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Summary Expression Phenotypes Gene Literature (63) GO Terms (7) Nucleotides (270) Proteins (58) Interactants (819) Wiki
XB-GENEPAGE-485062

Papers associated with gata6



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Solubility phase transition of maternal RNAs during vertebrate oocyte-to-embryo transition., Hwang H, Chen S, Ma M, Divyanshi, Fan HC, Borwick E, Böke E, Mei W, Yang J., Dev Cell. December 4, 2023; 58 (23): 2776-2788.e5.                          

Uncovering the mesendoderm gene regulatory network through multi-omic data integration., Jansen C, Paraiso KD, Zhou JJ, Blitz IL, Fish MB, Charney RM, Cho JS, Yasuoka Y, Sudou N, Bright AR, Wlizla M, Veenstra GJC, Taira M, Zorn AM, Mortazavi A, Cho KWY., Cell Rep. February 15, 2022; 38 (7): 110364.                            

The DNA-to-cytoplasm ratio broadly activates zygotic gene expression in Xenopus., Jukam D, Kapoor RR, Straight AF, Skotheim JM., Curr Biol. October 11, 2021; 31 (19): 4269-4281.e8.                          

Modeling endoderm development and disease in Xenopus., Edwards NA, Zorn AM., Curr Top Dev Biol. January 1, 2021; 145 61-90.

Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation., Paraiso KD, Blitz IL, Coley M, Cheung J, Sudou N, Taira M, Cho KWY., Cell Rep. June 4, 2019; 27 (10): 2962-2977.e5.                          

The Wnt inhibitor Dkk1 is required for maintaining the normal cardiac differentiation program in Xenopus laevis., Guo Y, Dorn T, Kühl SJ, Linnemann A, Rothe M, Pfister AS, Vainio S, Laugwitz KL, Moretti A, Kühl M., Dev Biol. May 1, 2019; 449 (1): 1-13.                                  

Increasing complexity: Mechanical guidance and feedback loops as a basis for self-organization in morphogenesis., Bredov D, Volodyaev I., Biosystems. November 1, 2018; 173 133-156.

Serine Threonine Kinase Receptor-Associated Protein Deficiency Impairs Mouse Embryonic Stem Cells Lineage Commitment Through CYP26A1-Mediated Retinoic Acid Homeostasis., Jin L, Chang C, Pawlik KM, Datta A, Johnson LM, Vu T, Napoli JL, Datta PK., Stem Cells. September 1, 2018; 36 (9): 1368-1379.                      

Genome-wide transcriptomics analysis identifies sox7 and sox18 as specifically regulated by gata4 in cardiomyogenesis., Afouda BA, Lynch AT, de Paiva Alves E, Hoppler S., Dev Biol. February 1, 2018; 434 (1): 108-120.                  

Genome-wide transcriptomics analysis of genes regulated by GATA4, 5 and 6 during cardiomyogenesis in Xenopus laevis., Afouda BA, Lynch AT, de Paiva Alves E, Hoppler S., Data Brief. January 17, 2018; 17 559-563.  

Frizzled-7 is required for Xenopus heart development., Abu-Elmagd M, Mulvaney J, Wheeler GN., Biol Open. December 15, 2017; 6 (12): 1861-1868.            

Genome-wide identification of thyroid hormone receptor targets in the remodeling intestine during Xenopus tropicalis metamorphosis., Fu L, Das B, Matsuura K, Fujimoto K, Heimeier RA, Shi YB, Shi YB., Sci Rep. July 25, 2017; 7 (1): 6414.            

H3K4 Methylation-Dependent Memory of Somatic Cell Identity Inhibits Reprogramming and Development of Nuclear Transfer Embryos., Hörmanseder E, Simeone A, Allen GE, Bradshaw CR, Figlmüller M, Gurdon J, Jullien J., Cell Stem Cell. July 6, 2017; 21 (1): 135-143.e6.          

A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM, Paraiso KD, Blitz IL, Cho KWY., Semin Cell Dev Biol. June 1, 2017; 66 12-24.    

A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification., Rankin SA, Rankin SA, Han L, McCracken KW, Kenny AP, Anglin CT, Grigg EA, Crawford CM, Wells JM, Shannon JM, Zorn AM., Cell Rep. June 28, 2016; 16 (1): 66-78.                                              

Early ketamine exposure results in cardiac enlargement and heart dysfunction in Xenopus embryos., Guo R, Liu G, Du M, Shi Y, Shi Y, Jiang P, Liu X, Liu L, Liu J, Xu Y, Xu Y., BMC Anesthesiol. April 18, 2016; 16 23.              

Xenopus as a model system for studying pancreatic development and diabetes., Kofent J, Spagnoli FM., Semin Cell Dev Biol. March 1, 2016; 51 106-16.  

Predicting Variabilities in Cardiac Gene Expression with a Boolean Network Incorporating Uncertainty., Grieb M, Burkovski A, Sträng JE, Kraus JM, Groß A, Palm G, Kühl M, Kestler HA., PLoS One. July 16, 2015; 10 (7): e0131832.        

At new heights - endodermal lineages in development and disease., Ober EA, Grapin-Botton A., Development. June 1, 2015; 142 (11): 1912-1917.  

E2a is necessary for Smad2/3-dependent transcription and the direct repression of lefty during gastrulation., Wills AE, Baker JC., Dev Cell. February 9, 2015; 32 (3): 345-57.                  

The alternative splicing regulator Tra2b is required for somitogenesis and regulates splicing of an inhibitory Wnt11b isoform., Dichmann DS, Walentek P, Harland RM., Cell Rep. February 3, 2015; 10 (4): 527-36.                    

Genome-wide view of TGFβ/Foxh1 regulation of the early mesendoderm program., Chiu WT, Charney Le R, Blitz IL, Fish MB, Li Y, Biesinger J, Xie X, Cho KW., Development. December 1, 2014; 141 (23): 4537-47.                                  

Gene regulatory networks governing lung specification., Rankin SA, Rankin SA, Zorn AM., J Cell Biochem. August 1, 2014; 115 (8): 1343-50.

Comparative analysis reveals distinct and overlapping functions of Mef2c and Mef2d during cardiogenesis in Xenopus laevis., Guo Y, Kühl SJ, Pfister AS, Cizelsky W, Denk S, Beer-Molz L, Kühl M., PLoS One. January 17, 2014; 9 (1): e87294.                

Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns., Zheng Z, Christley S, Chiu WT, Blitz IL, Xie X, Cho KW, Nie Q., BMC Syst Biol. January 8, 2014; 8 3.                  

Atypical protein kinase C couples cell sorting with primitive endoderm maturation in the mouse blastocyst., Saiz N, Grabarek JB, Sabherwal N, Papalopulu N, Plusa B., Development. November 1, 2013; 140 (21): 4311-22.              

sfrp1 promotes cardiomyocyte differentiation in Xenopus via negative-feedback regulation of Wnt signalling., Gibb N, Lavery DL, Hoppler S., Development. April 1, 2013; 140 (7): 1537-49.                                    

Two novel GATA6 mutations cause childhood-onset diabetes mellitus, pancreas malformation and congenital heart disease., Gong M, Simaite D, Kühnen P, Heldmann M, Spagnoli F, Blankenstein O, Hübner N, Hussain K, Raile K., Horm Res Paediatr. January 1, 2013; 79 (4): 250-6.

Inhibition of heart formation by lithium is an indirect result of the disruption of tissue organization within the embryo., Martin LK, Bratoeva M, Mezentseva NV, Bernanke JM, Remond MC, Ramsdell AF, Eisenberg CA, Eisenberg LM., Dev Growth Differ. February 1, 2012; 54 (2): 153-66.                

Different requirements for GATA factors in cardiogenesis are mediated by non-canonical Wnt signaling., Afouda BA, Hoppler S., Dev Dyn. March 1, 2011; 240 (3): 649-62.  

Identification and characterization of alternative promoters of zebrafish Rtn-4/Nogo genes in cultured cells and zebrafish embryos., Chen YC, Wu BK, Chu CY, Cheng CH, Han HW, Chen GD, Lee MT, Hwang PP, Kawakami K, Chang CC, Huang CJ., Nucleic Acids Res. August 1, 2010; 38 (14): 4635-50.              

Wnt/beta-catenin signalling regulates cardiomyogenesis via GATA transcription factors., Martin J, Afouda BA, Hoppler S., J Anat. January 1, 2010; 216 (1): 92-107.

Comparative gene expression analysis and fate mapping studies suggest an early segregation of cardiogenic lineages in Xenopus laevis., Gessert S, Kühl M., Dev Biol. October 15, 2009; 334 (2): 395-408.          

In vitro organogenesis from undifferentiated cells in Xenopus., Asashima M, Ito Y, Chan T, Michiue T, Nakanishi M, Suzuki K, Hitachi K, Okabayashi K, Kondow A, Ariizumi T., Dev Dyn. June 1, 2009; 238 (6): 1309-20.                      

Wnt6 signaling regulates heart muscle development during organogenesis., Lavery DL, Martin J, Turnbull YD, Hoppler S., Dev Biol. November 15, 2008; 323 (2): 177-88.            

Induction and modulation of smooth muscle differentiation in Xenopus embryonic cells., Barillot W, Tréguer K, Faucheux C, Fédou S, Thézé N, Thiébaud P., Dev Dyn. November 1, 2008; 237 (11): 3373-86.  

GATA transcription factors integrate Wnt signalling during heart development., Afouda BA, Martin J, Liu F, Ciau-Uitz A, Patient R, Hoppler S., Development. October 1, 2008; 135 (19): 3185-90.        

GATA4 and GATA5 are essential for heart and liver development in Xenopus embryos., Haworth KE, Kotecha S, Mohun TJ, Latinkic BV., BMC Dev Biol. July 28, 2008; 8 74.                        

Vertebrate CASTOR is required for differentiation of cardiac precursor cells at the ventral midline., Christine KS, Conlon FL., Dev Cell. April 1, 2008; 14 (4): 616-23.                                

The Gata5 target, TGIF2, defines the pancreatic region by modulating BMP signals within the endoderm., Spagnoli FM, Brivanlou AH., Development. February 1, 2008; 135 (3): 451-61.                                                    

Redundancy and evolution of GATA factor requirements in development of the myocardium., Peterkin T, Gibson A, Patient R., Dev Biol. November 15, 2007; 311 (2): 623-35.          

Xenopus cDNA microarray identification of genes with endodermal organ expression., Park EC, Hayata T, Cho KW, Han JK., Dev Dyn. June 1, 2007; 236 (6): 1633-49.                    

Evolution of axis specification mechanisms in jawed vertebrates: insights from a chondrichthyan., Coolen M, Sauka-Spengler T, Nicolle D, Le-Mentec C, Lallemand Y, Da Silva C, Plouhinec JL, Robert B, Wincker P, Shi DL, Mazan S., PLoS One. April 18, 2007; 2 (4): e374.              

A role for GATA factors in Xenopus gastrulation movements., Fletcher G, Jones GE, Patient R, Snape A., Mech Dev. October 1, 2006; 123 (10): 730-45.    

Global analysis of the transcriptional network controlling Xenopus endoderm formation., Sinner D, Kirilenko P, Rankin S, Rankin S, Wei E, Howard L, Kofron M, Heasman J, Woodland HR, Zorn AM., Development. May 1, 2006; 133 (10): 1955-66.              

Wnt5 signaling in vertebrate pancreas development., Kim HJ, Schleiffarth JR, Jessurun J, Sumanas S, Petryk A, Lin S, Ekker SC., BMC Biol. October 24, 2005; 3 23.                    

GATA4, 5 and 6 mediate TGFbeta maintenance of endodermal gene expression in Xenopus embryos., Afouda BA, Ciau-Uitz A, Patient R., Development. February 1, 2005; 132 (4): 763-74.          

Sox17 and beta-catenin cooperate to regulate the transcription of endodermal genes., Sinner D, Rankin S, Rankin S, Lee M, Zorn AM., Development. July 1, 2004; 131 (13): 3069-80.                      

GATA-6 maintains BMP-4 and Nkx2 expression during cardiomyocyte precursor maturation., Peterkin T, Gibson A, Patient R., EMBO J. August 15, 2003; 22 (16): 4260-73.

Induction of cardiomyocytes by GATA4 in Xenopus ectodermal explants., Latinkić BV, Kotecha S, Mohun TJ., Development. August 1, 2003; 130 (16): 3865-76.              

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