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Summary Expression Phenotypes Gene Literature (94) GO Terms (4) Nucleotides (76) Proteins (25) Interactants (377) Wiki
XB--5897727

Papers associated with h4c4



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Stem cell development involves divergent thyroid hormone receptor subtype expression and epigenetic modifications in the Xenopus metamorphosing intestine., Hasebe T, Fujimoto K, Buchholz DR, Ishizuya-Oka A., Gen Comp Endocrinol. June 1, 2020; 292 113441.                  

The secreted BMP antagonist ERFE is required for the development of a functional circulatory system in Xenopus., Melchert J, Henningfeld KA, Richts S, Lingner T, Jonigk D, Pieler T., Dev Biol. March 15, 2020; 459 (2): 138-148.                                

Role of remodeling and spacing factor 1 in histone H2A ubiquitination-mediated gene silencing., Zhang Z, Zhang Z, Jones AE, Wu W, Kim J, Kang Y, Bi X, Gu Y, Popov IK, Renfrow MB, Vassylyeva MN, Vassylyev DG, Giles KE, Chen D, Kumar A, Fan Y, Tong Y, Liu CF, An W, Chang C, Luo J, Chow LT, Wang H., Proc Natl Acad Sci U S A. September 19, 2017; 114 (38): E7949-E7958.                          

FoxD1 protein interacts with Wnt and BMP signaling to differentially pattern mesoderm and neural tissue., Polevoy H, Malyarova A, Fonar Y, Elias S, Frank D., Int J Dev Biol. January 1, 2017; 61 (3-4-5): 293-302.              

A cell-free CENP-A assembly system defines the chromatin requirements for centromere maintenance., Westhorpe FG, Fuller CJ, Straight AF., J Cell Biol. June 22, 2015; 209 (6): 789-801.          

HDAC1 Regulates the Proliferation of Radial Glial Cells in the Developing Xenopus Tectum., Tao Y, Ruan H, Guo X, Li L, Shen W., PLoS One. March 16, 2015; 10 (3): e0120118.                

Histone titration against the genome sets the DNA-to-cytoplasm threshold for the Xenopus midblastula transition., Amodeo AA, Jukam D, Straight AF, Skotheim JM., Proc Natl Acad Sci U S A. March 10, 2015; 112 (10): E1086-95.

A distinct switch in interactions of the histone H4 tail domain upon salt-dependent folding of nucleosome arrays., Pepenella S, Murphy KJ, Hayes JJ., J Biol Chem. September 26, 2014; 289 (39): 27342-27351.

Quantitative proteomics of Xenopus laevis embryos: expression kinetics of nearly 4000 proteins during early development., Sun L, Bertke MM, Champion MM, Zhu G, Huber PW, Dovichi NJ., Sci Rep. February 26, 2014; 4 4365.                              

The Prdm13 histone methyltransferase encoding gene is a Ptf1a-Rbpj downstream target that suppresses glutamatergic and promotes GABAergic neuronal fate in the dorsal neural tube., Hanotel J, Bessodes N, Thélie A, Hedderich M, Parain K, Van Driessche B, Brandão Kde O, Kricha S, Jorgensen MC, Grapin-Botton A, Serup P, Van Lint C, Perron M, Pieler T, Henningfeld KA, Bellefroid EJ., Dev Biol. February 15, 2014; 386 (2): 340-57.                                                                    

Validation of novel reference genes for RT-qPCR studies of gene expression in Xenopus tropicalis during embryonic and post-embryonic development., Dhorne-Pollet S, Thélie A, Pollet N., Dev Dyn. June 1, 2013; 242 (6): 709-17.    

Heterochromatin protein Sir3 induces contacts between the amino terminus of histone H4 and nucleosomal DNA., Wang F, Li G, Altaf M, Lu C, Currie MA, Johnson A, Moazed D., Proc Natl Acad Sci U S A. May 21, 2013; 110 (21): 8495-500.

Characterization of Xenopus tissue inhibitor of metalloproteinases-2: a role in regulating matrix metalloproteinase activity during development., Fu L, Sun G, Fiorentino M, Shi YB., PLoS One. January 1, 2012; 7 (5): e36707.            

MicroRNA-mediated mRNA translation activation in quiescent cells and oocytes involves recruitment of a nuclear microRNP., Truesdell SS, Mortensen RD, Seo M, Schroeder JC, Lee JH, LeTonqueze O, Vasudevan S., Sci Rep. January 1, 2012; 2 842.                

The development of the adult intestinal stem cells: Insights from studies on thyroid hormone-dependent amphibian metamorphosis., Shi YB, Hasebe T, Fu L, Fujimoto K, Ishizuya-Oka A., Cell Biosci. September 6, 2011; 1 (1): 30.        

Histone deacetylase activity is necessary for left-right patterning during vertebrate development., Carneiro K, Donnet C, Rejtar T, Karger BL, Barisone GA, Díaz E, Kortagere S, Lemire JM, Levin M., BMC Dev Biol. May 20, 2011; 11 29.              

EBF factors drive expression of multiple classes of target genes governing neuronal development., Green YS, Vetter ML., Neural Dev. April 30, 2011; 6 19.                                                          

Barhl2 limits growth of the diencephalic primordium through Caspase3 inhibition of beta-catenin activation., Juraver-Geslin HA, Ausseil JJ, Wassef M, Durand BC., Proc Natl Acad Sci U S A. February 8, 2011; 108 (6): 2288-93.                    

The role of histone H4 biotinylation in the structure of nucleosomes., Filenko NA, Kolar C, West JT, Smith SA, Hassan YI, Borgstahl GE, Zempleni J, Lyubchenko YL., PLoS One. January 7, 2011; 6 (1): e16299.          

Stage-specific histone modification profiles reveal global transitions in the Xenopus embryonic epigenome., Schneider TD, Arteaga-Salas JM, Mentele E, David R, Nicetto D, Imhof A, Rupp RA., PLoS One. January 1, 2011; 6 (7): e22548.            

HDAC activity is required during Xenopus tail regeneration., Tseng AS, Carneiro K, Lemire JM, Levin M., PLoS One. January 1, 2011; 6 (10): e26382.              

Nucleosome interactions and stability in an ordered nucleosome array model system., Blacketer MJ, Feely SJ, Shogren-Knaak MA., J Biol Chem. November 5, 2010; 285 (45): 34597-607.

Structure of RCC1 chromatin factor bound to the nucleosome core particle., Makde RD, England JR, Yennawar HP, Tan S., Nature. September 30, 2010; 467 (7315): 562-6.        

Role of direct interactions between the histone H4 Tail and the H2A core in long range nucleosome contacts., Sinha D, Shogren-Knaak MA., J Biol Chem. May 28, 2010; 285 (22): 16572-81.

Identification and developmental expression of Xenopus laevis SUMO proteases., Wang Y, Mukhopadhyay D, Mathew S, Hasebe T, Heimeier RA, Azuma Y, Kolli N, Shi YB, Wilkinson KD, Dasso M., PLoS One. December 11, 2009; 4 (12): e8462.          

Xenopus delta-catenin is essential in early embryogenesis and is functionally linked to cadherins and small GTPases., Gu D, Sater AK, Ji H, Cho K, Clark M, Stratton SA, Barton MC, Lu Q, McCrea PD., J Cell Sci. November 15, 2009; 122 (Pt 22): 4049-61.            

Recognition imaging of acetylated chromatin using a DNA aptamer., Lin L, Fu Q, Williams BA, Azzaz AM, Shogren-Knaak MA, Chaput JC, Lindsay S., Biophys J. September 16, 2009; 97 (6): 1804-7.

Determinants of histone H4 N-terminal domain function during nucleosomal array oligomerization: roles of amino acid sequence, domain length, and charge density., McBryant SJ, Klonoski J, Sorensen TC, Norskog SS, Williams S, Resch MG, Toombs JA, Hobdey SE, Hansen JC., J Biol Chem. June 19, 2009; 284 (25): 16716-22.

The Gcn5 bromodomain of the SAGA complex facilitates cooperative and cross-tail acetylation of nucleosomes., Li S, Shogren-Knaak MA., J Biol Chem. April 3, 2009; 284 (14): 9411-7.

Novel functions of protein arginine methyltransferase 1 in thyroid hormone receptor-mediated transcription and in the regulation of metamorphic rate in Xenopus laevis., Matsuda H, Paul BD, Choi CY, Hasebe T, Shi YB., Mol Cell Biol. February 1, 2009; 29 (3): 745-57.

Analysis of histones in Xenopus laevis. I. A distinct index of enriched variants and modifications exists in each cell type and is remodeled during developmental transitions., Shechter D, Nicklay JJ, Chitta RK, Shabanowitz J, Hunt DF, Allis CD., J Biol Chem. January 9, 2009; 284 (2): 1064-74.

Analysis of histones in Xenopus laevis. II. mass spectrometry reveals an index of cell type-specific modifications on H3 and H4., Nicklay JJ, Shechter D, Chitta RK, Garcia BA, Shabanowitz J, Allis CD, Hunt DF., J Biol Chem. January 9, 2009; 284 (2): 1075-85.

A role of D domain-related proteins in differentiation and migration of embryonic cells in Xenopus laevis., Shibata T, Takahashi Y, Tasaki J, Saito Y, Izutsu Y, Maéno M., Mech Dev. January 1, 2008; 125 (3-4): 284-98.                            

Structural basis for the histone chaperone activity of Asf1., English CM, Adkins MW, Carson JJ, Churchill ME, Tyler JK., Cell. November 3, 2006; 127 (3): 495-508.

XMam1, Xenopus Mastermind1, induces neural gene expression in a Notch-independent manner., Katada T, Ito M, Kojima Y, Miyatani S, Kinoshita T., Mech Dev. November 1, 2006; 123 (11): 851-9.            

Isolation and comparative expression analysis of the Myc-regulatory proteins Mad1, Mad3, and Mnt during Xenopus development., Juergens K, Rust B, Pieler T, Henningfeld KA., Dev Dyn. August 1, 2005; 233 (4): 1554-9.                                        

Temporal analysis of the early BMP functions identifies distinct anti-organizer and mesoderm patterning phases., Marom K, Levy V, Pillemer G, Fainsod A., Dev Biol. June 15, 2005; 282 (2): 442-54.              

The intracellular domain of X-Serrate-1 is cleaved and suppresses primary neurogenesis in Xenopus laevis., Kiyota T, Kinoshita T., Mech Dev. June 1, 2004; 121 (6): 573-85.              

The enhancement of histone H4 and H2A serine 1 phosphorylation during mitosis and S-phase is evolutionarily conserved., Barber CM, Turner FB, Wang Y, Hagstrom K, Taverna SD, Mollah S, Ueberheide B, Meyer BJ, Hunt DF, Cheung P, Allis CD., Chromosoma. May 1, 2004; 112 (7): 360-71.

Regulation of Msx genes by a Bmp gradient is essential for neural crest specification., Tribulo C, Aybar MJ, Nguyen VH, Mullins MC, Mayor R., Development. December 1, 2003; 130 (26): 6441-52.            

Progesterone and glucocorticoid receptors recruit distinct coactivator complexes and promote distinct patterns of local chromatin modification., Li X, Wong J, Tsai SY, Tsai MJ, O'Malley BW., Mol Cell Biol. June 1, 2003; 23 (11): 3763-73.

Chromatin fiber folding: requirement for the histone H4 N-terminal tail., Dorigo B, Schalch T, Bystricky K, Richmond TJ., J Mol Biol. March 14, 2003; 327 (1): 85-96.

Sequence and expression of FoxB2 (XFD-5) and FoxI1c (XFD-10) in Xenopus embryogenesis., Pohl BS, Knöchel S, Dillinger K, Knöchel W., Mech Dev. September 1, 2002; 117 (1-2): 283-7.        

Negative regulation of transcription by the type II arginine methyltransferase PRMT5., Fabbrizio E, El Messaoudi S, Polanowska J, Paul C, Cook JR, Lee JH, Negre V, Rousset M, Pestka S, Le Cam A, Sardet C., EMBO Rep. July 1, 2002; 3 (7): 641-5.

The APC regulator CDH1 is essential for the progression of embryonic cell cycles in Xenopus., Zhou Y, Ching YP, Ng RW, Jin DY., Biochem Biophys Res Commun. May 31, 2002; 294 (1): 120-6.        

Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor., Wang H, Huang ZQ, Xia L, Feng Q, Erdjument-Bromage H, Strahl BD, Briggs SD, Allis CD, Wong J, Tempst P, Zhang Y., Science. August 3, 2001; 293 (5531): 853-7.

foxD5a, a Xenopus winged helix gene, maintains an immature neural ectoderm via transcriptional repression that is dependent on the C-terminal domain., Sullivan SA, Akers L, Moody SA., Dev Biol. April 15, 2001; 232 (2): 439-57.            

The histone H4 acetyltransferase MOF uses a C2HC zinc finger for substrate recognition., Akhtar A, Becker PB., EMBO Rep. February 1, 2001; 2 (2): 113-8.

Critical role for the histone H4 N terminus in nucleosome remodeling by ISWI., Clapier CR, Längst G, Corona DF, Becker PB, Nightingale KP., Mol Cell Biol. February 1, 2001; 21 (3): 875-83.

The pitx2 homeobox protein is required early for endoderm formation and nodal signaling. ., Faucourt M, Houliston E, Besnardeau L, Kimelman D, Lepage T., Dev Biol. January 15, 2001; 229 (2): 287-306.                

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