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Profile Publications(72)
XB-PERS-720

Publications By Aaron M. Zorn

Results 1 - 20 of 72 results

Page(s): 1 2 3 4 Next

High-efficiency non-mosaic CRISPR-mediated knock-in and indel mutation in F0 Xenopus.
Aslan Y, Tadjuidje E, Zorn AM, Cha SW.
Development. August 1, 2017; 144 (15): 2852-2858.

Xenopus genomic data and browser resources.
Vize PD, Zorn AM.
Dev Biol. June 15, 2017; 426 (2): 194-199.

Genomic integration of Wnt/β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs.
Stevens ML, Chaturvedi P, Rankin SA, Macdonald M, Jagannathan S, Yukawa M, Barski A, Zorn AM.
Development. April 1, 2017; 144 (7): 1283-1295.

Genome evolution in the allotetraploid frog Xenopus laevis.
Session AM, Uno Y, Kwon T, Chapman JA, Toyoda A, Takahashi S, Fukui A, Hikosaka A, Suzuki A, Kondo M, van Heeringen SJ, Quigley I, Heinz S, Ogino H, Ochi H, Hellsten U, Lyons JB, Simakov O, Putnam N, Stites J, Kuroki Y, Tanaka T, Michiue T, Watanabe M, Bogdanovic O, Lister R, Georgiou G, Paranjpe SS, van Kruijsbergen I, Shu S, Carlson J, Kinoshita T, Ohta Y, Mawaribuchi S, Jenkins J, Grimwood J, Schmutz J, Mitros T, Mozaffari SV, Suzuki Y, Haramoto Y, Yamamoto TS, Takagi C, Heald R, Miller K, Haudenschild C, Kitzman J, Nakayama T, Izutsu Y, Robert J, Fortriede J, Burns K, Lotay V, Karimi K, Yasuoka Y, Dichmann DS, Flajnik MF, Houston DW, Shendure J, DuPasquier L, Vize PD, Zorn AM, Ito M, Marcotte EM, Wallingford JB, Ito Y, Asashima M, Ueno N, Matsuda Y, Veenstra GJ, Fujiyama A, Harland RM, Taira M, Rokhsar DS.
Nature. October 20, 2016; 538 (7625): 336-343.

Syndecan4 coordinates Wnt/JNK and BMP signaling to regulate foregut progenitor development.
Zhang Z, Rankin SA, Zorn AM.
Dev Biol. August 1, 2016; 416 (1): 187-199.

A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification.
Rankin SA, Han L, McCracken KW, Kenny AP, Anglin CT, Grigg EA, Crawford CM, Wells JM, Shannon JM, Zorn AM.
Cell Rep. June 28, 2016; 16 (1): 66-78.

Identification of genes expressed in the migrating primitive myeloid lineage of Xenopus laevis.
Agricola ZN, Jagpal AK, Allbee AW, Prewitt AR, Shifley ET, Rankin SA, Zorn AM, Kenny AP.
Dev Dyn. January 1, 2016; 245 (1): 47-55.

The Xenopus ORFeome: A resource that enables functional genomics.
Grant IM, Balcha D, Hao T, Shen Y, Trivedi P, Patrushev I, Fortriede JD, Karpinka JB, Liu L, Zorn AM, Stukenberg PT, Hill DE, Gilchrist MJ.
Dev Biol. December 15, 2015; 408 (2): 345-57.

Modeling human development and disease in Xenopus. Preface.
LaBonne C, Zorn AM.
Dev Biol. December 15, 2015; 408 (2): 179.

Regeneration of Thyroid Function by Transplantation of Differentiated Pluripotent Stem Cells.
Kurmann AA, Serra M, Hawkins F, Rankin SA, Mori M, Astapova I, Ullas S, Lin S, Bilodeau M, Rossant J, Jean JC, Ikonomou L, Deterding RR, Shannon JM, Zorn AM, Hollenberg AN, Kotton DN.
Cell Stem Cell. November 5, 2015; 17 (5): 527-42.

Xenbase: Core features, data acquisition, and data processing.
James-Zorn C, Ponferrada VG, Burns KA, Fortriede JD, Lotay VS, Liu Y, Brad Karpinka J, Karimi K, Zorn AM, Vize PD.
Genesis. August 1, 2015; 53 (8): 486-97.

A Molecular atlas of Xenopus respiratory system development.
Rankin SA, Thi Tran H, Wlizla M, Mancini P, Shifley ET, Bloor SD, Han L, Vleminckx K, Wert SE, Zorn AM.
Dev Dyn. January 1, 2015; 244 (1): 69-85.

Xenbase, the Xenopus model organism database; new virtualized system, data types and genomes.
Karpinka JB, Fortriede JD, Burns KA, James-Zorn C, Ponferrada VG, Lee J, Karimi K, Zorn AM, Vize PD.
Nucleic Acids Res. January 1, 2015; 43 (Database issue): D756-63.

Finding Our Way through Phenotypes.
Deans AR, Lewis SE, Huala E, Anzaldo SS, Ashburner M, Balhoff JP, Blackburn DC, Blake JA, Burleigh JG, Chanet B, Cooper LD, Courtot M, Csösz S, Cui H, Dahdul W, Das S, Dececchi TA, Dettai A, Diogo R, Druzinsky RE, Dumontier M, Franz NM, Friedrich F, Gkoutos GV, Haendel M, Harmon LJ, Hayamizu TF, He Y, Hines HM, Ibrahim N, Jackson LM, Jaiswal P, James-Zorn C, Köhler S, Lecointre G, Lapp H, Lawrence CJ, Le Novère N, Lundberg JG, Macklin J, Mast AR, Midford PE, Mikó I, Mungall CJ, Oellrich A, Osumi-Sutherland D, Parkinson H, Ramírez MJ, Richter S, Robinson PN, Ruttenberg A, Schulz KS, Segerdell E, Seltmann KC, Sharkey MJ, Smith AD, Smith B, Specht CD, Squires RB, Thacker RW, Thessen A, Fernandez-Triana J, Vihinen M, Vize PD, Vogt L, Wall CE, Walls RL, Westerfeld M, Wharton RA, Wirkner CS, Woolley JB, Yoder MJ, Zorn AM, Mabee P.
PLoS Biol. January 1, 2015; 13 (1): e1002033.

A New Nomenclature of Xenopus laevis Chromosomes Based on the Phylogenetic Relationship to Silurana/Xenopus tropicalis.
Matsuda Y, Uno Y, Kondo M, Gilchrist MJ, Zorn AM, Rokhsar DS, Schmid M, Taira M.
Cytogenet Genome Res. January 1, 2015; 145 (3-4): 187-91.

Gene regulatory networks governing lung specification.
Rankin SA, Zorn AM.
J Cell Biochem. August 1, 2014; 115 (8): 1343-50.

Enhanced XAO: the ontology of Xenopus anatomy and development underpins more accurate annotation of gene expression and queries on Xenbase.
Segerdell E, Ponferrada VG, James-Zorn C, Burns KA, Fortriede JD, Dahdul WM, Vize PD, Zorn AM.
J Biomed Semantics. October 18, 2013; 4 (1): 31.

Structure of protein related to Dan and Cerberus: insights into the mechanism of bone morphogenetic protein antagonism.
Nolan K, Kattamuri C, Luedeke DM, Deng X, Jagpal A, Zhang F, Linhardt RJ, Kenny AP, Zorn AM, Thompson TB.
Structure. August 6, 2013; 21 (8): 1417-29.

Different thresholds of Wnt-Frizzled 7 signaling coordinate proliferation, morphogenesis and fate of endoderm progenitor cells.
Zhang Z, Rankin SA, Zorn AM.
Dev Biol. June 1, 2013; 378 (1): 1-12.

Xenbase: expansion and updates of the Xenopus model organism database.
James-Zorn C, Ponferrada VG, Jarabek CJ, Burns KA, Segerdell EJ, Lee J, Snyder K, Bhattacharyya B, Karpinka JB, Fortriede J, Bowes JB, Zorn AM, Vize PD.
Nucleic Acids Res. January 1, 2013; 41 (Database issue): D865-70.

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