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XB-IMG-148944

Xenbase Image ID: 148944


Fig S3 – Spatial expression of selected genes by in situ, related to Fig 1 All panels give Clutch A PolyA+ (circles), Clutch B PolyA+ (triangles) and Gaussian Process median line and 95% confidence intervals. Numbers on in situ images indicate the Gaussian process median number of transcripts for the given stage. (A) Genes involved in muscle induction. (B) Genes with onset midway through the timecourse. (C) Genes with onset late in the timecourse.

Image published in: Owens ND et al. (2016)

Copyright © 2016. Image reproduced on Xenbase with permission of the publisher and the copyright holder. This is an Open Access article distributed under the terms of the Creative Commons Attribution License.

GeneCloneSynonymsSpeciesStage(s)Tissue
myf5 Xmyf5, Xmyf-5, myf-5X.tropicalisThroughout NF stage 11dorso-lateral marginal zone
myf5 Xmyf5, Xmyf-5, myf-5X.tropicalisSometime during NF stage 12 to NF stage 14paraxial mesoderm
myf5 Xmyf5, Xmyf-5, myf-5X.tropicalisSometime during NF stage 23 to NF stage 28myoblast
tbxt Xbra, X-bra, bra, Xbrachyury, brachyury, ntl, t-a, t-b, tX.tropicalisSometime during NF stage 9 to NF stage 11marginal zone
tbxt Xbra, X-bra, bra, Xbrachyury, brachyury, ntl, t-a, t-b, tX.tropicalisSometime during NF stage 12 to NF stage 19mesoderm
tbxt Xbra, X-bra, bra, Xbrachyury, brachyury, ntl, t-a, t-b, tX.tropicalisSometime during NF stage 23 to NF stage 28circumblastoporal collar
myod1 myogenic factor 3, MyoD, XtmyoD, XMyoD, mf25, myod1-b, myod1-aX.tropicalisSometime during NF stage 11 to NF stage 23presomitic mesoderm
myod1 myogenic factor 3, MyoD, XtmyoD, XMyoD, mf25, myod1-b, myod1-aX.tropicalisSometime during NF stage 23 to NF stage 28somite
act3 muscle actin, MA, ac100, skeletal actin, femoral actinX.tropicalisSometime during NF stage 12.5 to NF stage 19presomitic mesoderm
act3 muscle actin, MA, ac100, skeletal actin, femoral actinX.tropicalisSometime during NF stage 23 to NF stage 28somite
ankrd2 arpp, ankrd2-a, ankrd2-bX.tropicalisSometime during NF stage 23 to NF stage 28muscle
col3a1 X.tropicalisSometime during NF stage 19 to NF stage 29 and 30melanophore
g6pc2 igrpX.tropicalisSometime during NF stage 21 to NF stage 29 and 30alimentary system
hbe1 hbeX.tropicalisSometime during NF stage 23 to NF stage 29 and 30ventral blood island
ctrl X.tropicalisSometime during NF stage 15 to NF stage 19neural plate
ctrl X.tropicalisSometime during NF stage 29 and 30 to NF stage 39foregut
ctrl X.tropicalisSometime during NF stage 41 to NF stage 43pancreas
dorsal pancreatic bud
ventral pancreatic bud
ctrb1 ctrb, chymotrypsinogen BX.tropicalisSometime during NF stage 29 and 30 to NF stage 39head
foregut
ctrb1 ctrb, chymotrypsinogen BX.tropicalisSometime during NF stage 41 to NF stage 43pancreas
dorsal pancreatic bud
ventral pancreatic bud
cpb1 X.tropicalisSometime during NF stage 41 to NF stage 43pancreas
dorsal pancreatic bud
ventral pancreatic bud
mep1a X.tropicalisSometime during NF stage 39 to NF stage 40head
mep1a X.tropicalisSometime during NF stage 41 to NF stage 43alimentary system
thdl18 gene 18X.tropicalisSometime during NF stage 39 to NF stage 41eye
fin
thdl18 gene 18X.tropicalisThroughout NF stage 43fin
ventral
ace2 X.tropicalisThroughout NF stage 43alimentary system
mep1b X.tropicalisSometime during NF stage 41 to NF stage 43alimentary system
thdl17 gene 17X.tropicalisSometime during NF stage 41 to NF stage 43eye

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