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Figure 6. The Second 32 Members of the Shortened Axis Phenotypic Class This class can be subdivided into six synphenotype groups, as indicated in Figure 3 and Table 4. The figure shows examples of the fourth synphenotype group (short axis surviving to tadpole) at tadpole stages 35�41. doi:10.1371/journal.pgen.0020193.g006

Image published in: Rana AA et al. (2006)

Copyright © 2006. This image is reproduced with permission of the journal and the copyright holder. This is an open-access article distributed under the terms of the Creative Commons Attribution license

Experiment + Assay Source Phenotypes and Disease
Xtr Wt + ahnak MO + NF28 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal axis elongation
abnormal tail bud morphology
decreased length of anterior-posterior axis
decreased size of the tail bud
Xtr Wt + ahnak MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal axis elongation
abnormal dorsal fin morphology
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
decreased size of the tail bud
Xtr Wt + calhm2 MO + NF10-10.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + calhm2 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal anterior-posterior axis, curved dorsal
abnormal head morphology
decreased length of anterior-posterior axis
Xtr Wt + calhm2 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail morphology
decreased length of anterior-posterior axis
decreased size of the whole organism
Xtr Wt + chn1 MO + NF28 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
Xtr Wt + chn1 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail morphology
decreased length of anterior-posterior axis
decreased size of the head
Xtr Wt + dlg1 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal swimming behavior
abnormal tail morphology
decreased length of anterior-posterior axis
decreased size of the tail
Xtr Wt + dmd.2 MO + NF10.5-11.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + dmd.2 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
absent head
decreased length of anterior-posterior axis
Xtr Wt + dmd.2 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal somite morphology
abnormal swimming behavior
absent head
absent swimming behavior
decreased length of anterior-posterior axis
Xtr Wt + dynlt1 MO + gastrula stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + dynlt1 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
Xtr Wt + dynlt1 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail morphology
decreased length of anterior-posterior axis
decreased size of the head
decreased size of the tail
Xtr Wt + fam214a MO + NF10.5-11.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + fam214a MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
decreased length of anterior-posterior axis
wholly ventralized embryo
Xtr Wt + fam214a MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail morphology
absent eye
decreased length of anterior-posterior axis
wholly ventralized embryo
Xtr Wt + fzd6 MO + NF10.5-11.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + fzd6 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal neural tube closure
abnormal tail bud morphology
decreased length of anterior-posterior axis
Xtr Wt + fzd6 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
Xtr Wt + fzd7 MO + NF10.5-11.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + fzd7 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
Xtr Wt + fzd7 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal whole organism morphology
decreased length of anterior-posterior axis
Xtr Wt + hap1 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
decreased length of anterior-posterior axis
Xtr Wt + hap1 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail morphology
abnormally ruffled dorsal fin
Xtr Wt + ing2 MO + NF10.5-11.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + ing2 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
wholly ventralized embryo
Xtr Wt + ing2 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
abnormally ruffled dorsal fin
decreased length of anterior-posterior axis
wholly ventralized embryo
Xtr Wt + ing5 MO + NF10.5-11.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + ing5 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
obsolete abnormally edematous dorsal fin
Xtr Wt + itgb1 MO + NF10.5-11.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + itgb1 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
wholly ventralized embryo
Xtr Wt + itgb1 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
Xtr Wt + lhx1 MO + NF10-10.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + lhx1 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
abnormal tail morphology
decreased length of anterior-posterior axis
Xtr Wt + ncaph2 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal development of embryo
Xtr Wt + ncaph2 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail morphology
decreased length of anterior-posterior axis
edematous ventral trunk
Xtr Wt + nradd MO + NF10.5-11.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + nradd MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
wholly ventralized embryo
Xtr Wt + nradd MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal tail bud morphology
decreased length of anterior-posterior axis
Xtr Wt + padi2 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal development of embryo
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
Xtr Wt + padi2 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal somitogenesis
abnormal tail bud morphology
decreased length of anterior-posterior axis
Xtr Wt + pinx1 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
decreased length of anterior-posterior axis
Xtr Wt + pinx1 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail morphology
decreased length of anterior-posterior axis
decreased size of the head
Xtr Wt + prkci MO + NF10-10.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
absent blastopore
Xtr Wt + prkci MO + tailbud stage-tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail morphology
decreased length of anterior-posterior axis
Xtr Wt + rbl2 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal whole organism morphology
decreased length of anterior-posterior axis
Xtr Wt + rbl2 MO + tailbud stage-tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
arrested axis elongation
Xtr Wt + rbl2 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal bending of tail
abnormal head morphology
absent eye
decreased length of anterior-posterior axis
decreased size of the tail
Xtr Wt + rtfdc1 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal development of embryo
decreased length of anterior-posterior axis
Xtr Wt + smad3 MO + NF10-10.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + smad3 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
absent tail bud
decreased length of anterior-posterior axis
wholly ventralized embryo
Xtr Wt + smad3 MO + tailbud stage-tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
absent head
Xtr Wt + smad3 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal bending of tail
abnormal development of embryo
decreased length of anterior-posterior axis
Xtr Wt + suv39h2 MO + NF10-10.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + suv39h2 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal development of embryo
decreased length of anterior-posterior axis
Xtr Wt + suv39h2 MO + tailbud stage-tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
absent head
Xtr Wt + suv39h2 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal bending of tail
Xtr Wt + tbx2 MO + NF10-10.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + tbx2 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal tail bud morphology
absent tail bud
decreased length of anterior-posterior axis
Xtr Wt + tbx2 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal whole organism morphology
decreased length of anterior-posterior axis
Xtr Wt + tbx2 MO + tailbud stage-tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
absent head
Xtr Wt + tbx2 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal bending of tail
absent head
decreased length of anterior-posterior axis
Xtr Wt + tbx2 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal tail bud morphology
decreased length of anterior-posterior axis
Xtr Wt + tbx2 MO + tadpole stage-tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal trunk morphology
Xtr Wt + tbx6 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal development of tail
decreased length of anterior-posterior axis
decreased size of the tail bud
wholly ventralized embryo
Xtr Wt + tbx6 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
edematous ventral trunk
Xtr Wt + tp53 MO + NF10-10.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + tp53 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
Xtr Wt + tp53 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal axis elongation
abnormal head morphology
abnormal tail morphology
decreased length of anterior-posterior axis
Xtr Wt + trmt61a + NF10-10.5 (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal gastrulation
abnormally delayed closure of blastopore
Xtr Wt + trmt61a + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail morphology
absent swimming behavior
arrested axis elongation
decreased length of anterior-posterior axis
Xtr Wt + tsg101 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal development of embryo
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
wholly ventralized embryo
Xtr Wt + tsg101 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail morphology
decreased length of anterior-posterior axis
decreased size of the eye
Xtr Wt + ubn2 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal development of embryo
Xtr Wt + ubn2 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail morphology
decreased length of anterior-posterior axis
decreased size of the trunk
Xtr Wt + znf326 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal development of embryo
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
Xtr Wt + znf326 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal bending of tail
abnormal development of embryo
abnormal tail morphology
decreased length of anterior-posterior axis
Xtr Wt + znf674 MO + tailbud stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal head morphology
abnormal tail bud morphology
decreased length of anterior-posterior axis
wholly ventralized embryo
Xtr Wt + znf674 MO + tadpole stage (morphology) fig.6, Table 4
Anatomical Phenotype
abnormal bending of tail
abnormal head morphology
abnormal heart morphology
abnormally ruffled dorsal fin
decreased length of anterior-posterior axis
decreased size of the head
wholly ventralized embryo

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