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Summary Expression Phenotypes Gene Literature (88) GO Terms (6) Nucleotides (147) Proteins (57) Interactants (596) Wiki
XB-GENEPAGE-485897

Papers associated with mix1



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Regulation of gene expression downstream of a novel Fgf/Erk pathway during Xenopus development., Cowell LM, King M, West H, Broadsmith M, Genever P, Pownall ME, Isaacs HV., PLoS One. January 1, 2023; 18 (10): e0286040.                                  

Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E, Kostiuk V, Zhu J, Cecilia Guerra M, Tyan L, Hwang W, Camacho-Aguilar E, Caplan MJ, Zenisek D, Warmflash A, Owens NDL, Khokha MK., Nat Commun. November 5, 2022; 13 (1): 6681.                                            

Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions., Johnson K, Freedman S, Braun R, LaBonne C., BMC Genomics. October 23, 2022; 23 (1): 723.                                  

HMCES modulates the transcriptional regulation of nodal/activin and BMP signaling in mESCs., Liang T, Bai J, Zhou W, Lin H, Ma S, Zhu X, Tao Q, Xi Q., Cell Rep. July 12, 2022; 40 (2): 111038.                              

Temporal transcriptomic profiling reveals dynamic changes in gene expression of Xenopus animal cap upon activin treatment., Satou-Kobayashi Y, Kim JD, Fukamizu A, Asashima M., Sci Rep. July 15, 2021; 11 (1): 14537.          

Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR, van Genesen S, Li Q, Grasso A, Frölich S, van der Sande M, van Heeringen SJ, Veenstra GJC., EMBO J. May 3, 2021; 40 (9): e104913.                        

Segregation of brain and organizer precursors is differentially regulated by Nodal signaling at blastula stage., Castro Colabianchi AM, Tavella MB, Boyadjián López LE, Rubinstein M, Franchini LF, López SL., Biol Open. February 25, 2021; 10 (2):                 

Dusp1 modulates activin/smad2 mediated germ layer specification via FGF signal inhibition in Xenopus embryos., Umair Z, Kumar S, Rafiq K, Kumar V, Reman ZU, Lee SH, Kim S, Lee JY, Lee U, Kim J., Anim Cells Syst (Seoul). November 27, 2020; 24 (6): 359-370.            

Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network., Mukherjee S, Chaturvedi P, Rankin SA, Rankin SA, Fish MB, Wlizla M, Paraiso KD, MacDonald M, Chen X, Weirauch MT, Blitz IL, Cho KW, Zorn AM., Elife. September 7, 2020; 9                           

Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation., Paraiso KD, Blitz IL, Coley M, Cheung J, Sudou N, Taira M, Cho KWY., Cell Rep. June 4, 2019; 27 (10): 2962-2977.e5.                          

A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo., Blitz IL, Paraiso KD, Patrushev I, Chiu WTY, Cho KWY, Gilchrist MJ., Dev Biol. June 15, 2017; 426 (2): 409-417.        

Identification and comparative analyses of Siamois cluster genes in Xenopus laevis and tropicalis., Haramoto Y, Saijyo T, Tanaka T, Furuno N, Suzuki A, Ito Y, Kondo M, Taira M, Takahashi S., Dev Biol. June 15, 2017; 426 (2): 374-383.                  

Conservatism and variability of gene expression profiles among homeologous transcription factors in Xenopus laevis., Watanabe M, Yasuoka Y, Mawaribuchi S, Kuretani A, Ito M, Kondo M, Ochi H, Ogino H, Fukui A, Taira M, Kinoshita T., Dev Biol. June 15, 2017; 426 (2): 301-324.                          

A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM, Paraiso KD, Blitz IL, Cho KWY., Semin Cell Dev Biol. June 1, 2017; 66 12-24.    

Transcription factors Mix1 and VegT, relocalization of vegt mRNA, and conserved endoderm and dorsal specification in frogs., Sudou N, Garcés-Vásconez A, López-Latorre MA, Taira M, Del Pino EM., Proc Natl Acad Sci U S A. May 17, 2016; 113 (20): 5628-33.                      

Genome-wide view of TGFβ/Foxh1 regulation of the early mesendoderm program., Chiu WT, Charney Le R, Blitz IL, Fish MB, Li Y, Biesinger J, Xie X, Cho KW., Development. December 1, 2014; 141 (23): 4537-47.                                  

Gtpbp2 is required for BMP signaling and mesoderm patterning in Xenopus embryos., Kirmizitas A, Gillis WQ, Zhu H, Thomsen GH., Dev Biol. August 15, 2014; 392 (2): 358-67.                                

High-resolution analysis of gene activity during the Xenopus mid-blastula transition., Collart C, Owens ND, Bhaw-Rosun L, Cooper B, De Domenico E, Patrushev I, Sesay AK, Smith JN, Smith JC, Gilchrist MJ., Development. May 1, 2014; 141 (9): 1927-39.                  

Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns., Zheng Z, Christley S, Chiu WT, Blitz IL, Xie X, Cho KW, Nie Q., BMC Syst Biol. January 8, 2014; 8 3.                  

The Xenopus Tgfbi is required for embryogenesis through regulation of canonical Wnt signalling., Wang F, Hu W, Xian J, Ohnuma S, Brenton JD., Dev Biol. July 1, 2013; 379 (1): 16-27.                            

Optimal histone H3 to linker histone H1 chromatin ratio is vital for mesodermal competence in Xenopus., Lim CY, Reversade B, Knowles BB, Solter D., Development. February 1, 2013; 140 (4): 853-60.                                              

Klf4 is required for germ-layer differentiation and body axis patterning during Xenopus embryogenesis., Cao Q, Zhang X, Lu L, Yang L, Gao J, Gao Y, Ma H, Cao Y., Development. November 1, 2012; 139 (21): 3950-61.                  

Signaling crosstalk between TGFβ and Dishevelled/Par1b., Mamidi A, Inui M, Manfrin A, Soligo S, Enzo E, Aragona M, Cordenonsi M, Wessely O, Dupont S, Piccolo S., Cell Death Differ. October 1, 2012; 19 (10): 1689-97.                    

Conservation and evolutionary divergence in the activity of receptor-regulated smads., Sorrentino GM, Gillis WQ, Oomen-Hajagos J, Thomsen GH., Evodevo. October 1, 2012; 3 (1): 22.              

Self-regulation of the head-inducing properties of the Spemann organizer., Inui M, Montagner M, Ben-Zvi D, Martello G, Soligo S, Manfrin A, Aragona M, Enzo E, Zacchigna L, Zanconato F, Azzolin L, Dupont S, Cordenonsi M, Piccolo S., Proc Natl Acad Sci U S A. September 18, 2012; 109 (38): 15354-9.                            

The Mix family of homeobox genes--key regulators of mesendoderm formation during vertebrate development., Pereira LA, Wong MS, Mei Lim S, Stanley EG, Elefanty AG., Dev Biol. July 15, 2012; 367 (2): 163-77.        

A developmental requirement for HIRA-dependent H3.3 deposition revealed at gastrulation in Xenopus., Szenker E, Lacoste N, Almouzni G., Cell Rep. June 28, 2012; 1 (6): 730-40.                                      

Dynamic in vivo binding of transcription factors to cis-regulatory modules of cer and gsc in the stepwise formation of the Spemann-Mangold organizer., Sudou N, Yamamoto S, Ogino H, Taira M., Development. May 1, 2012; 139 (9): 1651-61.                  

KDEL tagging: a method for generating dominant-negative inhibitors of the secretion of TGF-beta superfamily proteins., Matsukawa S, Moriyama Y, Hayata T, Sasaki H, Ito Y, Asashima M, Kuroda H., Int J Dev Biol. January 1, 2012; 56 (5): 351-6.        

A gene regulatory network controlling hhex transcription in the anterior endoderm of the organizer., Rankin SA, Rankin SA, Kormish J, Kofron M, Jegga A, Zorn AM., Dev Biol. March 15, 2011; 351 (2): 297-310.                            

Identification of a novel negative regulator of activin/nodal signaling in mesendodermal formation of Xenopus embryos., Cheong SM, Kim H, Han JK., J Biol Chem. June 19, 2009; 284 (25): 17052-60.                        

Oct25 represses transcription of nodal/activin target genes by interaction with signal transducers during Xenopus gastrulation., Cao Y, Siegel D, Oswald F, Knöchel W., J Biol Chem. December 5, 2008; 283 (49): 34168-77.                

Mix.1/2-dependent control of FGF availability during gastrulation is essential for pronephros development in Xenopus., Colas A, Cartry J, Buisson I, Umbhauer M, Smith JC, Riou JF., Dev Biol. August 15, 2008; 320 (2): 351-65.                  

Control of gastrula cell motility by the Goosecoid/Mix.1/ Siamois network: basic patterns and paradoxical effects., Luu O, Nagel M, Wacker S, Lemaire P, Winklbauer R., Dev Dyn. May 1, 2008; 237 (5): 1307-20.

Sumoylation differentially regulates Goosecoid-mediated transcriptional repression., Izzi L, Narimatsu M, Attisano L., Exp Cell Res. April 15, 2008; 314 (7): 1585-94.

Expression of Siamois and Twin in the blastula Chordin/Noggin signaling center is required for brain formation in Xenopus laevis embryos., Ishibashi H, Matsumura N, Hanafusa H, Matsumoto K, De Robertis EM, Kuroda H., Mech Dev. January 1, 2008; 125 (1-2): 58-66.              

Mouse homologues of Shisa antagonistic to Wnt and Fgf signalings., Furushima K, Yamamoto A, Nagano T, Shibata M, Miyachi H, Abe T, Ohshima N, Kiyonari H, Aizawa S., Dev Biol. June 15, 2007; 306 (2): 480-92.  

Negative regulation of Activin/Nodal signaling by SRF during Xenopus gastrulation., Yun CH, Choi SC, Park E, Kim SJ, Chung AS, Lee HK, Lee HK, Lee HJ, Lee HJ, Han JK., Development. February 1, 2007; 134 (4): 769-77.              

Xenopus glucose transporter 1 (xGLUT1) is required for gastrulation movement in Xenopus laevis., Suzawa K, Yukita A, Hayata T, Goto T, Danno H, Michiue T, Cho KW, Asashima M., Int J Dev Biol. January 1, 2007; 51 (3): 183-90.              

Xenopus Dab2 is required for embryonic angiogenesis., Cheong SM, Choi SC, Han JK., BMC Dev Biol. December 19, 2006; 6 63.                  

Amino terminal tyrosine phosphorylation of human MIXL1., Guo W, Nagarajan L., J Mol Signal. December 5, 2006; 1 6.          

Enforced expression of the homeobox gene Mixl1 impairs hematopoietic differentiation and results in acute myeloid leukemia., Glaser S, Metcalf D, Wu L, Hart AH, DiRago L, Mifsud S, D'Amico A, Dagger S, Campo C, Chan AC, Izon DJ, Robb L., Proc Natl Acad Sci U S A. October 31, 2006; 103 (44): 16460-5.

A role for GATA factors in Xenopus gastrulation movements., Fletcher G, Jones GE, Patient R, Snape A., Mech Dev. October 1, 2006; 123 (10): 730-45.    

Global analysis of the transcriptional network controlling Xenopus endoderm formation., Sinner D, Kirilenko P, Rankin S, Rankin S, Wei E, Howard L, Kofron M, Heasman J, Woodland HR, Zorn AM., Development. May 1, 2006; 133 (10): 1955-66.              

Determination of the minimal domains of Mix.3/Mixer required for endoderm development., Doherty JR, Zhu H, Kuliyev E, Mead PE., Mech Dev. January 1, 2006; 123 (1): 56-66.                  

Germ-layer specification and control of cell growth by Ectodermin, a Smad4 ubiquitin ligase., Dupont S, Zacchigna L, Cordenonsi M, Soligo S, Adorno M, Rugge M, Piccolo S., Cell. April 8, 2005; 121 (1): 87-99.                                  

The ARID domain protein dril1 is necessary for TGF(beta) signaling in Xenopus embryos., Callery EM, Smith JC, Thomsen GH., Dev Biol. February 15, 2005; 278 (2): 542-59.                              

Shisa promotes head formation through the inhibition of receptor protein maturation for the caudalizing factors, Wnt and FGF., Yamamoto A, Nagano T, Takehara S, Hibi M, Aizawa S., Cell. January 28, 2005; 120 (2): 223-35.                      

Patterning and tissue movements in a novel explant preparation of the marginal zone of Xenopus laevis., Davidson LA, Keller R, DeSimone D., Gene Expr Patterns. July 1, 2004; 4 (4): 457-66.        

Selective degradation of excess Ldb1 by Rnf12/RLIM confers proper Ldb1 expression levels and Xlim-1/Ldb1 stoichiometry in Xenopus organizer functions., Hiratani I, Yamamoto N, Mochizuki T, Ohmori SY, Taira M., Development. September 1, 2003; 130 (17): 4161-75.                    

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