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XB-IMG-26316

Xenbase Image ID: 26316


Fig. 1. Expression pattern of Xenopus laevis Irx genes. (A1–5) Vegetal views at early gastrula show that Irx1 (A1) and Irx3 (A3) are expressed in two dorso-lateral mesodermal bands (arrowhead). In addition, Irx1 and Irx2 are expressed in the presumptive neural ectoderm (A1 and A2, insets). (B1–5) Dorsal views of early neurula embryos illustrating the similar expression domains of all Irx genes (n, notochord). Arrowheads in (B1) and (B2) point at the placodal expression of Irx1 and Irx2. (C1) Early neurula embryo double-stained for Six3 (purple) and Irx1 (cyan) genes. The expression patterns of these genes are separated a few cell diameters (arrowheads). (C2–C5) Early neurula embryo double-stained for Irx genes (purple) and Fezf2 (cyan). Inset in (C2) show a similar embryo double-stained for Irx1 (purple) and Fezf2 (cyan). Insets in (C3–5) show double in situs developed in a single colour (purple) for Fezf2 and Irx3 (C3), Irx4 (C4) and Irx4 (C5). All Irx genes show similar anterior border abutting Fezf expression (arrowheads). (D1, D2) Double staining for Irx1 and Irx2 (D1) or Irx3 (D2) also show that these genes share their anterior expression limit (arrowheads). (D3, D4). This border is rostral to Pax2, as shown in double-stained embryos for this gene and Irx1 (D3) or Irx3 (D4). Inset in (D3) show a sagittal section of a double-labelled embryo for Pax2 (purple) and Irx1 (cyan). Note that Irx1 is anterior to that of Pax2. (D5) The Irx anterior limit overlaps with the posterior expression of Pax6 in the forebrain. (E1–G5) At tailbud stage, in lateral views (E1–5) or in dorsal views (F1–5, G1–5) all Irx genes show similar expression patterns in the brain although with different intensities in different regions. This is more clearly seen in double-stained embryos for Irx genes (purple) and Krox20 (cyan) (G1–G5). Red, black and blue arrowheads point at the M/H boundary, rhombomere 3 (r3) and rhombomere 5, respectively. Green arrowheads and red arrows point at the otic vesicle and pronephros, respectively. Stg, stage.

Image published in: Rodríguez-Seguel E et al. (2009)

Copyright © 2009. Image reproduced with permission of the Publisher, Elsevier B. V.

GeneSynonymsSpeciesStage(s)Tissue
irx2.LIro2, MGC89388, Xiro2X. laevisThroughout NF stage 10ectoderm
neuroectoderm
irx1.Liro, irx1-a, irx1-b, Xiro, Xiro1X. laevisThroughout NF stage 10mesoderm
presumptive ectoderm
dorso-lateral marginal zone
irx3.Lirx3b, MGC131103, xiro-3, xiro3X. laevisThroughout NF stage 10mesoderm
dorso-lateral marginal zone
irx1.Liro, irx1-a, irx1-b, Xiro, Xiro1X. laevisSometime during NF stage 14 to NF stage 15midbrain
posterior placodal area
anterior placodal area
chordal neural plate
pre-chordal neural plate
irx2.LIro2, MGC89388, Xiro2X. laevisThroughout NF stage 14 to NF stage 15hindbrain
intermediate mesoderm
cardiac mesoderm
anterior placodal area
neural plate
irx3.Lirx3b, MGC131103, xiro-3, xiro3X. laevisSometime during NF stage 14 to NF stage 15neural plate
presumptive midbrain-hindbrain boundary
irx4.Liroquois-4, irx4-a, irx4-b, irxa3, Xiro4X. laevisSometime during NF stage 14 to NF stage 15chordal neural plate
presumptive midbrain-hindbrain boundary
posterior placodal area
irx5.Liroquois-5, Xiro5X. laevisSometime during NF stage 14 to NF stage 15chordal neural plate
presumptive midbrain-hindbrain boundary
pax6.Lan2, mgda, pax-6, pax6-a, pax6-b, wagr, XLPAX6, xpax6X. laevisSometime during NF stage 14 to NF stage 15neural plate
anterior neural fold
anterior neural ridge
fezf2.LX. laevisSometime during NF stage 14 to NF stage 15anterior neural fold
anterior neural ridge
pax2.LLOC108697493, pax-2, pax2-a, pax2-b, XPax-2, XPax2X. laevisSometime during NF stage 14 to NF stage 15neural plate
presumptive midbrain-hindbrain boundary
six3.Lhpe2, six3-a, six3-b, XSix3, xsix3.1, xsix3.2X. laevisSometime during NF stage 14 to NF stage 15anterior neural fold
anterior neural ridge
irx1.Liro, irx1-a, irx1-b, Xiro, Xiro1X. laevisThroughout NF stage 26otic placode
branchial arch
heart primordium
pronephric mesenchyme
midbrain
hindbrain
cranial neural crest
mandibular crest
hyoid crest
anterior branchial crest
posterior branchial crest
diencephalon
irx2.LIro2, MGC89388, Xiro2X. laevisThroughout NF stage 26brain
otic placode
pharyngeal arch
heart primordium
midbrain
hindbrain
rhombomere R3
irx3.Lirx3b, MGC131103, xiro-3, xiro3X. laevisThroughout NF stage 26pharyngeal arch
otic placode
heart primordium
pronephric mesenchyme
midbrain
hindbrain
spinal cord
irx4.Liroquois-4, irx4-a, irx4-b, irxa3, Xiro4X. laevisThroughout NF stage 26heart primordium
pharyngeal arch
otic placode
middle lateral line
lateral line placode
midbrain
hindbrain
rhombomere R3
glossopharyngeal nerve
vagus nerve
irx5.Liroquois-5, Xiro5X. laevisThroughout NF stage 26heart primordium
eye
otic placode
pharyngeal arch
midbrain
hindbrain
spinal cord
irx5.Liroquois-5, Xiro5X. laevisThroughout NF stage 10 
irx4.Liroquois-4, irx4-a, irx4-b, irxa3, Xiro4X. laevisThroughout NF stage 10 

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