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XB-IMG-82044

Xenbase Image ID: 82044


Fig. 3. Whole mount in situ hybridizations, sequence similarities and functional classifications. The left-most part represents the results of sequence similarity searches from 273 partially sequenced cDNAs representing unique, differentially expressed genes: clone name; accession number of best hit, P-value; name of best hit; functional classification. The order of the genes follows first digit sorting, e.g. 1, 10, 2, 20 etc. Abbreviations: o, orphan genes; m, metabolism gene; r, developmental regulator gene; r?, housekeeping regulator gene; s, structural gene; Xl, known Xenopus gene; +, GRAIL1 good coding potential; ++, GRAIL1 excellent coding potential. The P-value is the probability provided by the BLAST programme and calculated using Karlinltschul statistics, that the sequence similarity is due to randomness. For EST hits, the similarities derived from the comparison of the EST or cluster of EST sequences is given. The right-most part shows in situ hybridizations results for stages 10+, 13 and 30. Abbreviations are: a, animal view (stage 10); a, anterior view (stage 30); d, dorsal view; l, lateral view; p, posterior view; s, sagittal section; t, transverse section; v, vegetal view (stage 10); v, ventral view (stage 30). page 19

Image published in: Gawantka V et al. (1998)

Copyright © 1998. Image reproduced on Xenbase with permission of the Publisher, Elsevier B. V.

GeneCloneSynonymsSpeciesStage(s)Tissue
slc25a24.S26G2-1apc1, scamc-1, slc25a24-a, slc25a24-bX.laevisSometime during NF stage 13 to NF stage 29 and 30 
tmpo.L26F11-2lap2, lamina associated polypeptide 2, thymopoietin, xlap2X.laevisThroughout NF stage 29 and 30 
ptmap12.L26F2-1LOC734001, loc728026X.laevisSometime during NF stage 13 to NF stage 29 and 30spinal cord
tuba1cl.3.L26E9-1lis3, tuba3, b-alpha-1, alphatub84, tuba1a-a, tuba1a-b, tuba1aX.laevisSometime during NF stage 10.5 to NF stage 29 and 30 
nradd.S26E7-1plaidd, p75-like apoptosis-inducing death domain protein, nrddX.laevisSometime during NF stage 10.5 to NF stage 29 and 30 
hmgb3.L26E1-1Xhmgb3X.laevisThroughout NF stage 29 and 30 
hao1.L26D10-126D10X.laevisSometime during NF stage 13 to NF stage 29 and 30heart
sp5l.S26C1-1xspr-2, spr2, spr-2, XSpr2, gli1-2X.laevisSometime during NF stage 10.5 to NF stage 29 and 30 
dhx32.L26B11-1X.laevisThroughout NF stage 29 and 30 
magoh.L26A10-2mago, mago nashi, xl-mago, grandchildlessX.laevisThroughout NF stage 29 and 30 
sox17a.L xSox17alpha1, xSox17alpha2, tSox17alpha, Xsox17-alpha, Sox17alpha, sox17-alpha, xsox17a, xsox17, Xsox17alpha, sox17 alphaX.laevisSometime during NF stage 10.5 to NF stage 29 and 30 
fech.L X.laevisThroughout NF stage 29 and 30 

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