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Xenopus laevis as a Model Organism for the Study of Spinal Cord Formation, Development, Function and Regeneration. , Borodinsky LN ., Front Neural Circuits. November 23, 2017; 11 90.
A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates. , Plouhinec JL, Medina-Ruiz S, Borday C, Bernard E, Vert JP, Eisen MB, Harland RM , Monsoro-Burq AH ., PLoS Biol. October 19, 2017; 15 (10): e2004045.
Nodal/Activin Pathway is a Conserved Neural Induction Signal in Chordates. , Le Petillon Y, Luxardi G , Scerbo P , Cibois M, Leon A, Subirana L, Irimia M, Kodjabachian L , Escriva H, Bertrand S., Nat Ecol Evol. August 1, 2017; 1 (8): 1192-1200.
Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2. , Scerbo P , Marchal L, Kodjabachian L ., Elife. June 27, 2017; 6
Dissecting BMP signaling input into the gene regulatory networks driving specification of the blood stem cell lineage. , Kirmizitas A, Meiklejohn S, Ciau-Uitz A , Stephenson R , Patient R ., Proc Natl Acad Sci U S A. June 6, 2017; 114 (23): 5814-5821.
A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs. , Charney RM , Paraiso KD , Blitz IL , Cho KWY., Semin Cell Dev Biol. June 1, 2017; 66 12-24.
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition. , Wagner G, Singhal N, Nicetto D, Straub T, Kremmer E, Rupp RAW ., PLoS Genet. May 12, 2017; 13 (5): e1006757.
Coordinating heart morphogenesis: A novel role for hyperpolarization-activated cyclic nucleotide-gated (HCN) channels during cardiogenesis in Xenopus laevis. , Pitcairn E, Harris H, Epiney J, Pai VP , Lemire JM , Ye B, Shi NQ, Levin M , McLaughlin KA ., Commun Integr Biol. May 10, 2017; 10 (3): e1309488.
Genomic integration of Wnt/ β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs. , Stevens ML , Chaturvedi P , Rankin SA , Rankin SA , Macdonald M, Jagannathan S, Yukawa M, Barski A, Zorn AM ., Development. April 1, 2017; 144 (7): 1283-1295.
Embryoids, organoids and gastruloids: new approaches to understanding embryogenesis. , Simunovic M, Brivanlou AH ., Development. March 15, 2017; 144 (6): 976-985.
Ubiquitin C-terminal hydrolase37 regulates Tcf7 DNA binding for the activation of Wnt signalling. , Han W, Lee H , Lee H , Han JK ., Sci Rep. February 15, 2017; 7 42590.
Tbx2 regulates anterior neural specification by repressing FGF signaling pathway. , Cho GS, Park DS, Choi SC, Han JK ., Dev Biol. January 15, 2017; 421 (2): 183-193.
Scaling of pattern formations and morphogen gradients. , Inomata H ., Dev Growth Differ. January 1, 2017; 59 (1): 41-51.
What we can learn from a tadpole about ciliopathies and airway diseases: Using systems biology in Xenopus to study cilia and mucociliary epithelia. , Walentek P , Quigley IK ., Genesis. January 1, 2017; 55 (1-2):
FoxD1 protein interacts with Wnt and BMP signaling to differentially pattern mesoderm and neural tissue. , Polevoy H, Malyarova A, Fonar Y, Elias S, Frank D ., Int J Dev Biol. January 1, 2017; 61 (3-4-5): 293-302.
Expression of the ALK1 family of type I BMP/ADMP receptors during gastrula stages in Xenopus embryos. , Leibovich A, Steinbeißer H, Fainsod A ., Int J Dev Biol. January 1, 2017; 61 (6-7): 465-470.
The MLL/Setd1b methyltransferase is required for the Spemann's organizer gene activation in Xenopus. , Lin H, Min Z, Tao Q , Tao Q ., Mech Dev. November 1, 2016; 142 1-9.
Ascl1 represses the mesendoderm induction in Xenopus. , Min Z, Lin H, Zhu X, Gao L, Khand AA, Tao Q ., Acta Biochim Biophys Sin (Shanghai). November 1, 2016; 48 (11): 1006-1015.
Data on microRNAs and microRNA-targeted mRNAs in Xenopus ectoderm. , Shah VV , Soibam B, Ritter RA, Benham A, Oomen J, Sater AK ., Data Brief. October 14, 2016; 9 699-703.
Chlorpyrifos exposure affects fgf8, sox9, and bmp4 expression required for cranial neural crest morphogenesis and chondrogenesis in Xenopus laevis embryos. , Tussellino M, Ronca R, Carotenuto R, Pallotta MM, Furia M, Capriglione T., Environ Mol Mutagen. October 1, 2016; 57 (8): 630-640.
Tbx3 represses bmp4 expression and, with Pax6, is required and sufficient for retina formation. , Motahari Z, Martinez-De Luna RI , Viczian AS , Zuber ME ., Development. October 1, 2016; 143 (19): 3560-3572.
Hedgehog-dependent E3-ligase Midline1 regulates ubiquitin-mediated proteasomal degradation of Pax6 during visual system development. , Pfirrmann T , Jandt E, Ranft S, Lokapally A, Neuhaus H , Perron M , Hollemann T ., Proc Natl Acad Sci U S A. September 6, 2016; 113 (36): 10103-8.
Syndecan4 coordinates Wnt/JNK and BMP signaling to regulate foregut progenitor development. , Zhang Z , Zhang Z , Rankin SA , Rankin SA , Zorn AM ., Dev Biol. August 1, 2016; 416 (1): 187-199.
Sf3b4-depleted Xenopus embryos: A model to study the pathogenesis of craniofacial defects in Nager syndrome. , Devotta A, Juraver-Geslin H , Gonzalez JA, Hong CS , Saint-Jeannet JP ., Dev Biol. July 15, 2016; 415 (2): 371-382.
A Retinoic Acid- Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification. , Rankin SA , Rankin SA , Han L , McCracken KW, Kenny AP , Anglin CT, Grigg EA, Crawford CM, Wells JM , Shannon JM, Zorn AM ., Cell Rep. June 28, 2016; 16 (1): 66-78.
Activation of a T-box- Otx2- Gsc gene network independent of TBP and TBP-related factors. , Gazdag E, Jacobi UG, van Kruijsbergen I, Weeks DL , Veenstra GJ ., Development. April 15, 2016; 143 (8): 1340-50.
Identifying domains of EFHC1 involved in ciliary localization, ciliogenesis, and the regulation of Wnt signaling. , Zhao Y, Shi J, Winey M, Klymkowsky MW ., Dev Biol. March 15, 2016; 411 (2): 257-265.
Using Xenopus to study genetic kidney diseases. , Lienkamp SS ., Semin Cell Dev Biol. March 1, 2016; 51 117-24.
Making muscle: Morphogenetic movements and molecular mechanisms of myogenesis in Xenopus laevis. , Sabillo A, Ramirez J, Domingo CR ., Semin Cell Dev Biol. March 1, 2016; 51 80-91.
Noggin4 is a long-range inhibitor of Wnt8 signalling that regulates head development in Xenopus laevis. , Eroshkin FM, Nesterenko AM, Borodulin AV , Martynova NY, Ermakova GV, Gyoeva FK, Orlov EE, Belogurov AA, Lukyanov KA, Bayramov AV, Zaraisky AG ., Sci Rep. January 22, 2016; 6 23049.
Differential requirement of bone morphogenetic protein receptors Ia (ALK3) and Ib (ALK6) in early embryonic patterning and neural crest development. , Schille C, Heller J, Schambony A ., BMC Dev Biol. January 19, 2016; 16 1.
Specification of anteroposterior axis by combinatorial signaling during Xenopus development. , Carron C, Shi DL ., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.
Monitoring Smad Activity In Vivo Using the Xenopus Model System. , Montagner M, Martello G , Piccolo S ., Methods Mol Biol. January 1, 2016; 1344 245-59.
Regeneration of Thyroid Function by Transplantation of Differentiated Pluripotent Stem Cells. , Kurmann AA, Serra M, Hawkins F, Rankin SA , Rankin SA , Mori M, Astapova I, Ullas S, Lin S, Bilodeau M, Rossant J, Jean JC, Ikonomou L, Deterding RR, Shannon JM, Zorn AM , Hollenberg AN, Kotton DN., Cell Stem Cell. November 5, 2015; 17 (5): 527-42.
GATA2 regulates Wnt signaling to promote primitive red blood cell fate. , Mimoto MS, Kwon S, Green YS, Goldman D, Christian JL ., Dev Biol. November 1, 2015; 407 (1): 1-11.
The small leucine-rich repeat secreted protein Asporin induces eyes in Xenopus embryos through the IGF signalling pathway. , Luehders K, Sasai N, Davaapil H, Kurosawa-Yoshida M, Hiura H, Brah T, Ohnuma S ., Development. October 1, 2015; 142 (19): 3351-61.
The Proto-oncogene Transcription Factor Ets1 Regulates Neural Crest Development through Histone Deacetylase 1 to Mediate Output of Bone Morphogenetic Protein Signaling. , Wang C , Kam RK, Shi W, Xia Y, Chen X, Cao Y , Sun J, Du Y, Lu G, Chen Z, Chan WY, Chan SO, Deng Y, Zhao H ., J Biol Chem. September 4, 2015; 290 (36): 21925-38.
Functional analysis of Hairy genes in Xenopus neural crest initial specification and cell migration. , Vega-López GA, Bonano M, Tríbulo C, Fernández JP, Agüero TH, Aybar MJ , Aybar MJ ., Dev Dyn. August 1, 2015; 244 (8): 988-1013.
Predicting Variabilities in Cardiac Gene Expression with a Boolean Network Incorporating Uncertainty. , Grieb M, Burkovski A, Sträng JE, Kraus JM, Groß A, Palm G, Kühl M , Kestler HA., PLoS One. July 16, 2015; 10 (7): e0131832.
Small C-terminal Domain Phosphatase 3 Dephosphorylates the Linker Sites of Receptor-regulated Smads (R-Smads) to Ensure Transforming Growth Factor β (TGFβ)-mediated Germ Layer Induction in Xenopus Embryos. , Sun G , Hu Z, Min Z, Yan X, Guan Z, Su H, Fu Y, Ma X, Chen YG , Zhang MQ, Tao Q , Wu W., J Biol Chem. July 10, 2015; 290 (28): 17239-49.
BMP signalling controls the construction of vertebrate mucociliary epithelia. , Cibois M, Luxardi G , Chevalier B, Thomé V, Mercey O, Zaragosi LE , Barbry P, Pasini A, Marcet B, Kodjabachian L ., Development. July 1, 2015; 142 (13): 2352-63.
Kdm2a/b Lysine Demethylases Regulate Canonical Wnt Signaling by Modulating the Stability of Nuclear β-Catenin. , Lu L, Gao Y, Zhang Z , Cao Q, Zhang X, Zou J, Cao Y ., Dev Cell. June 22, 2015; 33 (6): 660-74.
Molecular mechanism of CHRDL1-mediated X-linked megalocornea in humans and in Xenopus model. , Pfirrmann T , Emmerich D, Ruokonen P, Quandt D, Buchen R, Fischer-Zirnsak B, Hecht J, Krawitz P, Meyer P, Klopocki E, Stricker S , Lausch E, Seliger B, Hollemann T , Reinhard T, Auw-Haedrich C, Zabel B, Hoffmann K, Villavicencio-Lorini P., Hum Mol Genet. June 1, 2015; 24 (11): 3119-32.
Temporally coordinated signals progressively pattern the anteroposterior and dorsoventral body axes. , Tuazon FB, Mullins MC., Semin Cell Dev Biol. June 1, 2015; 42 118-33.
Centrin-2 (Cetn2) mediated regulation of FGF/FGFR gene expression in Xenopus. , Shi J, Zhao Y, Vonderfecht T, Winey M, Klymkowsky MW ., Sci Rep. May 27, 2015; 5 10283.
The prodomain of BMP4 is necessary and sufficient to generate stable BMP4/7 heterodimers with enhanced bioactivity in vivo. , Neugebauer JM, Kwon S, Kim HS , Donley N, Tilak A, Sopory S, Christian JL ., Proc Natl Acad Sci U S A. May 5, 2015; 112 (18): E2307-16.
Hematopoiesis: from start to immune reconstitution potential. , Liang HC, Zúñiga-Pflücker JC., Stem Cell Res Ther. April 11, 2015; 6 52.
Notum is required for neural and head induction via Wnt deacylation, oxidation, and inactivation. , Zhang X, Cheong SM, Amado NG, Reis AH, MacDonald BT, Zebisch M, Jones EY, Abreu JG , He X ., Dev Cell. March 23, 2015; 32 (6): 719-30.
Axis Patterning by BMPs: Cnidarian Network Reveals Evolutionary Constraints. , Genikhovich G, Fried P, Prünster MM, Schinko JB, Gilles AF, Fredman D, Meier K, Iber D, Technau U., Cell Rep. March 17, 2015; 10 (10): 1646-1654.
The requirement of histone modification by PRDM12 and Kdm4a for the development of pre-placodal ectoderm and neural crest in Xenopus. , Matsukawa S , Miwata K, Asashima M , Michiue T ., Dev Biol. March 1, 2015; 399 (1): 164-176.