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Profile Publications(41)
XB-PERS-758

Publications By Mustafa K. Khokha

Results 1 - 20 of 41 results

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Visualization and quantification of injury to the ciliated epithelium using quantitative flow imaging and speckle variance optical coherence tomography.
Gamm UA, Huang BK, Mis EK, Khokha MK, Choma MA.
Sci Rep. November 15, 2017; 7 (1): 15115.

Developmentally regulated long non-coding RNAs in Xenopus tropicalis.
Forouzmand E, Owens NDL, Blitz IL, Paraiso KD, Khokha MK, Gilchrist MJ, Xie X, Cho KWY.
Dev Biol. June 15, 2017; 426 (2): 401-408.

An interspecies heart-to-heart: Using Xenopus to uncover the genetic basis of congenital heart disease.
Garfinkel AM, Khokha MK.
Curr Pathobiol Rep. June 1, 2017; 5 (2): 187-196.

Analysis of Craniocardiac Malformations in Xenopus using Optical Coherence Tomography.
Deniz E, Jonas S, Hooper M, N Griffin J, Choma MA, Khokha MK.
Sci Rep. March 28, 2017; 7 42506.

Ultrahigh-speed, phase-sensitive full-field interferometric confocal microscopy for quantitative microscale physiology.
Sencan I, Huang BK, Bian Y, Mis E, Khokha MK, Cao H, Choma M.
Biomed Opt Express. November 1, 2016; 7 (11): 4674-4684.

Expression of ribosomopathy genes during Xenopus tropicalis embryogenesis.
Robson A, Owens ND, Baserga SJ, Khokha MK, Griffin JN.
BMC Dev Biol. October 26, 2016; 16 (1): 38.

Codon identity regulates mRNA stability and translation efficiency during the maternal-to-zygotic transition.
Bazzini AA, Del Viso F, Moreno-Mateos MA, Johnstone TG, Vejnar CE, Qin Y, Yao J, Khokha MK, Giraldez AJ.
EMBO J. October 4, 2016; 35 (19): 2087-2103.

Congenital Heart Disease Genetics Uncovers Context-Dependent Organization and Function of Nucleoporins at Cilia.
Del Viso F, Huang F, Myers J, Chalfant M, Zhang Y, Reza N, Bewersdorf J, Lusk CP, Khokha MK.
Dev Cell. September 12, 2016; 38 (5): 478-92.

Particle streak velocimetry-optical coherence tomography: a novel method for multidimensional imaging of microscale fluid flows.
Zhou KC, Huang BK, Gamm UA, Bhandari V, Khokha MK, Choma MA.
Biomed Opt Express. April 1, 2016; 7 (4): 1590-603.

Xenopus as a model organism for birth defects-Congenital heart disease and heterotaxy.
Duncan AR, Khokha MK.
Semin Cell Dev Biol. March 1, 2016; 51 73-9.

Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development.
Owens ND, Blitz IL, Lane MA, Patrushev I, Overton JD, Gilchrist MJ, Cho KW, Khokha MK.
Cell Rep. January 26, 2016; 14 (3): 632-47.

Nucleoporin gene expression in Xenopus tropicalis embryonic development.
Reza N, Khokha MK, Del Viso F.
Int J Dev Biol. January 1, 2016; 60 (4-6): 181-8.

CRISPR/Cas9: An inexpensive, efficient loss of function tool to screen human disease genes in Xenopus.
Bhattacharya D, Marfo CA, Li D, Lane M, Khokha MK.
Dev Biol. December 15, 2015; 408 (2): 196-204.

The NIMA-like kinase Nek2 is a key switch balancing cilia biogenesis and resorption in the development of left-right asymmetry.
Endicott SJ, Basu B, Khokha M, Brueckner M.
Development. December 1, 2015; 142 (23): 4068-79.

CRISPRscan: designing highly efficient sgRNAs for CRISPR-Cas9 targeting in vivo.
Moreno-Mateos MA, Vejnar CE, Beaudoin JD, Fernandez JP, Mis EK, Khokha MK, Giraldez AJ.
Nat Methods. October 1, 2015; 12 (10): 982-8.

Three-dimensional, three-vector-component velocimetry of cilia-driven fluid flow using correlation-based approaches in optical coherence tomography.
Huang BK, Gamm UA, Bhandari V, Khokha MK, Choma MA.
Biomed Opt Express. September 1, 2015; 6 (9): 3515-38.

The ribosome biogenesis factor Nol11 is required for optimal rDNA transcription and craniofacial development in Xenopus.
Griffin JN, Sondalle SB, Del Viso F, Baserga SJ, Khokha MK.
PLoS Genet. March 1, 2015; 11 (3): e1005018.

The heterotaxy gene GALNT11 glycosylates Notch to orchestrate cilia type and laterality.
Boskovski MT, Yuan S, Pedersen NB, Goth CK, Makova S, Clausen H, Brueckner M, Khokha MK.
Nature. December 19, 2013; 504 (7480): 456-9.

A novel approach to quantifying ciliary physiology: microfluidic mixing driven by a ciliated biological surface.
Jonas S, Zhou E, Deniz E, Huang B, Chandrasekera K, Bhattacharya D, Wu Y, Fan R, Deserno TM, Khokha MK, Choma MA.
Lab Chip. November 7, 2013; 13 (21): 4160-3.

Embryonic exposure to propylthiouracil disrupts left-right patterning in Xenopus embryos.
van Veenendaal NR, Ulmer B, Boskovski MT, Fang X, Khokha MK, Wendler CC, Blum M, Rivkees SA.
FASEB J. February 1, 2013; 27 (2): 684-91.

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