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Summary Expression Phenotypes Gene Literature (545) GO Terms (27) Nucleotides (552) Proteins (48) Interactants (2333) Wiki
XB--484552

Papers associated with sox2



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The African clawed frog Xenopus laevis: A model organism to study regeneration of the central nervous system., Lee-Liu D, Méndez-Olivos EE, Muñoz R, Larraín J., Neurosci Lett. June 23, 2017; 652 82-93.


Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing., Popov IK, Kwon T, Crossman DK, Crowley MR, Wallingford JB, Chang C., Dev Biol. June 15, 2017; 426 (2): 429-441.                    


Noggin is required for first pharyngeal arch differentiation in the frog Xenopus tropicalis., Young JJ, Kjolby RAS, Wu G, Wong D, Hsu SW, Harland RM., Dev Biol. June 15, 2017; 426 (2): 245-254.                


Developmentally regulated long non-coding RNAs in Xenopus tropicalis., Forouzmand E, Owens NDL, Blitz IL, Paraiso KD, Khokha MK, Gilchrist MJ, Xie X, Cho KWY., Dev Biol. June 15, 2017; 426 (2): 401-408.                  


A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo., Blitz IL, Paraiso KD, Patrushev I, Chiu WTY, Cho KWY, Gilchrist MJ., Dev Biol. June 15, 2017; 426 (2): 409-417.        


no privacy, a Xenopus tropicalis mutant, is a model of human Hermansky-Pudlak Syndrome and allows visualization of internal organogenesis during tadpole development., Nakayama T, Nakajima K, Cox A, Fisher M, Fisher M, Howell M, Fish MB, Yaoita Y, Grainger RM., Dev Biol. June 15, 2017; 426 (2): 472-486.                          


Conservatism and variability of gene expression profiles among homeologous transcription factors in Xenopus laevis., Watanabe M, Yasuoka Y, Mawaribuchi S, Kuretani A, Ito M, Kondo M, Ochi H, Ogino H, Fukui A, Taira M, Kinoshita T., Dev Biol. June 15, 2017; 426 (2): 301-324.                          


sall1 and sall4 repress pou5f3 family expression to allow neural patterning, differentiation, and morphogenesis in Xenopus laevis., Exner CRT, Kim AY, Mardjuki SM, Harland RM., Dev Biol. May 1, 2017; 425 (1): 33-43.                                    


Folate receptor 1 is necessary for neural plate cell apical constriction during Xenopus neural tube formation., Balashova OA, Visina O, Borodinsky LN., Development. April 15, 2017; 144 (8): 1518-1530.                        


FGF and canonical Wnt signaling cooperate to induce paraxial mesoderm from tailbud neuromesodermal progenitors through regulation of a two-step epithelial to mesenchymal transition., Goto H, Kimmey SC, Row RH, Matus DQ, Martin BL., Development. April 15, 2017; 144 (8): 1412-1424.


Dual roles of Akirin2 protein during Xenopus neural development., Liu X, Xia Y, Tang J, Ma L, Li C, Ma P, Mao B., J Biol Chem. April 7, 2017; 292 (14): 5676-5684.                            


Genomic integration of Wnt/β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs., Stevens ML, Chaturvedi P, Rankin SA, Rankin SA, Macdonald M, Jagannathan S, Yukawa M, Barski A, Zorn AM., Development. April 1, 2017; 144 (7): 1283-1295.                            


Distinct intracellular Ca2+ dynamics regulate apical constriction and differentially contribute to neural tube closure., Suzuki M, Sato M, Koyama H, Hara Y, Hayashi K, Yasue N, Imamura H, Fujimori T, Nagai T, Campbell RE, Ueno N., Development. April 1, 2017; 144 (7): 1307-1316.                            


Insights into electrosensory organ development, physiology and evolution from a lateral line-enriched transcriptome., Modrell MS, Lyne M, Carr AR, Zakon HH, Buckley D, Campbell AS, Davis MC, Micklem G, Baker CV., Elife. March 27, 2017; 6             


Pattern of Neurogenesis and Identification of Neuronal Progenitor Subtypes during Pallial Development in Xenopus laevis., Moreno N, González A., Front Neuroanat. March 27, 2017; 11 24.                        


Human amniotic fluid contaminants alter thyroid hormone signalling and early brain development in Xenopus embryos., Fini JB, Mughal BB, Le Mével S, Leemans M, Lettmann M, Spirhanzlova P, Affaticati P, Jenett A, Demeneix BA., Sci Rep. March 7, 2017; 7 43786.        


Gene Resistance to Transcriptional Reprogramming following Nuclear Transfer Is Directly Mediated by Multiple Chromatin-Repressive Pathways., Jullien J, Vodnala M, Pasque V, Oikawa M, Miyamoto K, Allen G, David SA, Brochard V, Wang S, Bradshaw C, Koseki H, Sartorelli V, Beaujean N, Gurdon J., Mol Cell. March 2, 2017; 65 (5): 873-884.e8.                        


JAK-STAT pathway activation in response to spinal cord injury in regenerative and non-regenerative stages of Xenopus laevis., Tapia VS, Herrera-Rojas M, Larrain J., Regeneration (Oxf). February 1, 2017; 4 (1): 21-35.                          


Pa2G4 is a novel Six1 co-factor that is required for neural crest and otic development., Neilson KM, Abbruzzesse G, Kenyon K, Bartolo V, Krohn P, Alfandari D, Alfandari D, Moody SA., Dev Biol. January 15, 2017; 421 (2): 171-182.                    


Eomesodermin-At Dawn of Cell Fate Decisions During Early Embryogenesis., Probst S, Arnold SJ., Curr Top Dev Biol. January 1, 2017; 122 93-115.


Apolipoprotein C-I mediates Wnt/Ctnnb1 signaling during neural border formation and is required for neural crest development., Yokota C, Åstrand C, Takahashi S, Hagey DW, Stenman JM., Int J Dev Biol. January 1, 2017; 61 (6-7): 415-425.                      


La-related protein 6 controls ciliated cell differentiation., Manojlovic Z, Earwood R, Kato A, Perez D, Cabrera OA, Didier R, Megraw TL, Stefanovic B, Kato Y., Cilia. January 1, 2017; 6 4.                


Autoregulation of retinal homeobox (rax) gene promoter activity through a highly conserved genomic element., Kelly LE, Martinez-De Luna RI, El-Hodiri HM., Genesis. November 1, 2016; 54 (11): 562-567.      


EphA7 modulates apical constriction of hindbrain neuroepithelium during neurulation in Xenopus., Wang X, Sun J, Li C, Mao B., Biochem Biophys Res Commun. October 28, 2016; 479 (4): 759-765.        


The histone methyltransferase Setd7 promotes pancreatic progenitor identity., Kofent J, Zhang J, Spagnoli FM., Development. October 1, 2016; 143 (19): 3573-3581.                        


Tbx3 represses bmp4 expression and, with Pax6, is required and sufficient for retina formation., Motahari Z, Martinez-De Luna RI, Viczian AS, Zuber ME., Development. October 1, 2016; 143 (19): 3560-3572.                                      


The E3 ubiquitin ligase Hace1 is required for early embryonic development in Xenopus laevis., Iimura A, Yamazaki F, Suzuki T, Endo T, Nishida E, Kusakabe M., BMC Dev Biol. September 21, 2016; 16 (1): 31.                    


Ror2 signaling is required for local upregulation of GDF6 and activation of BMP signaling at the neural plate border., Schille C, Bayerlová M, Bleckmann A, Schambony A., Development. September 1, 2016; 143 (17): 3182-94.                          


Dissecting the pre-placodal transcriptome to reveal presumptive direct targets of Six1 and Eya1 in cranial placodes., Riddiford N, Schlosser G., Elife. August 31, 2016; 5                                                                         


The positive transcriptional elongation factor (P-TEFb) is required for neural crest specification., Hatch VL, Marin-Barba M, Moxon S, Ford CT, Ward NJ, Tomlinson ML, Desanlis I, Hendry AE, Hontelez S, van Kruijsbergen I, Veenstra GJ, Münsterberg AE, Wheeler GN., Dev Biol. August 15, 2016; 416 (2): 361-72.                                    


Sf3b4-depleted Xenopus embryos: A model to study the pathogenesis of craniofacial defects in Nager syndrome., Devotta A, Juraver-Geslin H, Gonzalez JA, Hong CS, Saint-Jeannet JP., Dev Biol. July 15, 2016; 415 (2): 371-382.                      


The Role of microRNAs in Animal Cell Reprogramming., Cruz-Santos MC, Aragón-Raygoza A, Espinal-Centeno A, Arteaga-Vázquez M, Cruz-Hernández A, Bako L, Cruz-Ramírez A., Stem Cells Dev. July 15, 2016; 25 (14): 1035-49.


A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification., Rankin SA, Rankin SA, Han L, McCracken KW, Kenny AP, Anglin CT, Grigg EA, Crawford CM, Wells JM, Shannon JM, Zorn AM., Cell Rep. June 28, 2016; 16 (1): 66-78.                                              


Delamination of neural crest cells requires transient and reversible Wnt inhibition mediated by Dact1/2., Rabadán MA, Herrera A, Fanlo L, Usieto S, Carmona-Fontaine C, Barriga EH, Mayor R, Pons S, Martí E., Development. June 15, 2016; 143 (12): 2194-205.          


Neural transcription factors bias cleavage stage blastomeres to give rise to neural ectoderm., Gaur S, Mandelbaum M, Herold M, Majumdar HD, Neilson KM, Maynard TM, Mood K, Daar IO, Moody SA., Genesis. June 1, 2016; 54 (6): 334-49.                          


HDAC3 But not HDAC2 Mediates Visual Experience-Dependent Radial Glia Proliferation in the Developing Xenopus Tectum., Gao J, Ruan H, Qi X, Tao Y, Guo X, Shen W., Front Cell Neurosci. May 6, 2016; 10 221.              


Hmga2 is required for neural crest cell specification in Xenopus laevis., Macrì S, Simula L, Pellarin I, Pegoraro S, Onorati M, Sgarra R, Manfioletti G, Vignali R., Dev Biol. March 1, 2016; 411 (1): 25-37.                                        


A novel role for Ascl1 in the regulation of mesendoderm formation via HDAC-dependent antagonism of VegT., Gao L, Zhu X, Chen G, Ma X, Zhang Y, Zhang Y, Khand AA, Shi H, Gu F, Lin H, Chen Y, Zhang H, He L, Tao Q, Tao Q., Development. February 1, 2016; 143 (3): 492-503.                            


Differential requirement of bone morphogenetic protein receptors Ia (ALK3) and Ib (ALK6) in early embryonic patterning and neural crest development., Schille C, Heller J, Schambony A., BMC Dev Biol. January 19, 2016; 16 1.                          


Identification of p62/SQSTM1 as a component of non-canonical Wnt VANGL2-JNK signalling in breast cancer., Puvirajesinghe TM, Bertucci F, Jain A, Scerbo P, Belotti E, Audebert S, Sebbagh M, Lopez M, Brech A, Finetti P, Charafe-Jauffret E, Chaffanet M, Castellano R, Restouin A, Marchetto S, Collette Y, Gonçalvès A, Macara I, Birnbaum D, Kodjabachian L, Johansen T, Borg JP., Nat Commun. January 12, 2016; 7 10318.                                  


Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1., Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK., Dev Biol. January 1, 2016; 409 (1): 26-38.                


The evolution of basal progenitors in the developing non-mammalian brain., Nomura T, Ohtaka-Maruyama C, Yamashita W, Wakamatsu Y, Murakami Y, Calegari F, Suzuki K, Gotoh H, Ono K., Development. January 1, 2016; 143 (1): 66-74.          


An in vivo screen to identify candidate neurogenic genes in the developing Xenopus visual system., Bestman JE, Huang LC, Lee-Osbourne J, Cheung P, Cline HT., Dev Biol. December 15, 2015; 408 (2): 269-91.                    


Regeneration of Xenopus laevis spinal cord requires Sox2/3 expressing cells., Muñoz R, Edwards-Faret G, Moreno M, Zuñiga N, Cline H, Larraín J., Dev Biol. December 15, 2015; 408 (2): 229-43.                              


Kruppel-like factor family genes are expressed during Xenopus embryogenesis and involved in germ layer formation and body axis patterning., Gao Y, Cao Q, Lu L, Zhang X, Zhang Z, Zhang Z, Dong X, Jia W, Cao Y, Cao Y., Dev Dyn. October 1, 2015; 244 (10): 1328-46.                                    


Neural crest specification by Prohibitin1 depends on transcriptional regulation of prl3 and vangl1., Deichmann C, Link M, Seyfang M, Knotz V, Gradl D, Wedlich D., Genesis. October 1, 2015; 53 (10): 627-39.                


The Proto-oncogene Transcription Factor Ets1 Regulates Neural Crest Development through Histone Deacetylase 1 to Mediate Output of Bone Morphogenetic Protein Signaling., Wang C, Kam RK, Shi W, Xia Y, Chen X, Cao Y, Sun J, Du Y, Lu G, Chen Z, Chan WY, Chan SO, Deng Y, Zhao H., J Biol Chem. September 4, 2015; 290 (36): 21925-38.                  


Kcnip1 a Ca²⁺-dependent transcriptional repressor regulates the size of the neural plate in Xenopus., Néant I, Mellström B, Gonzalez P, Naranjo JR, Moreau M, Leclerc C., Biochim Biophys Acta. September 1, 2015; 1853 (9): 2077-85.  


Xenopus Pkdcc1 and Pkdcc2 Are Two New Tyrosine Kinases Involved in the Regulation of JNK Dependent Wnt/PCP Signaling Pathway., Vitorino M, Silva AC, Inácio JM, Ramalho JS, Gur M, Fainsod A, Steinbeisser H, Belo JA., PLoS One. August 13, 2015; 10 (8): e0135504.                                    


Connective-Tissue Growth Factor (CTGF/CCN2) Induces Astrogenesis and Fibronectin Expression of Embryonic Neural Cells In Vitro., Mendes FA, Coelho Aguiar JM, Kahn SA, Reis AH, Dubois LG, Romão LF, Ferreira LS, Chneiweiss H, Moura Neto V, Abreu JG., PLoS One. August 4, 2015; 10 (8): e0133689.              

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