Fig. 4. (a,b) Expression patterns of the single clones identified in the unique full-length set screen. Xenopus tropicalis gastrula, neurula and tailbud stage embryos were in situ hybridised with antisense probes to the single clones identified in the unique full-length set screen. Gastrula stages embryos are shown vegetally with dorsal to the top (unless stated otherwise). At neurula stages an anterior and dorsal view is presented. Tailbud embryos are oriented with anterior to the left and dorsal to the top unless indicated otherwise. In come cases the wholemount images are supplemented by neurula and tailbud stage dissected embryos. If no specific staining was detected no image is shown.
Image published in: Voigt J et al. (2005)
Copyright © 2005. Image reproduced with permission of the Publisher, Elsevier B. V.
| Gene | Synonyms | Species | Stage(s) | Tissue |
|---|---|---|---|---|
| zic3 | xzic3, Zinc finger protein of the cerebellum 3 | X. tropicalis | Throughout NF stage 11 | dorsal upper blastopore lip dorsal marginal zone |
| zic3 | xzic3, Zinc finger protein of the cerebellum 3 | X. tropicalis | Throughout NF stage 17 | neural plate pre-chordal neural plate chordal neural plate anterior neural ridge anterior neural fold |
| zic3 | xzic3, Zinc finger protein of the cerebellum 3 | X. tropicalis | Throughout NF stage 28 | central nervous system spinal cord brain midbrain hindbrain |
| fzd10 | frizzled-10, frizzled10, Fz-10, fz10, fzd10-a, fzd10-b, Xfr9, Xfz10 | X. tropicalis | Throughout NF stage 17 | neural plate |
| fzd10 | frizzled-10, frizzled10, Fz-10, fz10, fzd10-a, fzd10-b, Xfr9, Xfz10 | X. tropicalis | Throughout NF stage 28 | central nervous system brain spinal cord midbrain hindbrain |
| vangl2 | lpp1, ltap, stb1, stbm, stbm1, strabismus, Van Gogh, van gogh-like2, vang, vang-like 2, vangl2-a, vangl2-b, Xstrabismus | X. tropicalis | Throughout NF stage 11 | dorsal marginal zone |
| vangl2 | lpp1, ltap, stb1, stbm, stbm1, strabismus, Van Gogh, van gogh-like2, vang, vang-like 2, vangl2-a, vangl2-b, Xstrabismus | X. tropicalis | Throughout NF stage 17 | neural plate optic field preplacodal ectoderm anterior placodal area pre-chordal neural plate chordal neural plate |
| vangl2 | lpp1, ltap, stb1, stbm, stbm1, strabismus, Van Gogh, van gogh-like2, vang, vang-like 2, vangl2-a, vangl2-b, Xstrabismus | X. tropicalis | Throughout NF stage 28 | pharyngeal arch brain midbrain hindbrain central nervous system spinal cord anterior dorsal lateral plate region |
| zbtb2 | X. tropicalis | Throughout NF stage 11 | marginal zone | |
| zbtb2 | X. tropicalis | Throughout NF stage 17 | neural plate optic field preplacodal ectoderm anterior placodal area | |
| zbtb2 | X. tropicalis | Throughout NF stage 28 | pharyngeal arch mandibular arch hyoid arch branchial arch eye otic vesicle floor plate trigeminal nerve cranial nerve cephalic nerve | |
| cul1 | cullin-1 | X. tropicalis | Throughout NF stage 11 | dorsal ectoderm |
| cul1 | cullin-1 | X. tropicalis | Throughout NF stage 17 | neural plate optic field cranial neural crest preplacodal ectoderm anterior placodal area |
| cul1 | cullin-1 | X. tropicalis | Throughout NF stage 28 | otic vesicle pharyngeal arch mandibular arch hyoid arch branchial arch eye hindbrain |
| sox2 | anop3, LOC108718087, mcops3, Sox-2, XLSOX-2, Xsox-2, XSox2 | X. tropicalis | Throughout NF stage 11 | ectoderm animal cap |
| sox2 | anop3, LOC108718087, mcops3, Sox-2, XLSOX-2, Xsox-2, XSox2 | X. tropicalis | Throughout NF stage 17 | neural plate |
| sox2 | anop3, LOC108718087, mcops3, Sox-2, XLSOX-2, Xsox-2, XSox2 | X. tropicalis | Throughout NF stage 28 | eye central nervous system brain spinal cord forebrain hindbrain |
| srsf7 | 9g8, aag3, sfrs7 | X. tropicalis | Throughout NF stage 11 | animal hemisphere animal |
| srsf7 | 9g8, aag3, sfrs7 | X. tropicalis | Throughout NF stage 17 | neural plate optic field cranial neural crest preplacodal ectoderm anterior placodal area pre-chordal neural plate chordal neural plate mandibular crest branchial crest |
| srsf7 | 9g8, aag3, sfrs7 | X. tropicalis | Throughout NF stage 28 to NF stage 35 and 36 | pharyngeal arch mandibular arch hyoid arch branchial arch central nervous system brain spinal cord eye hindbrain pronephric nephrostome pronephric mesenchyme midbrain-hindbrain boundary |
| mef2d | mef2d-a, mef2d-b, sl1, XMEF2D | X. tropicalis | Throughout NF stage 17 | presomitic mesoderm paraxial mesoderm |
| mef2d | mef2d-a, mef2d-b, sl1, XMEF2D | X. tropicalis | Throughout NF stage 28 | heart presomitic mesoderm myotome myoblast |
| etv1 | er81, XER81 | X. tropicalis | Throughout NF stage 11 | marginal zone |
| etv1 | er81, XER81 | X. tropicalis | Throughout NF stage 17 to NF stage 29 and 30 | preplacodal ectoderm anterior placodal area neural plate pre-chordal neural plate tail bud posterior |
| etv1 | er81, XER81 | X. tropicalis | Throughout NF stage 28 | otic vesicle midbrain-hindbrain boundary pharyngeal arch |
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