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Profile Publications(30)

Publications By Ira L. Blitz

Results 1 - 20 of 30 results

Page(s): 1 2 Next

DNase-seq to Study Chromatin Accessibility in Early Xenopus tropicalis Embryos.
Cho JS, Blitz IL, Cho KWY.
Cold Spring Harb Protoc. August 21, 2018;

Primordial Germ Cell Transplantation for CRISPR/Cas9-based Leapfrogging in Xenopus.
Blitz IL.
J Vis Exp. January 1, 2018; (132):

Developmentally regulated long non-coding RNAs in Xenopus tropicalis.
Forouzmand E, Owens NDL, Blitz IL, Paraiso KD, Khokha MK, Gilchrist MJ, Xie X, Cho KWY.
Dev Biol. January 1, 2017; 426 (2): 401-408.

A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo.
Blitz IL, Paraiso KD, Patrushev I, Chiu WTY, Cho KWY, Gilchrist MJ.
Dev Biol. January 1, 2017; 426 (2): 409-417.

Foxh1 Occupies cis-Regulatory Modules Prior to Dynamic Transcription Factor Interactions Controlling the Mesendoderm Gene Program.
Charney RM, Forouzmand E, Cho JS, Cheung J, Paraiso KD, Yasuoka Y, Takahashi S, Taira M, Blitz IL, Xie X, Cho KW.
Dev Cell. January 1, 2017; 40 (6): 595-607.e4.

A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs.
Charney RM, Paraiso KD, Blitz IL, Cho KWY.
Semin Cell Dev Biol. January 1, 2017; 66 12-24.

Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development.
Owens ND, Blitz IL, Lane MA, Patrushev I, Overton JD, Gilchrist MJ, Cho KW, Khokha MK.
Cell Rep. January 26, 2016; 14 (3): 632-47.

Leapfrogging: primordial germ cell transplantation permits recovery of CRISPR/Cas9-induced mutations in essential genes.
Blitz IL, Fish MB, Cho KW.
Development. January 1, 2016; 143 (15): 2868-75.

Genome-wide view of TGFβ/Foxh1 regulation of the early mesendoderm program.
Chiu WT, Charney Le R, Blitz IL, Fish MB, Li Y, Biesinger J, Xie X, Cho KW.
Development. December 1, 2014; 141 (23): 4537-47.

Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns.
Zheng Z, Christley S, Chiu WT, Blitz IL, Xie X, Cho KW, Nie Q.
BMC Syst Biol. January 8, 2014; 8 3.

Cas9-based genome editing in Xenopus tropicalis.
Nakayama T, Blitz IL, Fish MB, Odeleye AO, Manohar S, Cho KW, Grainger RM.
Methods Enzymol. January 1, 2014; 546 355-75.

Biallelic genome modification in F(0) Xenopus tropicalis embryos using the CRISPR/Cas system.
Blitz IL, Biesinger J, Xie X, Cho KW.
Genesis. December 1, 2013; 51 (12): 827-34.

Navigating the Xenopus tropicalis genome.
Blitz IL.
Methods Mol Biol. January 1, 2012; 917 43-65.

Combinatorial roles for BMPs and Endothelin 1 in patterning the dorsal-ventral axis of the craniofacial skeleton.
Alexander C, Zuniga E, Blitz IL, Wada N, Le Pabic P, Javidan Y, Zhang T, Cho KW, Crump JG, Schilling TF.
Development. December 1, 2011; 138 (23): 5135-46.

Opposing Nodal/Vg1 and BMP signals mediate axial patterning in embryos of the basal chordate amphioxus.
Onai T, Yu JK, Blitz IL, Cho KW, Holland LZ.
Dev Biol. August 1, 2010; 344 (1): 377-89.

The genome of the Western clawed frog Xenopus tropicalis.
Hellsten U, Harland RM, Gilchrist MJ, Hendrix D, Jurka J, Kapitonov V, Ovcharenko I, Putnam NH, Shu S, Taher L, Blitz IL, Blumberg B, Dichmann DS, Dubchak I, Amaya E, Detter JC, Fletcher R, Gerhard DS, Goodstein D, Graves T, Grigoriev IV, Grimwood J, Kawashima T, Lindquist E, Lucas SM, Mead PE, Mitros T, Ogino H, Ohta Y, Poliakov AV, Pollet N, Robert J, Salamov A, Sater AK, Schmutz J, Terry A, Vize PD, Warren WC, Wells D, Wills A, Wilson RK, Zimmerman LB, Zorn AM, Grainger R, Grammer T, Khokha MK, Richardson PM, Rokhsar DS.
Science. April 30, 2010; 328 (5978): 633-6.

Identification of embryonic pancreatic genes using Xenopus DNA microarrays.
Hayata T, Blitz IL, Iwata N, Cho KW.
Dev Dyn. June 1, 2009; 238 (6): 1455-66.

Schnurri transcription factors from Drosophila and vertebrates can mediate Bmp signaling through a phylogenetically conserved mechanism.
Yao LC, Blitz IL, Peiffer DA, Phin S, Wang Y, Ogata S, Cho KW, Arora K, Warrior R.
Development. October 1, 2006; 133 (20): 4025-34.

Germ layers to organs: using Xenopus to study "later" development.
Blitz IL, Andelfinger G, Horb ME.
Semin Cell Dev Biol. February 1, 2006; 17 (1): 133-45.

Phylogenetic footprinting and genome scanning identify vertebrate BMP response elements and new target genes.
von Bubnoff A, Peiffer DA, Blitz IL, Hayata T, Ogata S, Zeng Q, Trunnell M, Cho KW.
Dev Biol. May 15, 2005; 281 (2): 210-26.

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