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Nucleotide receptor P2RY4 is required for head formation via induction and maintenance of head organizer in Xenopus laevis. , Harata A, Hirakawa M, Sakuma T, Yamamoto T , Hashimoto C., Dev Growth Differ. February 1, 2019; 61 (2): 186-197.
The b-HLH transcription factor Hes3 participates in neural plate border formation by interfering with Wnt/ β-catenin signaling. , Hong CS , Saint-Jeannet JP ., Dev Biol. October 1, 2018; 442 (1): 162-172.
Dkk2 promotes neural crest specification by activating Wnt/ β-catenin signaling in a GSK3β independent manner. , Devotta A, Hong CS , Saint-Jeannet JP ., Elife. July 23, 2018; 7
Notch1 is asymmetrically distributed from the beginning of embryogenesis and controls the ventral center. , Castro Colabianchi AM, Revinski DR, Encinas PI, Baez MV, Monti RJ, Rodríguez Abinal M, Kodjabachian L , Franchini LF, López SL ., Development. July 17, 2018; 145 (14):
Transcriptomics of dorso- ventral axis determination in Xenopus tropicalis. , Monteiro RS , Gentsch GE , Smith JC ., Dev Biol. July 15, 2018; 439 (2): 69-79.
Retinoic acid-induced expression of Hnf1b and Fzd4 is required for pancreas development in Xenopus laevis. , Gere-Becker MB, Pommerenke C, Lingner T, Pieler T ., Development. June 8, 2018; 145 (12):
Pitx1 regulates cement gland development in Xenopus laevis through activation of transcriptional targets and inhibition of BMP signaling. , Jin Y, Weinstein DC ., Dev Biol. May 1, 2018; 437 (1): 41-49.
Timing is everything: Reiterative Wnt, BMP and RA signaling regulate developmental competence during endoderm organogenesis. , Rankin SA , Rankin SA , McCracken KW, Luedeke DM, Han L , Wells JM , Shannon JM, Zorn AM ., Dev Biol. February 1, 2018; 434 (1): 121-132.
RAPGEF5 Regulates Nuclear Translocation of β-Catenin. , Griffin JN, Del Viso F, Duncan AR, Robson A, Hwang W, Kulkarni S , Liu KJ , Liu KJ , Khokha MK ., Dev Cell. January 22, 2018; 44 (2): 248-260.e4.
ADMP controls the size of Spemann's organizer through a network of self-regulating expansion-restriction signals. , Leibovich A, Kot-Leibovich H, Ben-Zvi D, Fainsod A ., BMC Biol. January 22, 2018; 16 (1): 13.
microRNAs associated with early neural crest development in Xenopus laevis. , Ward NJ, Green D, Higgins J, Dalmay T, Münsterberg A, Moxon S, Wheeler GN ., BMC Genomics. January 18, 2018; 19 (1): 59.
Anosmin-1 is essential for neural crest and cranial placodes formation in Xenopus. , Bae CJ, Hong CS , Saint-Jeannet JP ., Biochem Biophys Res Commun. January 15, 2018; 495 (3): 2257-2263.
Xenbase: a genomic, epigenomic and transcriptomic model organism database. , Karimi K , Fortriede JD , Lotay VS , Burns KA , Wang DZ , Fisher ME , Fisher ME , Pells TJ , James-Zorn C , Wang Y, Ponferrada VG , Chu S , Chaturvedi P , Zorn AM , Vize PD ., Nucleic Acids Res. January 4, 2018; 46 (D1): D861-D868.
Znf703, a novel target of Pax3 and Zic1, regulates hindbrain and neural crest development in Xenopus. , Hong CS , Saint-Jeannet JP ., Genesis. December 1, 2017; 55 (12):
Xenopus laevis as a Model Organism for the Study of Spinal Cord Formation, Development, Function and Regeneration. , Borodinsky LN ., Front Neural Circuits. November 23, 2017; 11 90.
Vestigial-like 3 is a novel Ets1 interacting partner and regulates trigeminal nerve formation and cranial neural crest migration. , Simon E, Thézé N , Fédou S, Thiébaud P , Faucheux C., Biol Open. October 15, 2017; 6 (10): 1528-1540.
KDM3A-mediated demethylation of histone H3 lysine 9 facilitates the chromatin binding of Neurog2 during neurogenesis. , Lin H, Zhu X, Chen G, Song L, Gao L, Khand AA, Chen Y , Lin G , Tao Q , Tao Q ., Development. October 15, 2017; 144 (20): 3674-3685.
Angiopoietin-like 4 Is a Wnt Signaling Antagonist that Promotes LRP6 Turnover. , Kirsch N, Chang LS, Koch S, Glinka A , Dolde C, Colozza G , Benitez MDJ, De Robertis EM , Niehrs C ., Dev Cell. October 9, 2017; 43 (1): 71-82.e6.
Nodal/Activin Pathway is a Conserved Neural Induction Signal in Chordates. , Le Petillon Y, Luxardi G , Scerbo P , Cibois M, Leon A, Subirana L, Irimia M, Kodjabachian L , Escriva H, Bertrand S., Nat Ecol Evol. August 1, 2017; 1 (8): 1192-1200.
Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2. , Scerbo P , Marchal L, Kodjabachian L ., Elife. June 27, 2017; 6
Genome-wide analysis of dorsal and ventral transcriptomes of the Xenopus laevis gastrula. , Ding Y , Colozza G , Zhang K, Moriyama Y , Ploper D, Sosa EA, Benitez MDJ, De Robertis EM ., Dev Biol. June 15, 2017; 426 (2): 176-187.
Noggin is required for first pharyngeal arch differentiation in the frog Xenopus tropicalis. , Young JJ , Kjolby RAS, Wu G, Wong D, Hsu SW, Harland RM ., Dev Biol. June 15, 2017; 426 (2): 245-254.
A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo. , Blitz IL , Paraiso KD , Patrushev I , Chiu WTY , Cho KWY , Gilchrist MJ ., Dev Biol. June 15, 2017; 426 (2): 409-417.
Identification and comparative analyses of Siamois cluster genes in Xenopus laevis and tropicalis. , Haramoto Y , Saijyo T, Tanaka T, Furuno N , Suzuki A , Ito Y , Kondo M, Taira M , Takahashi S ., Dev Biol. June 15, 2017; 426 (2): 374-383.
MicroRNAs and ectodermal specification I. Identification of miRs and miR-targeted mRNAs in early anterior neural and epidermal ectoderm. , Shah VV , Soibam B, Ritter RA, Benham A, Oomen J, Sater AK ., Dev Biol. June 15, 2017; 426 (2): 200-210.
Dissecting BMP signaling input into the gene regulatory networks driving specification of the blood stem cell lineage. , Kirmizitas A, Meiklejohn S, Ciau-Uitz A , Stephenson R , Patient R ., Proc Natl Acad Sci U S A. June 6, 2017; 114 (23): 5814-5821.
Frizzled 3 acts upstream of Alcam during embryonic eye development. , Seigfried FA, Cizelsky W, Pfister AS, Dietmann P, Walther P, Kühl M , Kühl SJ ., Dev Biol. June 1, 2017; 426 (1): 69-83.
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition. , Wagner G, Singhal N, Nicetto D, Straub T, Kremmer E, Rupp RAW ., PLoS Genet. May 12, 2017; 13 (5): e1006757.
Collinear Hox-Hox interactions are involved in patterning the vertebrate anteroposterior (A-P) axis. , Zhu K , Spaink HP, Durston AJ ., PLoS One. April 11, 2017; 12 (4): e0175287.
Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis. , Ding Y , Ploper D, Sosa EA, Colozza G , Moriyama Y , Benitez MD, Zhang K, Merkurjev D, De Robertis EM ., Proc Natl Acad Sci U S A. April 11, 2017; 114 (15): E3081-E3090.
Tbx2 regulates anterior neural specification by repressing FGF signaling pathway. , Cho GS, Park DS, Choi SC, Han JK ., Dev Biol. January 15, 2017; 421 (2): 183-193.
Scaling of pattern formations and morphogen gradients. , Inomata H ., Dev Growth Differ. January 1, 2017; 59 (1): 41-51.
FoxD1 protein interacts with Wnt and BMP signaling to differentially pattern mesoderm and neural tissue. , Polevoy H, Malyarova A, Fonar Y, Elias S, Frank D ., Int J Dev Biol. January 1, 2017; 61 (3-4-5): 293-302.
Data on microRNAs and microRNA-targeted mRNAs in Xenopus ectoderm. , Shah VV , Soibam B, Ritter RA, Benham A, Oomen J, Sater AK ., Data Brief. October 14, 2016; 9 699-703.
Tbx3 represses bmp4 expression and, with Pax6, is required and sufficient for retina formation. , Motahari Z, Martinez-De Luna RI , Viczian AS , Zuber ME ., Development. October 1, 2016; 143 (19): 3560-3572.
Hedgehog-dependent E3-ligase Midline1 regulates ubiquitin-mediated proteasomal degradation of Pax6 during visual system development. , Pfirrmann T , Jandt E, Ranft S, Lokapally A, Neuhaus H , Perron M , Hollemann T ., Proc Natl Acad Sci U S A. September 6, 2016; 113 (36): 10103-8.
Structure of Gremlin-2 in Complex with GDF5 Gives Insight into DAN-Family-Mediated BMP Antagonism. , Nolan K, Kattamuri C, Rankin SA , Rankin SA , Read RJ, Zorn AM , Thompson TB., Cell Rep. August 23, 2016; 16 (8): 2077-2086.
The positive transcriptional elongation factor (P-TEFb) is required for neural crest specification. , Hatch VL , Marin-Barba M, Moxon S, Ford CT, Ward NJ, Tomlinson ML, Desanlis I, Hendry AE, Hontelez S , van Kruijsbergen I, Veenstra GJ , Münsterberg AE, Wheeler GN ., Dev Biol. August 15, 2016; 416 (2): 361-72.
Sf3b4-depleted Xenopus embryos: A model to study the pathogenesis of craniofacial defects in Nager syndrome. , Devotta A, Juraver-Geslin H , Gonzalez JA, Hong CS , Saint-Jeannet JP ., Dev Biol. July 15, 2016; 415 (2): 371-382.
Tissue- and stage-specific Wnt target gene expression is controlled subsequent to β-catenin recruitment to cis-regulatory modules. , Nakamura Y, de Paiva Alves E, Veenstra GJ , Hoppler S ., Development. June 1, 2016; 143 (11): 1914-25.
Identifying domains of EFHC1 involved in ciliary localization, ciliogenesis, and the regulation of Wnt signaling. , Zhao Y, Shi J, Winey M, Klymkowsky MW ., Dev Biol. March 15, 2016; 411 (2): 257-265.
A gradient of maternal Bicaudal-C controls vertebrate embryogenesis via translational repression of mRNAs encoding cell fate regulators. , Park S, Blaser S, Marchal MA, Houston DW , Sheets MD ., Development. March 1, 2016; 143 (5): 864-71.
A novel role for Ascl1 in the regulation of mesendoderm formation via HDAC-dependent antagonism of VegT. , Gao L, Zhu X, Chen G, Ma X, Zhang Y , Zhang Y , Khand AA, Shi H , Gu F, Lin H, Chen Y , Zhang H , He L, Tao Q , Tao Q ., Development. February 1, 2016; 143 (3): 492-503.
Neil DNA glycosylases promote substrate turnover by Tdg during DNA demethylation. , Schomacher L, Han D, Musheev MU, Arab K, Kienhöfer S, von Seggern A, Niehrs C ., Nat Struct Mol Biol. February 1, 2016; 23 (2): 116-124.
Noggin4 is a long-range inhibitor of Wnt8 signalling that regulates head development in Xenopus laevis. , Eroshkin FM, Nesterenko AM, Borodulin AV , Martynova NY, Ermakova GV, Gyoeva FK, Orlov EE, Belogurov AA, Lukyanov KA, Bayramov AV, Zaraisky AG ., Sci Rep. January 22, 2016; 6 23049.
Specification of anteroposterior axis by combinatorial signaling during Xenopus development. , Carron C, Shi DL ., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.
Noggin 1 overexpression in retinal progenitors affects bipolar cell generation. , Messina A, Bridi S, Bozza A, Bozzi Y, Baudet ML, Casarosa S., Int J Dev Biol. January 1, 2016; 60 (4-6): 151-7.
[Secreted Protein Noggin4 Participates in the Formation of Forebrain Structures in Xenopus laevis by Inhibiting
the Wnt/Beta-Catenin Signaling Pathway]. , Bayramov AV, Eroshkin FM, Borodulin AV , Yu Martynova N, Ermakova GV, Zaraisky AG ., Ontogenez. January 1, 2016; 47 (4): 229-34.
Embryonic transcription is controlled by maternally defined chromatin state. , Hontelez S , van Kruijsbergen I, Georgiou G, van Heeringen SJ, Bogdanovic O , Lister R, Veenstra GJC ., Nat Commun. December 18, 2015; 6 10148.
Affinity of the heparin binding motif of Noggin1 to heparan sulfate and its visualization in the embryonic tissues. , Nesterenko AM, Orlov EE, Ermakova GV, Ivanov IA, Semenyuk PI, Orlov VN, Martynova NY, Zaraisky AG ., Biochem Biophys Res Commun. December 4, 2015; 468 (1-2): 331-6.