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Summary Expression Phenotypes Gene Literature (97) GO Terms (6) Nucleotides (254) Proteins (55) Interactants (932) Wiki
XB--6258722

Papers associated with crebbp



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referenced by:

Pleiotropy of autism-associated chromatin regulators., Lasser M, Sun N, Xu Y, Xu Y, Wang S, Drake S, Law K, Gonzalez S, Wang B, Drury V, Castillo O, Zaltsman Y, Dea J, Bader E, McCluskey KE, State MW, Willsey AJ, Willsey HR., Development. July 15, 2023; 150 (14):                   

A convergent molecular network underlying autism and congenital heart disease., Rosenthal SB, Willsey HR, Xu Y, Xu Y, Mei Y, Dea J, Wang S, Curtis C, Sempou E, Khokha MK, Chi NC, Willsey AJ, Fisch KM, Ideker T., Cell Syst. November 17, 2021; 12 (11): 1094-1107.e6.            

Three-dimensional folding dynamics of the Xenopus tropicalis genome., Niu L, Shen W, Shi Z, Tan Y, He N, Wan J, Sun J, Zhang Y, Huang Y, Wang W, Fang C, Li J, Zheng P, Cheung E, Chen Y, Chen Y, Li L, Hou C., Nat Genet. July 1, 2021; 53 (7): 1075-1087.                                    

Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR, van Genesen S, Li Q, Grasso A, Frölich S, van der Sande M, van Heeringen SJ, Veenstra GJC., EMBO J. May 3, 2021; 40 (9): e104913.                        

Regeneration enhancers: A clue to reactivation of developmental genes., Suzuki N, Ochi H., Dev Growth Differ. June 1, 2020; 62 (5): 343-354.        

Chromatin accessibility and histone acetylation in the regulation of competence in early development., Esmaeili M, Blythe SA, Tobias JW, Zhang K, Yang J, Klein PS., Dev Biol. June 1, 2020; 462 (1): 20-35.                

SEA version 3.0: a comprehensive extension and update of the Super-Enhancer archive., Chen C, Zhou D, Gu Y, Wang C, Zhang M, Lin X, Xing J, Wang H, Zhang Y., Nucleic Acids Res. January 8, 2020; 48 (D1): D198-D203.      

Single Amino Acid Change Underlies Distinct Roles of H2A.Z Subtypes in Human Syndrome., Greenberg RS, Long HK, Swigut T, Wysocka J., Cell. September 5, 2019; 178 (6): 1421-1436.e24.                                

Integration of Wnt and FGF signaling in the Xenopus gastrula at TCF and Ets binding sites shows the importance of short-range repression by TCF in patterning the marginal zone., Kjolby RAS, Truchado-Garcia M, Iruvanti S, Harland RM., Development. August 9, 2019; 146 (15):                           

Alteration of the Retinoid Acid-CBP Signaling Pathway in Neural Crest Induction Contributes to Enteric Nervous System Disorder., Li C, Hu R, Hou N, Wang Y, Wang Z, Yang T, Gu Y, He M, Shi Y, Chen J, Song W, Li T., Front Pediatr. December 3, 2018; 6 382.                        

Nut Directs p300-Dependent, Genome-Wide H4 Hyperacetylation in Male Germ Cells., Shiota H, Barral S, Buchou T, Tan M, Couté Y, Charbonnier G, Reynoird N, Boussouar F, Gérard M, Zhu M, Bargier L, Puthier D, Chuffart F, Bourova-Flin E, Picaud S, Filippakopoulos P, Goudarzi A, Ibrahim Z, Panne D, Rousseaux S, Zhao Y, Khochbin S., Cell Rep. September 25, 2018; 24 (13): 3477-3487.e6.

ADAMTS9, a member of the ADAMTS family, in Xenopus development., Desanlis I, Felstead HL, Edwards DR, Wheeler GN., Gene Expr Patterns. September 1, 2018; 29 72-81.                

Identifying Dysregulated Epigenetic Enzyme Activity in Castrate-Resistant Prostate Cancer Development., Lee JH, Yang B, Lindahl AJ, Damaschke N, Boersma MD, Huang W, Corey E, Jarrard DF, Denu JM., ACS Chem Biol. November 17, 2017; 12 (11): 2804-2814.

Regulatory remodeling in the allo-tetraploid frog Xenopus laevis., Elurbe DM, Paranjpe SS, Georgiou G, van Kruijsbergen I, Bogdanovic O, Gibeaux R, Heald R, Lister R, Huynen MA, van Heeringen SJ, Veenstra GJC., Genome Biol. October 24, 2017; 18 (1): 198.              

Xenopus genomic data and browser resources., Vize PD, Zorn AM., Dev Biol. June 15, 2017; 426 (2): 194-199.  

Genomic organization and modulation of gene expression of the TGF-β and FGF pathways in the allotetraploid frog Xenopus laevis., Suzuki A, Yoshida H, van Heeringen SJ, Takebayashi-Suzuki K, Veenstra GJC, Taira M., Dev Biol. June 15, 2017; 426 (2): 336-359.                

High variability of expression profiles of homeologous genes for Wnt, Hh, Notch, and Hippo signaling pathways in Xenopus laevis., Michiue T, Yamamoto T, Yasuoka Y, Goto T, Ikeda T, Nagura K, Nakayama T, Taira M, Kinoshita T., Dev Biol. June 15, 2017; 426 (2): 270-290.                  

Genomic integration of Wnt/β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs., Stevens ML, Chaturvedi P, Rankin SA, Rankin SA, Macdonald M, Jagannathan S, Yukawa M, Barski A, Zorn AM., Development. April 1, 2017; 144 (7): 1283-1295.                            

HMGB1 Stimulates Activity of Polymerase β on Nucleosome Substrates., Balliano A, Hao F, Njeri C, Balakrishnan L, Hayes JJ., Biochemistry. January 31, 2017; 56 (4): 647-656.

High-throughput analysis reveals novel maternal germline RNAs crucial for primordial germ cell preservation and proper migration., Owens DA, Butler AM, Aguero TH, Newman KM, Van Booven D, King ML., Development. January 15, 2017; 144 (2): 292-304.                                                                                        

Frogs model man: In vivo thyroid hormone signaling during development., Sachs LM, Buchholz DR., Genesis. January 1, 2017; 55 (1-2):       

Genome evolution in the allotetraploid frog Xenopus laevis., Session AM, Uno Y, Kwon T, Chapman JA, Toyoda A, Takahashi S, Fukui A, Hikosaka A, Suzuki A, Kondo M, van Heeringen SJ, Quigley I, Heinz S, Ogino H, Ochi H, Hellsten U, Lyons JB, Simakov O, Putnam N, Stites J, Kuroki Y, Tanaka T, Michiue T, Watanabe M, Bogdanovic O, Lister R, Georgiou G, Paranjpe SS, van Kruijsbergen I, Shu S, Carlson J, Kinoshita T, Ohta Y, Mawaribuchi S, Jenkins J, Grimwood J, Schmutz J, Mitros T, Mozaffari SV, Suzuki Y, Haramoto Y, Yamamoto TS, Takagi C, Heald R, Miller K, Haudenschild C, Kitzman J, Nakayama T, Izutsu Y, Robert J, Fortriede J, Burns K, Lotay V, Karimi K, Yasuoka Y, Dichmann DS, Flajnik MF, Houston DW, Shendure J, DuPasquier L, Vize PD, Zorn AM, Ito M, Marcotte EM, Wallingford JB, Ito Y, Asashima M, Ueno N, Matsuda Y, Veenstra GJ, Fujiyama A, Harland RM, Taira M, Rokhsar DS., Nature. October 20, 2016; 538 (7625): 336-343.                              

A phospho-dependent mechanism involving NCoR and KMT2D controls a permissive chromatin state at Notch target genes., Oswald F, Rodriguez P, Giaimo BD, Antonello ZA, Mira L, Mittler G, Thiel VN, Collins KJ, Tabaja N, Cizelsky W, Rothe M, Kühl SJ, Kühl SJ, Kühl M, Ferrante F, Hein K, Kovall RA, Dominguez M, Borggrefe T., Nucleic Acids Res. June 2, 2016; 44 (10): 4703-20.                              

FoxH1 mediates a Grg4 and Smad2 dependent transcriptional switch in Nodal signaling during Xenopus mesoderm development., Reid CD, Steiner AB, Yaklichkin S, Lu Q, Wang S, Hennessy M, Kessler DS., Dev Biol. June 1, 2016; 414 (1): 34-44.                  

Active DNA demethylation at enhancers during the vertebrate phylotypic period., Bogdanović O, Smits AH, de la Calle Mustienes E, Tena JJ, Ford E, Williams R, Senanayake U, Schultz MD, Hontelez S, van Kruijsbergen I, Rayon T, Gnerlich F, Carell T, Veenstra GJ, Manzanares M, Sauka-Spengler T, Ecker JR, Vermeulen M, Gómez-Skarmeta JL, Lister R., Nat Genet. April 1, 2016; 48 (4): 417-26.      

Embryonic transcription is controlled by maternally defined chromatin state., Hontelez S, van Kruijsbergen I, Georgiou G, van Heeringen SJ, Bogdanovic O, Lister R, Veenstra GJC., Nat Commun. December 18, 2015; 6 10148.                

More similar than you think: Frog metamorphosis as a model of human perinatal endocrinology., Buchholz DR., Dev Biol. December 15, 2015; 408 (2): 188-95.        

Xenbase: Core features, data acquisition, and data processing., James-Zorn C, Ponferrada VG, Burns KA, Fortriede JD, Lotay VS, Liu Y, Brad Karpinka J, Karimi K, Zorn AM, Vize PD., Genesis. August 1, 2015; 53 (8): 486-97.          

Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification., Yasuoka Y, Suzuki Y, Takahashi S, Someya H, Sudou N, Haramoto Y, Cho KW, Asashima M, Sugano S, Taira M., Nat Commun. July 9, 2014; 5 4322.        

Acetylation of histone H3 at lysine 64 regulates nucleosome dynamics and facilitates transcription., Di Cerbo V, Mohn F, Ryan DP, Montellier E, Kacem S, Tropberger P, Kallis E, Holzner M, Hoerner L, Feldmann A, Richter FM, Bannister AJ, Mittler G, Michaelis J, Khochbin S, Feil R, Schuebeler D, Owen-Hughes T, Daujat S, Schneider R., Elife. March 25, 2014; 3 e01632.                                  

Epigenomic annotation of enhancers predicts transcriptional regulators of human neural crest., Rada-Iglesias A, Bajpai R, Prescott S, Brugmann SA, Swigut T, Wysocka J., Cell Stem Cell. November 2, 2012; 11 (5): 633-48.

Brain-specific promoter/exon I.f of the cyp19a1 (aromatase) gene in Xenopus laevis., Nakagawa T, Iwabuchi J., J Steroid Biochem Mol Biol. November 1, 2012; 132 (3-5): 247-55.

SUMOylated SoxE factors recruit Grg4 and function as transcriptional repressors in the neural crest., Lee PC, Taylor-Jaffe KM, Nordin KM, Prasad MS, Lander RM, LaBonne C., J Cell Biol. September 3, 2012; 198 (5): 799-813.              

Transcriptional integration of Wnt and Nodal pathways in establishment of the Spemann organizer., Reid CD, Zhang Y, Zhang Y, Sheets MD, Kessler DS., Dev Biol. August 15, 2012; 368 (2): 231-41.                    

The development of the adult intestinal stem cells: Insights from studies on thyroid hormone-dependent amphibian metamorphosis., Shi YB, Hasebe T, Fu L, Fujimoto K, Ishizuya-Oka A., Cell Biosci. September 6, 2011; 1 (1): 30.        

xCITED2 Induces Neural Genes in Animal Cap Explants of Xenopus Embryos., Yoon J, Kim JH, Lee OJ, Yu SB, Yu SB, Kim JI, Kim SC, Park JB, Lee JY, Kim J., Exp Neurobiol. September 1, 2011; 20 (3): 123-9.        

Alternative TFAP2A isoforms have distinct activities in breast cancer., Berlato C, Chan KV, Price AM, Canosa M, Scibetta AG, Hurst HC., Breast Cancer Res. March 4, 2011; 13 (2): R23.              

Intrinsic transition of embryonic stem-cell differentiation into neural progenitors., Kamiya D, Banno S, Sasai N, Ohgushi M, Inomata H, Watanabe K, Kawada M, Yakura R, Kiyonari H, Nakao K, Jakt LM, Nishikawa S, Sasai Y., Nature. February 24, 2011; 470 (7335): 503-9.

A unique chromatin signature uncovers early developmental enhancers in humans., Rada-Iglesias A, Bajpai R, Swigut T, Brugmann SA, Flynn RA, Wysocka J., Nature. February 10, 2011; 470 (7333): 279-83.

Molecular and genetic studies suggest that thyroid hormone receptor is both necessary and sufficient to mediate the developmental effects of thyroid hormone., Das B, Matsuda H, Fujimoto K, Sun G, Matsuura K, Shi YB, Shi YB., Gen Comp Endocrinol. September 1, 2010; 168 (2): 174-80.        

Closing plant stomata requires a homolog of an aluminum-activated malate transporter., Sasaki T, Mori IC, Furuichi T, Munemasa S, Toyooka K, Matsuoka K, Murata Y, Yamamoto Y., Plant Cell Physiol. March 1, 2010; 51 (3): 354-65.            

Functional characterization of two CITED3 homologs (gcCITED3a and gcCITED3b) in the hypoxia-tolerant grass carp, Ctenopharyngodon idellus., Ng PK, Chiu SK, Kwong TF, Yu RM, Wong MM, Kong RY., BMC Mol Biol. November 3, 2009; 10 101.              

An integrated genome screen identifies the Wnt signaling pathway as a major target of WT1., Kim MK, McGarry TJ, O Broin P, Flatow JM, Golden AA, Licht JD., Proc Natl Acad Sci U S A. July 7, 2009; 106 (27): 11154-9.

The adenoviral E1A protein displaces corepressors and relieves gene repression by unliganded thyroid hormone receptors in vivo., Sato Y, Ding A, Heimeier RA, Yousef AF, Mymryk JS, Walfish PG, Shi YB., Cell Res. June 1, 2009; 19 (6): 783-92.

CRX controls retinal expression of the X-linked juvenile retinoschisis (RS1) gene., Langmann T, Lai CC, Weigelt K, Tam BM, Warneke-Wittstock R, Moritz OL, Weber BH., Nucleic Acids Res. November 1, 2008; 36 (20): 6523-34.            

Gene expression and tissue distribution of cytoglobin and myoglobin in the Amphibia and Reptilia: possible compensation of myoglobin with cytoglobin in skeletal muscle cells of anurans that lack the myoglobin gene., Xi Y, Obara M, Ishida Y, Ikeda S, Yoshizato K., Gene. August 15, 2007; 398 (1-2): 94-102.            

SRC-p300 coactivator complex is required for thyroid hormone-induced amphibian metamorphosis., Paul BD, Buchholz DR, Fu L, Shi YB., J Biol Chem. March 9, 2007; 282 (10): 7472-81.

deltaEF1 and SIP1 are differentially expressed and have overlapping activities during Xenopus embryogenesis., van Grunsven LA, Taelman V, Michiels C, Opdecamp K, Huylebroeck D, Bellefroid EJ., Dev Dyn. June 1, 2006; 235 (6): 1491-500.  

Mechanism of polymerase II transcription repression by the histone variant macroH2A., Doyen CM, An W, Angelov D, Bondarenko V, Mietton F, Studitsky VM, Hamiche A, Roeder RG, Bouvet P, Dimitrov S., Mol Cell Biol. February 1, 2006; 26 (3): 1156-64.

XBP1 forms a regulatory loop with BMP-4 and suppresses mesodermal and neural differentiation in Xenopus embryos., Cao Y, Cao Y, Knöchel S, Oswald F, Donow C, Zhao H, Knöchel W., Mech Dev. January 1, 2006; 123 (1): 84-96.      

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