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Summary Expression Phenotypes Gene Literature (69) GO Terms (46) Nucleotides (158) Proteins (47) Interactants (941) Wiki
XB-GENEPAGE-487308

Papers associated with gdf3



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Regulation of gene expression downstream of a novel Fgf/Erk pathway during Xenopus development., Cowell LM, King M, West H, Broadsmith M, Genever P, Pownall ME, Isaacs HV., PLoS One. January 1, 2023; 18 (10): e0286040.   


Evolutionary conservation of maternal RNA localization in fishes and amphibians revealed by TOMO-Seq., Naraine R, Iegorova V, Abaffy P, Franek R, Soukup V, Psenicka M, Sindelka R., Dev Biol. September 1, 2022; 489 146-160.   


Identification of SCN5a p.C335R Variant in a Large Family with Dilated Cardiomyopathy and Conduction Disease., Sedaghat-Hamedani F, Rebs S, El-Battrawy I, Chasan S, Krause T, Haas J, Zhong R, Liao Z, Xu Q, Zhou X, Akin I, Zitron E, Frey N, Streckfuss-Bömeke K, Kayvanpour E., Int J Mol Sci. November 30, 2021; 22 (23):   


Bicc1 and Dicer regulate left-right patterning through post-transcriptional control of the Nodal inhibitor Dand5., Maerker M, Getwan M, Dowdle ME, McSheene JC, Gonzalez V, Pelliccia JL, Hamilton DS, Yartseva V, Vejnar C, Tingler M, Minegishi K, Vick P, Giraldez AJ, Hamada H, Burdine RD, Sheets MD, Blum M, Schweickert A., Nat Commun. September 16, 2021; 12 (1): 5482.   


Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network., Mukherjee S, Chaturvedi P, Rankin SA, Rankin SA, Fish MB, Wlizla M, Paraiso KD, MacDonald M, Chen X, Weirauch MT, Blitz IL, Cho KW, Zorn AM., Elife. September 7, 2020; 9   


The Actin-Family Protein Arp4 Is a Novel Suppressor for the Formation and Functions of Nuclear F-Actin., Yamazaki S, Gerhold C, Yamamoto K, Ueno Y, Grosse R, Miyamoto K, Harata M., Cells. March 19, 2020; 9 (3):   


Alkylglycerol monooxygenase, a heterotaxy candidate gene, regulates left-right patterning via Wnt signaling., Duncan AR, González DP, Del Viso F, Robson A, Khokha MK, Griffin JN., Dev Biol. December 1, 2019; 456 (1): 1-7.   


Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation., Paraiso KD, Blitz IL, Coley M, Cheung J, Sudou N, Taira M, Cho KWY., Cell Rep. June 4, 2019; 27 (10): 2962-2977.e5.   


Znf703 is a novel RA target in the neural plate border., Janesick A, Tang W, Ampig K, Blumberg B., Sci Rep. June 4, 2019; 9 (1): 8275.

Transcriptome profiling reveals male- and female-specific gene expression pattern and novel gene candidates for the control of sex determination and gonad development in Xenopus laevis., Piprek RP, Damulewicz M, Tassan JP, Kloc M, Kubiak JZ., Dev Genes Evol. May 1, 2019; 229 (2-3): 53-72.   


RARγ is required for mesodermal gene expression prior to gastrulation in Xenopus., Janesick A, Tang W, Shioda T, Blumberg B., Development. September 17, 2018; 145 (18):   


Tbx2 is required for the suppression of mesendoderm during early Xenopus development., Teegala S, Chauhan R, Lei E, Weinstein DC., Dev Dyn. July 1, 2018; 247 (7): 903-913.   


Innate Immune Response and Off-Target Mis-splicing Are Common Morpholino-Induced Side Effects in Xenopus., Gentsch GE, Spruce T, Monteiro RS, Owens NDL, Martin SR, Smith JC., Dev Cell. March 12, 2018; 44 (5): 597-610.e10.   


A Conserved Role of the Unconventional Myosin 1d in Laterality Determination., Tingler M, Kurz S, Maerker M, Ott T, Fuhl F, Schweickert A, LeBlanc-Straceski JM, Noselli S, Blum M., Curr Biol. March 5, 2018; 28 (5): 810-816.e3.   


RAPGEF5 Regulates Nuclear Translocation of β-Catenin., Griffin JN, Del Viso F, Duncan AR, Robson A, Hwang W, Kulkarni S, Liu KJ, Liu KJ, Khokha MK., Dev Cell. January 22, 2018; 44 (2): 248-260.e4.   


Candidate Heterotaxy Gene FGFR4 Is Essential for Patterning of the Left-Right Organizer in Xenopus., Sempou E, Lakhani OA, Amalraj S, Khokha MK., Front Physiol. January 1, 2018; 9 1705.   


Maternal Gdf3 is an obligatory cofactor in Nodal signaling for embryonic axis formation in zebrafish., Bisgrove BW, Su YC, Yost HJ., Elife. November 15, 2017; 6   


A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates., Plouhinec JL, Medina-Ruiz S, Borday C, Bernard E, Vert JP, Eisen MB, Harland RM, Monsoro-Burq AH., PLoS Biol. October 19, 2017; 15 (10): e2004045.   


Genome organization of the vg1 and nodal3 gene clusters in the allotetraploid frog Xenopus laevis., Suzuki A, Uno Y, Takahashi S, Grimwood J, Schmutz J, Mawaribuchi S, Yoshida H, Takebayashi-Suzuki K, Ito M, Matsuda Y, Rokhsar D, Taira M., Dev Biol. June 15, 2017; 426 (2): 236-244.   


A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM, Paraiso KD, Blitz IL, Cho KWY., Semin Cell Dev Biol. June 1, 2017; 66 12-24.   


Ascl1 represses the mesendoderm induction in Xenopus., Min Z, Lin H, Zhu X, Gao L, Khand AA, Tao Q., Acta Biochim Biophys Sin (Shanghai). November 1, 2016; 48 (11): 1006-1015.

Genome evolution in the allotetraploid frog Xenopus laevis., Session AM, Uno Y, Kwon T, Chapman JA, Toyoda A, Takahashi S, Fukui A, Hikosaka A, Suzuki A, Kondo M, van Heeringen SJ, Quigley I, Heinz S, Ogino H, Ochi H, Hellsten U, Lyons JB, Simakov O, Putnam N, Stites J, Kuroki Y, Tanaka T, Michiue T, Watanabe M, Bogdanovic O, Lister R, Georgiou G, Paranjpe SS, van Kruijsbergen I, Shu S, Carlson J, Kinoshita T, Ohta Y, Mawaribuchi S, Jenkins J, Grimwood J, Schmutz J, Mitros T, Mozaffari SV, Suzuki Y, Haramoto Y, Yamamoto TS, Takagi C, Heald R, Miller K, Haudenschild C, Kitzman J, Nakayama T, Izutsu Y, Robert J, Fortriede J, Burns K, Lotay V, Karimi K, Yasuoka Y, Dichmann DS, Flajnik MF, Houston DW, Shendure J, DuPasquier L, Vize PD, Zorn AM, Ito M, Marcotte EM, Wallingford JB, Ito Y, Asashima M, Ueno N, Matsuda Y, Veenstra GJ, Fujiyama A, Harland RM, Taira M, Rokhsar DS., Nature. October 20, 2016; 538 (7625): 336-343.   


FoxH1 mediates a Grg4 and Smad2 dependent transcriptional switch in Nodal signaling during Xenopus mesoderm development., Reid CD, Steiner AB, Yaklichkin S, Lu Q, Wang S, Hennessy M, Kessler DS., Dev Biol. June 1, 2016; 414 (1): 34-44.   


Global analysis of asymmetric RNA enrichment in oocytes reveals low conservation between closely related Xenopus species., Claußen M, Lingner T, Pommerenke C, Opitz L, Salinas G, Pieler T., Mol Biol Cell. November 5, 2015; .   


TGF-β Signaling Regulates the Differentiation of Motile Cilia., Tözser J, Earwood R, Kato A, Brown J, Tanaka K, Didier R, Megraw TL, Blum M, Kato Y., Cell Rep. May 19, 2015; 11 (7): 1000-7.   


Intracellular microRNA profiles form in the Xenopus laevis oocyte that may contribute to asymmetric cell division., Sidova M, Sindelka R, Castoldi M, Benes V, Kubista M., Sci Rep. January 12, 2015; 5 11157.   


Active repression by RARγ signaling is required for vertebrate axial elongation., Janesick A, Nguyen TT, Aisaki K, Igarashi K, Kitajima S, Chandraratna RA, Kanno J, Blumberg B., Development. June 1, 2014; 141 (11): 2260-70.   


High-resolution analysis of gene activity during the Xenopus mid-blastula transition., Collart C, Owens ND, Bhaw-Rosun L, Cooper B, De Domenico E, Patrushev I, Sesay AK, Smith JN, Smith JC, Gilchrist MJ., Development. May 1, 2014; 141 (9): 1927-39.   


Characterization of the nutritional endoderm in the direct developing frog Eleutherodactylus coqui., Karadge U, Elinson RP., Dev Genes Evol. November 1, 2013; 223 (6): 351-62.

In vivo T-box transcription factor profiling reveals joint regulation of embryonic neuromesodermal bipotency., Gentsch GE, Owens ND, Martin SR, Piccinelli P, Faial T, Trotter MW, Gilchrist MJ, Smith JC., Cell Rep. September 26, 2013; 4 (6): 1185-96.   


A developmental requirement for HIRA-dependent H3.3 deposition revealed at gastrulation in Xenopus., Szenker E, Lacoste N, Almouzni G., Cell Rep. June 28, 2012; 1 (6): 730-40.   


Toward an unbiased evolutionary platform for unraveling Xenopus developmental gene networks., Beer R, Wagner F, Grishkevich V, Peshkin L, Yanai I., Genesis. March 1, 2012; 50 (3): 186-91.   


APOBEC2, a selective inhibitor of TGFβ signaling, regulates left-right axis specification during early embryogenesis., Vonica A, Rosa A, Arduini BL, Brivanlou AH., Dev Biol. February 1, 2011; 350 (1): 13-23.   


Transdifferentiation from cornea to lens in Xenopus laevis depends on BMP signalling and involves upregulation of Wnt signalling., Day RC, Beck CW., BMC Dev Biol. January 26, 2011; 11 54.   


Microarray identification of novel downstream targets of FoxD4L1/D5, a critical component of the neural ectodermal transcriptional network., Yan B, Neilson KM, Moody SA., Dev Dyn. December 1, 2010; 239 (12): 3467-80.   


GDF3 is a BMP inhibitor that can activate Nodal signaling only at very high doses., Levine AJ, Levine ZJ, Brivanlou AH., Dev Biol. January 1, 2009; 325 (1): 43-8.   


Bmp signaling is necessary and sufficient for ventrolateral endoderm specification in Xenopus., Wills A, Dickinson K, Khokha M, Baker JC., Dev Dyn. August 1, 2008; 237 (8): 2177-86.   


Long-range action of Nodal requires interaction with GDF1., Tanaka C, Sakuma R, Nakamura T, Hamada H, Saijoh Y., Genes Dev. December 15, 2007; 21 (24): 3272-82.   


Distinct and cooperative roles of mammalian Vg1 homologs GDF1 and GDF3 during early embryonic development., Andersson O, Bertolino P, Ibáñez CF., Dev Biol. November 15, 2007; 311 (2): 500-11.

Vg1 has specific processing requirements that restrict its action to body axis patterning centers., Thomas JT, Moos M., Dev Biol. October 1, 2007; 310 (1): 129-39.   


The competence of Xenopus blastomeres to produce neural and retinal progeny is repressed by two endo-mesoderm promoting pathways., Yan B, Moody SA., Dev Biol. May 1, 2007; 305 (1): 103-19.   


The left-right axis is regulated by the interplay of Coco, Xnr1 and derrière in Xenopus embryos., Vonica A, Brivanlou AH., Dev Biol. March 1, 2007; 303 (1): 281-94.   


FoxD3 regulation of Nodal in the Spemann organizer is essential for Xenopus dorsal mesoderm development., Steiner AB, Engleka MJ, Lu Q, Piwarzyk EC, Yaklichkin S, Lefebvre JL, Walters JW, Pineda-Salgado L, Labosky PA, Kessler DS., Development. December 1, 2006; 133 (24): 4827-38.   


Hex acts with beta-catenin to regulate anteroposterior patterning via a Groucho-related co-repressor and Nodal., Zamparini AL, Watts T, Gardner CE, Tomlinson SR, Johnston GI, Brickman JM., Development. September 1, 2006; 133 (18): 3709-22.   


The Vg1-related protein Gdf3 acts in a Nodal signaling pathway in the pre-gastrulation mouse embryo., Chen C, Ware SM, Sato A, Houston-Hawkins DE, Habas R, Matzuk MM, Shen MM, Brown CW., Development. January 1, 2006; 133 (2): 319-29.   


GDF3, a BMP inhibitor, regulates cell fate in stem cells and early embryos., Levine AJ, Brivanlou AH., Development. January 1, 2006; 133 (2): 209-16.   


Microarray-based identification of VegT targets in Xenopus., Taverner NV, Kofron M, Kofron M, Shin Y, Kabitschke C, Gilchrist MJ, Wylie C, Cho KW, Heasman J, Smith JC., Mech Dev. March 1, 2005; 122 (3): 333-54.   


Multiple retropseudogenes from pluripotent cell-specific gene expression indicates a potential signature for novel gene identification., Pain D, Chirn GW, Strassel C, Kemp DM., J Biol Chem. February 25, 2005; 280 (8): 6265-8.

XPACE4 is a localized pro-protein convertase required for mesoderm induction and the cleavage of specific TGFbeta proteins in Xenopus development., Birsoy B, Berg L, Williams PH, Smith JC, Wylie CC, Christian JL, Heasman J., Development. February 1, 2005; 132 (3): 591-602.   


Global analysis of RAR-responsive genes in the Xenopus neurula using cDNA microarrays., Arima K, Shiotsugu J, Niu R, Khandpur R, Martinez M, Shin Y, Koide T, Cho KW, Kitayama A, Ueno N, Chandraratna RA, Blumberg B., Dev Dyn. February 1, 2005; 232 (2): 414-31.   

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