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Xenbase Image ID: 172917

Fig. 2. Phylogenetic relationship of vertebrate Pou3f proteins. Phylogenetic tree of the Pou3f family based on sequences from human (Homo sapiens, Hs), mouse (Mus musculus, Mm), chicken (Gallus gallus, Gg), African clawed frog (Xenopus laevis, Xl), zebrafish (Danio rerio, Dr), medaka (Oryzias latipes, Ol), Japanese puffer (Takifugu rubripes, Tr), spotted gar (Lepisosteus oculatus, Lo), Florida amphioxus (Branchiostoma floridae, Bf), and the purple sea urchin (Strongylocentrotus purpuratus, Sp). The Pou3f1, Pou3f2, Pou3f3, and Pou3f4 subfamilies are respectively highlighted in blue, green, yellow, and orange. The tree was rooted with members of the Pou4f1 subfamily. Although trees were calculated using both the Maximum Likelihood (ML) and Bayesian Inference (BI) methods, only the ML tree is shown, with branch lengths being representative of sequence substitution rates. Branch support is indicated as bootstrap percentages from the ML analysis (ranging from 0 to 100) / posterior probabilities (ranging from 0 to 1) from the BI analysis. “--” indicates that the branching patterns of the ML and BI analyses diverged at this node and that one of the scores is thus unavailable.

Image published in: Cosse-Etchepare C et al. (2018)

Copyright © 2018. Reproduced with permission of the Publisher, University of the Basque Country Press.

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