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Fig. 1. Criteria and examples of transcriptome correlation analysis. (A) Criteria for categorization of homeologous gene expression. See Materials and Methods for details. All results are presented in Suppl. Data3. (B-E) Examples of four groups. Group names are presented in each graph. In case of inconsistencies, group names in different clutches are presented separately. (B) ctnnb1.L (β-catenin.L) and ctnnb1.S (β-catenin.S) showed quite similar expression patterns (HCSE). (C) maml1.L showed highly correlated, but stronger expression than maml1.S throughout developmental stages (st8-12) (HCDE). (D) sdc4.L and sdc4.S showed different expression patterns during development (NCSE). (E) numbl. L showed stronger expression than numbl.S and the two expression patterns are quite different throughout developmental stages. (F) An example of inconsistent categories between clutches. frat1.S was expressed at higher levels than frat1.L during development in Clutch T (HCDE), but both showed similar expression levels in Clutch U (HCSE). Line graphs show expression levels of genes during oogenesis and embryogenesis. Magenta, L genes; Blue, S genes; circles, Clutch T; triangles, Clutch U.

Image published in: Michiue T et al. (2017)

Copyright © 2017. Image reproduced with permission of the Publisher, Elsevier B. V.

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