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Xenopus tropicalis genome draft 4.1: 10 kbp from scaffold_1:1..10,000
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Xenopus tropicalis genome draft 4.1
Xenopus tropicalis genome draft 7.1 (Annotation 7.2)
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GC Content
Affymetrix Probes
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Affymetrix Laevis 1.0 Chip Probe Targets
Affymetrix Laevis 2.0 Chip Probe Targets
Affymetrix Tropicalis 1.0 Chip Probe Targets
Clones
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Xenopus laevis in situ hybridization probes
Xenopus tropicalis In Situ hybridiazation probes
ENSEMBL Models
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Ensembl 4.1 Tropicalis Gene Models
Ensembl 4.1 Tropicalis Model Transcripts
EcRs
EcRs
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Core Zebrafish EcR Danrer5 versus XenTro2
Standard Chicken EcR Galgal3 versus XenTro2
Core Mouse EcR Mm9 versus XenTro2
Standard Zebrafish EcR Danrer5 versus XenTro2
Core Human EcR Hg18 versus XenTro2
Standard Mouse EcR Mm9 versus XenTro2
Core Chicken EcR Galgal3 versus XenTro2
Standard Human EcR Hg18 versus XenTro2
Fosmids
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Xenopus tropicalis genomic fosmids
Gurdon Clusters
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Gurdon XL 3 EST Clusters
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Jgi 4.1 Tropicalis Gene Models - EstExtFgenesh1Kg
Jgi 4.1 Tropicalis Gene Models - Genewise1
Jgi 4.1 Tropicalis Transcript Models - Fgenesh1Kg
Jgi 4.1 Tropicalis Gene Models - EstExtFgenesh1Pg
Jgi 4.1 Tropicalis Gene Models - Genewise1Remove
Jgi 4.1 Tropicalis Transcript Models - Fgenesh1Pg
Jgi 4.1 Tropicalis Gene Models - EstExtFgenesh1Pm
Jgi 4.1 Tropicalis Gene Models - GeneWisePlus
Jgi 4.1 Tropicalis Transcript Models - Fgenesh1SangerCdna
Jgi 4.1 Tropicalis Gene Models - EstExtFilteredModels1
Jgi 4.1 Tropicalis Gene Models - JamUserModels
Jgi 4.1 Tropicalis Transcript Models - Genewise1
Jgi 4.1 Tropicalis Gene Models - EstExtGenewise1
Jgi 4.1 Tropicalis Transcript Models - EstExtFgenesh1Pg
Jgi 4.1 Tropicalis Transcript Models - Genewise1Remove
Jgi 4.1 Tropicalis Gene Models - Fgenesh1Kg
Jgi 4.1 Tropicalis Transcript Models - EstExtFgenesh1Pm
Jgi 4.1 Tropicalis Transcript Models - GeneWisePlus
Jgi 4.1 Tropicalis Gene Models - Fgenesh1Pg
Jgi 4.1 Tropicalis Transcript Models - EstExtFilteredModels1
Jgi 4.1 Tropicalis Transcript Models - JamUserModels
Jgi 4.1 Tropicalis Gene Models - Fgenesh1SangerCdna
Jgi 4.1 Tropicalis Transcript Models - EstExtGenewise1
Methylation Data
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H3K27 ChiP-seq Xenopus Tropicalis animal stages 10 to 12
H3K27 ChiP-seq Xenopus Tropicalis stages vegeta; 10 to 12
H3K27 ChiP-seq Xenopus Tropicalis stages 11 to 12
H3K4 ChiP-seq_Xenopus Tropicalis stages 11 to 12
Promoters
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Xenopous tropicalis XenTro2 RefSeq promoters
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