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Summary Expression Phenotypes Gene Literature (48) GO Terms (10) Nucleotides (265) Proteins (64) Interactants (415) Wiki
XB-GENEPAGE-479246

Papers associated with foxd4l1.1



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Characterization of a subfamily of related winged helix genes, XFD-12/12'/12" (XFLIP), during Xenopus embryogenesis., Sölter M, Köster M, Hollemann T, Brey A, Pieler T, Knöchel W., Mech Dev. December 1, 1999; 89 (1-2): 161-5.                  

Neuroectodermal specification and regionalization of the Spemann organizer in Xenopus., Fetka I, Doederlein G, Bouwmeester T., Mech Dev. May 1, 2000; 93 (1-2): 49-58.          

foxD5a, a Xenopus winged helix gene, maintains an immature neural ectoderm via transcriptional repression that is dependent on the C-terminal domain., Sullivan SA, Akers L, Moody SA., Dev Biol. April 15, 2001; 232 (2): 439-57.            

A downstream enhancer is essential for Xenopus FoxD5 transcription., Schön C, Köster M, Knöchel W., Biochem Biophys Res Commun. December 24, 2004; 325 (4): 1360-6.            

Of Fox and Frogs: Fox (fork head/winged helix) transcription factors in Xenopus development., Pohl BS, Knöchel W., Gene. January 3, 2005; 344 21-32.      

Identification of novel genes affecting mesoderm formation and morphogenesis through an enhanced large scale functional screen in Xenopus., Chen JA, Voigt J, Gilchrist M, Papalopulu N, Amaya E., Mech Dev. March 1, 2005; 122 (3): 307-31.                                                                                                                      

Genomic analysis of Xenopus organizer function., Hufton AL, Vinayagam A, Suhai S, Baker JC., BMC Dev Biol. June 6, 2006; 6 27.                  

The competence of Xenopus blastomeres to produce neural and retinal progeny is repressed by two endo-mesoderm promoting pathways., Yan B, Moody SA., Dev Biol. May 1, 2007; 305 (1): 103-19.        

Characterisation of the fibroblast growth factor dependent transcriptome in early development., Branney PA, Faas L, Steane SE, Pownall ME, Isaacs HV., PLoS One. January 1, 2009; 4 (3): e4951.            

foxD5 plays a critical upstream role in regulating neural ectodermal fate and the onset of neural differentiation., Yan B, Neilson KM, Moody SA., Dev Biol. May 1, 2009; 329 (1): 80-95.              

Notch signaling downstream of foxD5 promotes neural ectodermal transcription factors that inhibit neural differentiation., Yan B, Neilson KM, Moody SA., Dev Dyn. June 1, 2009; 238 (6): 1358-65.        

BMP inhibition initiates neural induction via FGF signaling and Zic genes., Marchal L, Luxardi G, Thomé V, Kodjabachian L., Proc Natl Acad Sci U S A. October 13, 2009; 106 (41): 17437-42.        

Microarray identification of novel downstream targets of FoxD4L1/D5, a critical component of the neural ectodermal transcriptional network., Yan B, Neilson KM, Moody SA., Dev Dyn. December 1, 2010; 239 (12): 3467-80.                  

The response of early neural genes to FGF signaling or inhibition of BMP indicate the absence of a conserved neural induction module., Rogers CD, Ferzli GS, Casey ES., BMC Dev Biol. January 26, 2011; 11 74.        

A revised model of Xenopus dorsal midline development: differential and separable requirements for Notch and Shh signaling., Peyrot SM, Wallingford JB, Harland RM., Dev Biol. April 15, 2011; 352 (2): 254-66.                              

Specific domains of FoxD4/5 activate and repress neural transcription factor genes to control the progression of immature neural ectoderm to differentiating neural plate., Neilson KM, Klein SL, Mhaske P, Mood K, Daar IO, Moody SA., Dev Biol. May 15, 2012; 365 (2): 363-75.                        

Suv4-20h histone methyltransferases promote neuroectodermal differentiation by silencing the pluripotency-associated Oct-25 gene., Nicetto D, Hahn M, Jung J, Schneider TD, Straub T, David R, Schotta G, Rupp RA., PLoS Genet. January 1, 2013; 9 (1): e1003188.                                                                

AP-1(c-Jun/FosB) mediates xFoxD5b expression in Xenopus early developmental neurogenesis., Yoon J, Kim JH, Lee OJ, Lee SY, Lee SH, Park JB, Lee JY, Kim SC, Kim J., Int J Dev Biol. January 1, 2013; 57 (11-12): 865-72.        

Conserved structural domains in FoxD4L1, a neural forkhead box transcription factor, are required to repress or activate target genes., Klein SL, Neilson KM, Orban J, Yaklichkin S, Hoffbauer J, Mood K, Daar IO, Moody SA., PLoS One. April 4, 2013; 8 (4): e61845.                  

WNK4 is an essential effector of anterior formation in FGF signaling., Shimizu M, Goto T, Sato A, Shibuya H., Genes Cells. June 1, 2013; 18 (6): 442-9.        

On becoming neural: what the embryo can tell us about differentiating neural stem cells., Moody SA, Klein SL, Karpinski BA, Maynard TM, Lamantia AS., Am J Stem Cells. June 30, 2013; 2 (2): 74-94.              

ERF and ETV3L are retinoic acid-inducible repressors required for primary neurogenesis., Janesick A, Abbey R, Chung C, Liu S, Taketani M, Blumberg B., Development. August 1, 2013; 140 (15): 3095-106.                                                              

PV.1 suppresses the expression of FoxD5b during neural induction in Xenopus embryos., Yoon J, Kim JH, Kim SC, Park JB, Lee JY, Kim J., Mol Cells. March 1, 2014; 37 (3): 220-5.        

Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification., Yasuoka Y, Suzuki Y, Takahashi S, Someya H, Sudou N, Haramoto Y, Cho KW, Asashima M, Sugano S, Taira M., Nat Commun. July 9, 2014; 5 4322.        

Neural transcription factors: from embryos to neural stem cells., Lee HK, Lee HS, Moody SA., Mol Cells. October 31, 2014; 37 (10): 705-12.    

Early neural ectodermal genes are activated by Siamois and Twin during blastula stages., Klein SL, Moody SA., Genesis. May 1, 2015; 53 (5): 308-20.          

Neural transcription factors bias cleavage stage blastomeres to give rise to neural ectoderm., Gaur S, Mandelbaum M, Herold M, Majumdar HD, Neilson KM, Maynard TM, Mood K, Daar IO, Moody SA., Genesis. June 1, 2016; 54 (6): 334-49.                          

Pa2G4 is a novel Six1 co-factor that is required for neural crest and otic development., Neilson KM, Abbruzzesse G, Kenyon K, Bartolo V, Krohn P, Alfandari D, Alfandari D, Moody SA., Dev Biol. January 15, 2017; 421 (2): 171-182.                    

Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition., Wagner G, Singhal N, Nicetto D, Straub T, Kremmer E, Rupp RAW., PLoS Genet. May 12, 2017; 13 (5): e1006757.                                    

Foxd4 is essential for establishing neural cell fate and for neuronal differentiation., Sherman JH, Karpinski BA, Fralish MS, Cappuzzo JM, Dhindsa DS, Thal AG, Moody SA, LaMantia AS, Maynard TM., Genesis. June 1, 2017; 55 (6):   

Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2., Scerbo P, Marchal L, Kodjabachian L., Elife. June 27, 2017; 6                               

Nodal/Activin Pathway is a Conserved Neural Induction Signal in Chordates., Le Petillon Y, Luxardi G, Scerbo P, Cibois M, Leon A, Subirana L, Irimia M, Kodjabachian L, Escriva H, Bertrand S., Nat Ecol Evol. August 1, 2017; 1 (8): 1192-1200.                                

Wbp2nl has a developmental role in establishing neural and non-neural ectodermal fates., Marchak A, Grant PA, Neilson KM, Datta Majumdar H, Yaklichkin S, Johnson D, Moody SA., Dev Biol. September 1, 2017; 429 (1): 213-224.                    

Xbra and Smad-1 cooperate to activate the transcription of neural repressor ventx1.1 in Xenopus embryos., Kumar S, Kumar S, Umair Z, Yoon J, Lee U, Kim SC, Park JB, Lee JY, Kim J., Sci Rep. July 30, 2018; 8 (1): 11391.                

Ventx1.1 as a Direct Repressor of Early Neural Gene zic3 in Xenopus laevis., Umair Z, Kumar S, Kim DH, Rafiq K, Kumar V, Kim S, Park JB, Lee JY, Lee U, Kim J., Mol Cells. December 31, 2018; 41 (12): 1061-1071.          

Skeletal muscle differentiation drives a dramatic downregulation of RNA polymerase III activity and differential expression of Polr3g isoforms., McQueen C, Hughes GL, Pownall ME., Dev Biol. October 1, 2019; 454 (1): 74-84.                        

Pinhead signaling regulates mesoderm heterogeneity via FGF receptor-dependent pathway., Ossipova O, Itoh K, Radu A, Ezan J, Sokol SY., Development. January 1, 2020;                                       

miR-199 plays both positive and negative regulatory roles in Xenopus eye development., Ritter RA, Ulrich CH, Brzezinska BN, Shah VV, Zamora MJ, Kelly LE, El-Hodiri HM, Sater AK., Genesis. March 1, 2020; 58 (3-4): e23354.                        

Natural size variation among embryos leads to the corresponding scaling in gene expression., Leibovich A, Edri T, Klein SL, Moody SA, Fainsod A., Dev Biol. June 15, 2020; 462 (2): 165-179.                    

Foxd4l1.1 negatively regulates transcription of neural repressor ventx1.1 during neuroectoderm formation in Xenopus embryos., Kumar S, Kumar S, Umair Z, Kumar V, Kumar S, Lee U, Kim J., Sci Rep. October 8, 2020; 10 (1): 16780.            

Dusp1 modulates activin/smad2 mediated germ layer specification via FGF signal inhibition in Xenopus embryos., Umair Z, Kumar S, Rafiq K, Kumar V, Reman ZU, Lee SH, Kim S, Lee JY, Lee U, Kim J., Anim Cells Syst (Seoul). November 27, 2020; 24 (6): 359-370.            

Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR, van Genesen S, Li Q, Grasso A, Frölich S, van der Sande M, van Heeringen SJ, Veenstra GJC., EMBO J. May 3, 2021; 40 (9): e104913.                        

Smad2 and Smad3 differentially modulate chordin transcription via direct binding on the distal elements in gastrula Xenopus embryos., Kumar V, Umair Z, Kumar S, Kumar S, Lee U, Kim J., Biochem Biophys Res Commun. June 25, 2021; 559 168-175.          

A systemic cell cycle block impacts stage-specific histone modification profiles during Xenopus embryogenesis., Pokrovsky D, Forné I, Straub T, Imhof A, Rupp RAW., PLoS Biol. September 1, 2021; 19 (9): e3001377.                        

Foxd4l1.1 Negatively Regulates Chordin Transcription in Neuroectoderm of Xenopus Gastrula., Kumar V, Goutam RS, Umair Z, Park S, Lee U, Kim J., Cells. October 17, 2021; 10 (10):             

Goosecoid Controls Neuroectoderm Specification via Dual Circuits of Direct Repression and Indirect Stimulation in Xenopus Embryos., Umair Z, Kumar V, Goutam RS, Kumar S, Kumar S, Lee U, Kim J., Mol Cells. October 31, 2021; 44 (10): 723-735.          

Bmp4 Synexpression Gene, Sizzled, Transcription Is Collectively Modulated by Smad1 and Ventx1.1/Ventx2.1 in Early Xenopus Embryos., Rehman ZU, Tayyaba F, Lee U, Kim J., Int J Mol Sci. November 1, 2022; 23 (21):                   

Alcohol induces neural tube defects by reducing retinoic acid signaling and promoting neural plate expansion., Edri T, Cohen D, Shabtai Y, Fainsod A., Front Cell Dev Biol. January 1, 2023; 11 1282273.                    

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