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Summary Expression Gene Literature (90) GO Terms (21) Nucleotides (206) Proteins (48) Interactants (316) Wiki

Papers associated with tbp

Search for tbp morpholinos using Textpresso

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2 paper(s) referencing morpholinos

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NEIL1 and NEIL2 DNA glycosylases protect neural crest development against mitochondrial oxidative stress., Han D, Schomacher L, Schüle KM, Mallick M, Musheev MU, Karaulanov E, Krebs L, von Seggern A, Niehrs C., Elife. January 1, 2019; 8                                     

Lack of GAS2L2 Causes PCD by Impairing Cilia Orientation and Mucociliary Clearance., Bustamante-Marin XM, Yin WN, Sears PR, Werner ME, Brotslaw EJ, Mitchell BJ, Jania CM, Zeman KL, Rogers TD, Herring LE, Refabért L, Thomas L, Amselem S, Escudier E, Legendre M, Grubb BR, Knowles MR, Zariwala MA, Ostrowski LE., Am J Hum Genet. January 1, 2019; 104 (2): 229-245.                                  

Pituitary cell translation and secretory capacities are enhanced cell autonomously by the transcription factor Creb3l2., Khetchoumian K, Balsalobre A, Mayran A, Christian H, Chénard V, St-Pierre J, Drouin J., Nat Commun. January 1, 2019; 10 (1): 3960.                      

Digital dissection of the model organism Xenopus laevis using contrast-enhanced computed tomography., Porro LB, Richards CT., J Anat. August 1, 2017; 231 (2): 169-191.                        

Activation of a T-box-Otx2-Gsc gene network independent of TBP and TBP-related factors., Gazdag E, Jacobi UG, van Kruijsbergen I, Weeks DL, Veenstra GJ., Development. April 15, 2016; 143 (8): 1340-50.                    

Tumor protein Tctp regulates axon development in the embryonic visual system., Roque CG, Wong HH, Lin JQ, Holt CE., Development. April 1, 2016; 143 (7): 1134-48.                                  

A phospho-dependent mechanism involving NCoR and KMT2D controls a permissive chromatin state at Notch target genes., Oswald F, Rodriguez P, Giaimo BD, Antonello ZA, Mira L, Mittler G, Thiel VN, Collins KJ, Tabaja N, Cizelsky W, Rothe M, Kühl SJ, Kühl SJ, Kühl M, Ferrante F, Hein K, Kovall RA, Dominguez M, Borggrefe T., Nucleic Acids Res. January 1, 2016; 44 (10): 4703-20.                              

Hierarchical molecular events driven by oocyte-specific factors lead to rapid and extensive reprogramming., Jullien J, Miyamoto K, Pasque V, Allen GE, Bradshaw CR, Garrett NJ, Halley-Stott RP, Kimura H, Ohsumi K, Gurdon JB., Mol Cell. August 21, 2014; 55 (4): 524-36.              

A conserved Oct4/POUV-dependent network links adhesion and migration to progenitor maintenance., Livigni A, Peradziryi H, Sharov AA, Chia G, Hammachi F, Migueles RP, Sukparangsi W, Pernagallo S, Bradley M, Nichols J, Ko MSH, Brickman JM., Curr Biol. November 18, 2013; 23 (22): 2233-2244.                                    

SUMO modification of NZFP mediates transcriptional repression through TBP binding., Kim M, Chen Z, Shim MS, Lee MS, Kim JE, Kwon YE, Yoo TJ, Kim JY, Bang JY, Carlson BA, Seol JH, Hatfield DL, Lee BJ., Mol Cells. January 1, 2013; 35 (1): 70-8.

The roles of the reprogramming factors Oct4, Sox2 and Klf4 in resetting the somatic cell epigenome during induced pluripotent stem cell generation., Schmidt R, Plath K., Genome Biol. October 22, 2012; 13 (10): 251.      

Polycomb repressive complex 1 (PRC1) disassembles RNA polymerase II preinitiation complexes., Lehmann L, Ferrari R, Vashisht AA, Wohlschlegel JA, Kurdistani SK, Carey M., J Biol Chem. October 19, 2012; 287 (43): 35784-94.

Transcriptional activation by Oct4 is sufficient for the maintenance and induction of pluripotency., Hammachi F, Morrison GM, Sharov AA, Livigni A, Narayan S, Papapetrou EP, O'Malley J, Kaji K, Ko MS, Ptashne M, Brickman JM., Cell Rep. February 23, 2012; 1 (2): 99-109.                          

Nucleotide composition-linked divergence of vertebrate core promoter architecture., van Heeringen SJ, Akhtar W, Jacobi UG, Akkers RC, Suzuki Y, Veenstra GJ., Genome Res. March 1, 2011; 21 (3): 410-21.

ChIP-chip designs to interrogate the genome of Xenopus embryos for transcription factor binding and epigenetic regulation., Akkers RC, van Heeringen SJ, Manak JR, Green RD, Stunnenberg HG, Veenstra GJ., PLoS One. January 13, 2010; 5 (1): e8820.        

TBP2 is a substitute for TBP in Xenopus oocyte transcription., Akhtar W, Veenstra GJ., BMC Biol. August 3, 2009; 7 45.              

Concentrations of TATA box-binding protein (TBP)-type genes affect chordamesodermal gene expression., Goto T, Keller R, Asashima M., Int J Dev Biol. January 1, 2008; 52 (4): 371-5.    

Initiation of zebrafish haematopoiesis by the TATA-box-binding protein-related factor Trf3., Hart DO, Raha T, Lawson ND, Green MR., Nature. December 13, 2007; 450 (7172): 1082-5.

TBP paralogs accommodate metazoan- and vertebrate-specific developmental gene regulation., Jacobi UG, Akkers RC, Pierson ES, Weeks DL, Dagle JM, Veenstra GJ., EMBO J. September 5, 2007; 26 (17): 3900-9.

Genomics, evolution, and expression of TBPL2, a member of the TBP family., Di Pietro C, Ragusa M, Duro L, Guglielmino MR, Barbagallo D, Carnemolla A, Laganà A, Buffa P, Angelica R, Rinaldi A, Calafato MS, Milicia I, Caserta C, Giugno R, Pulvirenti A, Giunta V, Rapisarda A, Di Pietro V, Grillo A, Messina A, Ferro A, Grzeschik KH, Purrello M., DNA Cell Biol. June 1, 2007; 26 (6): 369-85.

Structure and function of the histone chaperone CIA/ASF1 complexed with histones H3 and H4., Natsume R, Eitoku M, Akai Y, Sano N, Horikoshi M, Senda T., Nature. March 15, 2007; 446 (7133): 338-41.

Developmental and cell type-specific regulation of core promoter transcription factors in germ cells of frogs and mice., Xiao L, Kim M, DeJong J., Gene Expr Patterns. April 1, 2006; 6 (4): 409-19.

The architecture of mammalian ribosomal protein promoters., Perry RP., BMC Evol Biol. February 13, 2005; 5 15.            

Specialized and redundant roles of TBP and a vertebrate-specific TBP paralog in embryonic gene regulation in Xenopus., Jallow Z, Jacobi UG, Weeks DL, Dawid IB, Veenstra GJ., Proc Natl Acad Sci U S A. September 14, 2004; 101 (37): 13525-30.

A novel TBP-interacting zinc finger protein functions in early development of Xenopus laevis., Kim M, Choi J, Carlson BA, Han JK, Rhee K, Sargent T, Hatfield DL, Lee BJ., Biochem Biophys Res Commun. July 11, 2003; 306 (4): 1106-11.

A novel TBP-interacting zinc finger protein represses transcription by inhibiting the recruitment of TFIIA and TFIIB., Kim M, Park CH, Lee MS, Carlson BA, Hatfield DL, Lee BJ., Biochem Biophys Res Commun. June 20, 2003; 306 (1): 231-8.

Steady-state dynamics of Cajal body components in the Xenopus germinal vesicle., Handwerger KE, Murphy C, Gall JG., J Cell Biol. February 17, 2003; 160 (4): 495-504.                    

The rod cGMP-phosphodiesterase beta-subunit promoter is a specific target for Sp4 and is not activated by other Sp proteins or CRX., Lerner LE, Gribanova YE, Whitaker L, Knox BE, Farber DB., J Biol Chem. July 19, 2002; 277 (29): 25877-83.

Alteration of nuclear lamin organization inhibits RNA polymerase II-dependent transcription., Spann TP, Goldman AE, Wang C, Huang S, Goldman RD., J Cell Biol. February 18, 2002; 156 (4): 603-8.            

Distinct functions of TBP and TLF/TRF2 during spermatogenesis: requirement of TLF for heterochromatic chromocenter formation in haploid round spermatids., Martianov I, Brancorsini S, Gansmuller A, Parvinen M, Davidson I, Sassone-Corsi P., Development. February 1, 2002; 129 (4): 945-55.

Human papillomavirus-16 E7 protein inhibits the DNA interaction of the TATA binding transcription factor., Maldonado E, Cabrejos ME, Banks L, Allende JE., J Cell Biochem. January 1, 2002; 85 (4): 663-9.

Effects of bisphenol A and its derivatives on the response of GABA(A) receptors expressed in Xenopus oocytes., Aoshima H, Hossain SJ, Imamura H, Shingai R., Biosci Biotechnol Biochem. September 1, 2001; 65 (9): 2070-7.

The TFIID components human TAF(II)140 and Drosophila BIP2 (TAF(II)155) are novel metazoan homologues of yeast TAF(II)47 containing a histone fold and a PHD finger., Gangloff YG, Pointud JC, Thuault S, Carré L, Romier C, Muratoglu S, Brand M, Tora L, Couderc JL, Davidson I., Mol Cell Biol. August 1, 2001; 21 (15): 5109-21.

Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex., Kamada K, Shu F, Chen H, Malik S, Stelzer G, Roeder RG, Meisterernst M, Burley SK., Cell. July 13, 2001; 106 (1): 71-81.

Distinct roles for TBP and TBP-like factor in early embryonic gene transcription in Xenopus., Veenstra GJ, Weeks DL, Wolffe AP., Science. December 22, 2000; 290 (5500): 2312-5.

HEAT repeats associated with condensins, cohesins, and other complexes involved in chromosome-related functions., Neuwald AF, Hirano T., Genome Res. October 1, 2000; 10 (10): 1445-52.

Translation of maternal TATA-binding protein mRNA potentiates basal but not activated transcription in Xenopus embryos at the midblastula transition., Veenstra GJ, Destrée OH, Wolffe AP., Mol Cell Biol. December 1, 1999; 19 (12): 7972-82.

Inhibition of transcription of class II, but not class III and I, genes in Xenopus postblastular embryos overexpressed with the TBP-binding protein, Dr1 (NC2beta)., Nagano M, Shiokawa K., Biochem Biophys Res Commun. November 30, 1999; 265 (3): 644-51.

A nuclear factor, ASC-2, as a cancer-amplified transcriptional coactivator essential for ligand-dependent transactivation by nuclear receptors in vivo., Lee SK, Anzick SL, Choi JE, Bubendorf L, Guan XY, Jung YK, Kallioniemi OP, Kononen J, Trent JM, Azorsa D, Jhun BH, Cheong JH, Lee YC, Meltzer PS, Lee JW, Lee JW., J Biol Chem. November 26, 1999; 274 (48): 34283-93.

Analysis of the chicken TBP-like protein(tlp) gene: evidence for a striking conservation of vertebrate TLPs and for a close relationship between vertebrate tbp and tlp genes., Shimada M, Ohbayashi T, Ishida M, Nakadai T, Makino Y, Aoki T, Kawata T, Suzuki T, Matsuda Y, Tamura T., Nucleic Acids Res. August 1, 1999; 27 (15): 3146-52.

Developmental changes in RNA polymerase I and TATA box-binding protein during early Xenopus embryogenesis., Bell P, Scheer U., Exp Cell Res. April 10, 1999; 248 (1): 122-35.

Recruitment of TBP or TFIIB to a promoter proximal position leads to stimulation of RNA polymerase II transcription without activator proteins both in vivo and in vitro., Huh JR, Park JM, Kim M, Carlson BA, Hatfield DL, Lee BJ., Biochem Biophys Res Commun. March 5, 1999; 256 (1): 45-51.

Minor groove DNA-protein contacts upstream of a tRNA gene detected with a synthetic DNA binding ligand., McBryant SJ, Baird EE, Trauger JW, Dervan PB, Gottesfeld JM., J Mol Biol. March 5, 1999; 286 (4): 973-81.

Phosphorylation of yeast TBP by protein kinase CK2 reduces its specific binding to DNA., Maldonado E, Allende JE., FEBS Lett. January 29, 1999; 443 (3): 256-60.

Dimerization and HMG box domains 1-3 present in Xenopus UBF are sufficient for its role in transcriptional enhancement., Sullivan GJ, McStay B., Nucleic Acids Res. August 1, 1998; 26 (15): 3555-61.

Repression of TFIIH transcriptional activity and TFIIH-associated cdk7 kinase activity at mitosis., Long JJ, Leresche A, Kriwacki RW, Gottesfeld JM., Mol Cell Biol. March 1, 1998; 18 (3): 1467-76.

Control of gene expression in Xenopus early development., Hair A, Prioleau MN, Vassetzky Y, Méchali M., Dev Genet. January 1, 1998; 22 (2): 122-31.

A functional analysis of p53 during early development of Xenopus laevis., Amariglio F, Tchang F, Prioleau MN, Soussi T, Cibert C, Méchali M., Oncogene. October 1, 1997; 15 (18): 2191-9.

Differential mode of TBP utilization in transcription of the tRNA[Ser]Sec gene and TATA-less class III genes., Park JM, Lee JY, Lee JY, Hatfield DL, Lee BJ., Gene. September 1, 1997; 196 (1-2): 99-103.

Association of the nucleolar transcription factor UBF with the transcriptionally inactive rRNA genes of pronuclei and early Xenopus embryos., Bell P, Mais C, McStay B, Scheer U., J Cell Sci. September 1, 1997; 110 ( Pt 17) 2053-63.                  

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