conservation strategy and miRNA target prediction algorithms were evaluated by (A) precision and (B) F-measure. There are three algorithms (TS: TargetScan, MD: miRanda, and MT: MultiMiTar) and three combinations (IntSec: intersection, Union: union, and IntSec(hsa): intersection in humans with unions in other reference species). The results from the original algorithms/combinations were labeled “Predicted” (the left side of the dashed line). The results of the conserved miRNA-mRNA interactions identified by our strategy were labeled “Conserved” (the right side of the dashed line). The numbers along the X-axis indicate the conservation level of the conserved miRNA-mRNA interactions. Both the precision and F-measure are improved after applying the proposed conservation strategy. In two plots (2A and 2B), MD and union nearly overlap. Image published in: Lin CC et al. (2014) Image reproduced on Xenbase with permission of the publisher and the copyright holder. This image is reproduced with permission of the journal and the copyright holder. This is an open-access article distributed under the terms of the Creative Commons Attribution license Larger Image Printer Friendly View |