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XB-IMG-82040

Xenbase Image ID: 82040


Fig. 3. Whole mount in situ hybridizations, sequence similarities and functional classifications. The left-most part represents the results of sequence similarity searches from 273 partially sequenced cDNAs representing unique, differentially expressed genes: clone name; accession number of best hit, P-value; name of best hit; functional classification. The order of the genes follows first digit sorting, e.g. 1, 10, 2, 20 etc. Abbreviations: o, orphan genes; m, metabolism gene; r, developmental regulator gene; r?, housekeeping regulator gene; s, structural gene; Xl, known Xenopus gene; +, GRAIL1 good coding potential; ++, GRAIL1 excellent coding potential. The P-value is the probability provided by the BLAST programme and calculated using Karlinltschul statistics, that the sequence similarity is due to randomness. For EST hits, the similarities derived from the comparison of the EST or cluster of EST sequences is given. The right-most part shows in situ hybridizations results for stages 10+, 13 and 30. Abbreviations are: a, animal view (stage 10); a, anterior view (stage 30); d, dorsal view; l, lateral view; p, posterior view; s, sagittal section; t, transverse section; v, vegetal view (stage 10); v, ventral view (stage 30). page 15

Image published in: Gawantka V et al. (1998)

Copyright © 1998. Image reproduced on Xenbase with permission of the Publisher, Elsevier B. V.

GeneCloneSynonymsSpeciesStage(s)Tissue
hnrnpdl.L22G10-2hnRNP, jktbp, jktbp2, laauf1X.laevisThroughout NF stage 29 and 30 
pcdh8.2.L22F11-1papc, arcadlinX.laevisSometime during NF stage 10.5 to NF stage 29 and 30 
eif1.S22F10-1sui1, a121, iso1, eif-1, eif1aX.laevisSometime during NF stage 10.5 to NF stage 29 and 30 
jpt1.L22F1-1hn1X.laevisThroughout NF stage 29 and 30 
hmgn3.S22C2-2pnas-24, pnas-25, trip7, hmgn3-b, hmgn3-aX.laevisThroughout NF stage 29 and 30 
ssr2.L22A8-1X.laevisSometime during NF stage 10.5 to NF stage 29 and 30 
apobec2.L21H6-1mgc84761X.laevisSometime during NF stage 10.5 to NF stage 29 and 30somite
epaxial muscle
h3f3c.L21H2-1X.laevisThroughout NF stage 29 and 30 
gs17.L21G6-1X.laevisSometime during NF stage 10.5 to NF stage 29 and 30 

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