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Summary Expression Phenotypes Gene Literature (547) GO Terms (27) Nucleotides (552) Proteins (48) Interactants (2335) Wiki
XB--484552

Papers associated with sox2



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referenced by:

Molecular mechanisms of hearing loss in Nager syndrome., Maharana SK, Saint-Jeannet JP., Dev Biol. August 1, 2021; 476 200-208.            

Independent pseudogenizations and losses of sox15 during amniote diversification following asymmetric ohnolog evolution., Ogita Y, Tamura K, Mawaribuchi S, Takamatsu N, Ito M., BMC Ecol Evol. June 30, 2021; 21 (1): 134.        

BMP signaling is enhanced intracellularly by FHL3 controlling WNT-dependent spatiotemporal emergence of the neural crest., Alkobtawi M, Pla P, Monsoro-Burq AH., Cell Rep. June 22, 2021; 35 (12): 109289.                        

The cytokine FAM3B/PANDER is an FGFR ligand that promotes posterior development in Xenopus., Zhang F, Zhu X, Wang P, He Q, Huang H, Zheng T, Li Y, Jia H, Xu L, Zhao H, Colozza G, Tao Q, De Robertis EM, Ding Y., Proc Natl Acad Sci U S A. May 18, 2021; 118 (20):           

Kindlin2 regulates neural crest specification via integrin-independent regulation of the FGF signaling pathway., Wang H, Wang C, Wang C, Wang C, Long Q, Zhang Y, Wang M, Liu J, Qi X, Cai D, Lu G, Sun J, Yao YG, Chan WY, Chan WY, Deng Y, Zhao H., Development. May 15, 2021; 148 (10):                                           

Pinhead antagonizes Admp to promote notochord formation., Itoh K, Ossipova O, Sokol SY., iScience. May 7, 2021; 24 (6): 102520.                            

Non-canonical Hedgehog signaling regulates spinal cord and muscle regeneration in Xenopus laevis larvae., Hamilton AM, Balashova OA, Borodinsky LN., Elife. May 6, 2021; 10                               

Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR, van Genesen S, Li Q, Grasso A, Frölich S, van der Sande M, van Heeringen SJ, Veenstra GJC., EMBO J. May 3, 2021; 40 (9): e104913.                        

Segregation of brain and organizer precursors is differentially regulated by Nodal signaling at blastula stage., Castro Colabianchi AM, Tavella MB, Boyadjián López LE, Rubinstein M, Franchini LF, López SL., Biol Open. February 25, 2021; 10 (2):                 

Retinoic acid production, regulation and containment through Zic1, Pitx2c and Cyp26c1 control cranial placode specification., Dubey A, Yu J, Liu T, Kane MA, Saint-Jeannet JP., Development. February 16, 2021; 148 (4):


Cellular response to spinal cord injury in regenerative and non-regenerative stages in Xenopus laevis., Edwards-Faret G, González-Pinto K, Cebrián-Silla A, Peñailillo J, García-Verdugo JM, Larraín J., Neural Dev. February 2, 2021; 16 (1): 2.                              

Establishing embryonic territories in the context of Wnt signaling., Velloso I, Maia LA, Amado NG, Reis AH, He X, Abreu JG., Int J Dev Biol. January 1, 2021; 65 (4-5-6): 227-233.      

Otic Neurogenesis in Xenopus laevis: Proliferation, Differentiation, and the Role of Eya1., Almasoudi SH, Schlosser G., Front Neuroanat. January 1, 2021; 15 722374.                                                    

Elucidating the framework for specification and determination of the embryonic retina., Louie SH, Fisher M, Grainger RM., Exp Cell Res. December 15, 2020; 397 (2): 112316.

Generation of a FOXH1 homozygous knockout human embryonic stem cell line by CRISPR/Cas9 system., Zhang T, Huang W, Xue X., Stem Cell Res. December 10, 2020; 50 102121.  

Wnt-inducible Lrp6-APEX2 interacting proteins identify ESCRT machinery and Trk-fused gene as components of the Wnt signaling pathway., Colozza G, Jami-Alahmadi Y, Dsouza A, Tejeda-Muñoz N, Albrecht LV, Sosa EA, Wohlschlegel JA, De Robertis EM., Sci Rep. December 9, 2020; 10 (1): 21555.            

Mcrs1 interacts with Six1 to influence early craniofacial and otic development., Neilson KM, Keer S, Bousquet N, Macrorie O, Majumdar HD, Kenyon KL, Alfandari D, Alfandari D, Moody SA., Dev Biol. November 1, 2020; 467 (1-2): 39-50.                  

Dynamic expression of MMP28 during cranial morphogenesis., Gouignard N, Theveneau E, Saint-Jeannet JP., Philos Trans R Soc Lond B Biol Sci. October 12, 2020; 375 (1809): 20190559.

Amphibian thalamic nuclear organization during larval development and in the adult frog Xenopus laevis: Genoarchitecture and hodological analysis., Morona R, Bandín S, López JM, Moreno N, González A., J Comp Neurol. October 1, 2020; 528 (14): 2361-2403.                                                                

TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis., Chen M, Amado N, Tan J, Reis A, Ge M, Abreu JG, He X., Elife. September 14, 2020; 9                                                                                           

Maximizing CRISPR/Cas9 phenotype penetrance applying predictive modeling of editing outcomes in Xenopus and zebrafish embryos., Naert T, Tulkens D, Edwards NA, Carron M, Shaidani NI, Wlizla M, Boel A, Demuynck S, Horb ME, Coucke P, Willaert A, Zorn AM, Vleminckx K, Vleminckx K., Sci Rep. September 4, 2020; 10 (1): 14662.                      

Apcdd1 is a dual BMP/Wnt inhibitor in the developing nervous system and skin., Vonica A, Bhat N, Phan K, Guo J, Iancu L, Weber JA, Karger A, Cain JW, Wang ECE, DeStefano GM, O'Donnell-Luria AH, Christiano AM, Riley B, Butler SJ, Luria V., Dev Biol. August 1, 2020; 464 (1): 71-87.      

The transcription factor Hypermethylated in Cancer 1 (Hic1) regulates neural crest migration via interaction with Wnt signaling., Ray H, Chang C., Dev Biol. July 15, 2020; 463 (2): 169-181.                

Dach1 regulates neural crest migration during embryonic development., Kim YK, Lee H, Ismail T, Kim Y, Lee HS., Biochem Biophys Res Commun. July 5, 2020; 527 (4): 896-901.        

Long-term association of a transcription factor with its chromatin binding site can stabilize gene expression and cell fate commitment., Gurdon JB, Javed K, Vodnala M, Garrett N., Proc Natl Acad Sci U S A. June 30, 2020; 117 (26): 15075-15084.            

Natural size variation among embryos leads to the corresponding scaling in gene expression., Leibovich A, Edri T, Klein SL, Moody SA, Fainsod A., Dev Biol. June 15, 2020; 462 (2): 165-179.                    

Chromatin accessibility dynamics and single cell RNA-Seq reveal new regulators of regeneration in neural progenitors., Kakebeen AD, Chitsazan AD, Williams MC, Saunders LM, Wills AE., Elife. April 27, 2020; 9                             

Heparan sulfate proteoglycans regulate BMP signalling during neural crest induction., Pegge J, Tatsinkam AJ, Rider CC, Bell E., Dev Biol. April 15, 2020; 460 (2): 108-114.        

Xenopus embryos show a compensatory response following perturbation of the Notch signaling pathway., Solini GE, Pownall ME, Hillenbrand MJ, Tocheny CE, Paudel S, Halleran AD, Bianchi CH, Huyck RW, Saha MS., Dev Biol. April 15, 2020; 460 (2): 99-107.        

Model systems for regeneration: Xenopus., Phipps LS, Marshall L, Dorey K, Amaya E., Development. March 19, 2020; 147 (6):           

The Actin-Family Protein Arp4 Is a Novel Suppressor for the Formation and Functions of Nuclear F-Actin., Yamazaki S, Gerhold C, Yamamoto K, Ueno Y, Grosse R, Miyamoto K, Harata M., Cells. March 19, 2020; 9 (3):           

FAM46B is a prokaryotic-like cytoplasmic poly(A) polymerase essential in human embryonic stem cells., Hu JL, Liang H, Zhang H, Yang MZ, Sun W, Zhang P, Luo L, Feng JX, Bai H, Liu F, Zhang T, Yang JY, Gao Q, Long Y, Ma XY, Chen Y, Zhong Q, Yu B, Liao S, Wang Y, Zhao Y, Zeng MS, Cao N, Wang J, Chen W, Yang HT, Gao S., Nucleic Acids Res. March 18, 2020; 48 (5): 2733-2748.                

The AP-1 transcription factor JunB functions in Xenopus tail regeneration by positively regulating cell proliferation., Nakamura M, Yoshida H, Takahashi E, Wlizla M, Takebayashi-Suzuki K, Horb ME, Suzuki A., Biochem Biophys Res Commun. February 19, 2020; 522 (4): 990-995.              

Role of TrkA signaling during tadpole tail regeneration and early embryonic development in Xenopus laevis., Iimura A, Nishida E, Kusakabe M., Genes Cells. February 1, 2020; 25 (2): 86-99.                

d-Glucuronolactone attenuates para-xylene-induced defects in neuronal development and plasticity in Xenopus tectum in vivo., Liao Y, Luo Y, Ding N, Gao J, Wang X, Shen W., Toxicology. January 30, 2020; 430 152341.

The histone methyltransferase KMT2D, mutated in Kabuki syndrome patients, is required for neural crest cell formation and migration., Schwenty-Lara J, Nehl D, Borchers A., Hum Mol Genet. January 15, 2020; 29 (2): 305-319.                

The Stemness Gene Mex3A Is a Key Regulator of Neuroblast Proliferation During Neurogenesis., Naef V, De Sarlo M, Testa G, Corsinovi D, Azzarelli R, Borello U, Ori M., Front Cell Dev Biol. January 1, 2020; 8 549533.            

Isl1 Regulation of Nkx2.1 in the Early Foregut Epithelium Is Required for Trachea-Esophageal Separation and Lung Lobation., Kim E, Jiang M, Huang H, Zhang Y, Tjota N, Gao X, Robert J, Gilmore N, Gan L, Que J., Dev Cell. December 16, 2019; 51 (6): 675-683.e4.          

Endosome-Mediated Epithelial Remodeling Downstream of Hedgehog-Gli Is Required for Tracheoesophageal Separation., Nasr T, Mancini P, Rankin SA, Rankin SA, Edwards NA, Agricola ZN, Kenny AP, Kinney JL, Daniels K, Vardanyan J, Han L, Trisno SL, Cha SW, Wells JM, Kofron MJ, Zorn AM., Dev Cell. December 16, 2019; 51 (6): 665-674.e6.                  

Trpc1 as the Missing Link Between the Bmp and Ca2+ Signalling Pathways During Neural Specification in Amphibians., Néant I, Leung HC, Webb SE, Miller AL, Miller AL, Moreau M, Leclerc C., Sci Rep. November 5, 2019; 9 (1): 16049.                                    

Nutrient restriction causes reversible G2 arrest in Xenopus neural progenitors., McKeown CR, Cline HT., Development. October 24, 2019; 146 (20):             

Proliferative regulation of alveolar epithelial type 2 progenitor cells by human Scnn1d gene., Zhao R, Ali G, Chang J, Komatsu S, Tsukasaki Y, Nie HG, Chang Y, Zhang M, Liu Y, Jain K, Jung BG, Samten B, Jiang D, Liang J, Ikebe M, Matthay MA, Ji HL., Theranostics. October 18, 2019; 9 (26): 8155-8170.                        

Maternal pluripotency factors initiate extensive chromatin remodelling to predefine first response to inductive signals., Gentsch GE, Spruce T, Owens NDL, Smith JC., Nat Commun. September 19, 2019; 10 (1): 4269.                                        

BAP1 regulates epigenetic switch from pluripotency to differentiation in developmental lineages giving rise to BAP1-mutant cancers., Kuznetsov JN, Aguero TH, Owens DA, Kurtenbach S, Field MG, Durante MA, Rodriguez DA, King ML, Harbour JW., Sci Adv. September 18, 2019; 5 (9): eaax1738.        

PTK7 proteolytic fragment proteins function during early Xenopus development., Lichtig H, Cohen Y, Bin-Nun N, Golubkov V, Frank D., Dev Biol. September 1, 2019; 453 (1): 48-55.        

Cdc2-like kinase 2 (Clk2) promotes early neural development in Xenopus embryos., Virgirinia RP, Jahan N, Okada M, Takebayashi-Suzuki K, Yoshida H, Nakamura M, Akao H, Yoshimoto Y, Fatchiyah F, Ueno N, Suzuki A., Dev Growth Differ. August 1, 2019; 61 (6): 365-377.                              

Molecular markers for corneal epithelial cells in larval vs. adult Xenopus frogs., Sonam S, Srnak JA, Perry KJ, Henry JJ., Exp Eye Res. July 1, 2019; 184 107-125.                        

A Critical E-box in Barhl1 3' Enhancer Is Essential for Auditory Hair Cell Differentiation., Hou K, Jiang H, Karim MR, Zhong C, Xu Z, Liu L, Guan M, Shao J, Huang X., Cells. May 15, 2019; 8 (5):               

Epithelial-Mesenchymal Transition Promotes the Differentiation Potential of Xenopus tropicalis Immature Sertoli Cells., Nguyen TMX, Vegrichtova M, Tlapakova T, Krulova M, Krylov V., Stem Cells Int. May 5, 2019; 2019 8387478.                                            

Calcium Activity Dynamics Correlate with Neuronal Phenotype at a Single Cell Level and in a Threshold-Dependent Manner., Paudel S, Ablondi E, Sehdev M, Marken J, Halleran A, Rahman A, Kemper P, Saha MS., Int J Mol Sci. April 16, 2019; 20 (8):                       

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