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Summary Expression Phenotypes Gene Literature (27) GO Terms (3) Nucleotides (117) Proteins (64) Interactants (724) Wiki
XB--482520

Papers associated with bix1.1



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Transmembrane protein 150b attenuates BMP signaling in the Xenopus organizer., Keum BR, Yeo I, Koo Y, Han W, Choi SC, Kim GH, Han JK., J Cell Physiol. August 1, 2023; 238 (8): 1850-1866.                        

Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions., Johnson K, Freedman S, Braun R, LaBonne C., BMC Genomics. October 23, 2022; 23 (1): 723.                                  

Hes5.9 Coordinate FGF and Notch Signaling to Modulate Gastrulation via Regulating Cell Fate Specification and Cell Migration in Xenopus tropicalis., Huang X, Zhang L, Yang S, Zhang Y, Wu M, Chen P., Genes (Basel). November 18, 2020; 11 (11):                   

Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network., Mukherjee S, Chaturvedi P, Rankin SA, Rankin SA, Fish MB, Wlizla M, Paraiso KD, MacDonald M, Chen X, Weirauch MT, Blitz IL, Cho KW, Zorn AM., Elife. September 7, 2020; 9                           

Both Nuclear Size and DNA Amount Contribute to Midblastula Transition Timing in Xenopus laevis., Jevtić P, Levy DL., Sci Rep. August 11, 2017; 7 (1): 7908.            

Conservatism and variability of gene expression profiles among homeologous transcription factors in Xenopus laevis., Watanabe M, Yasuoka Y, Mawaribuchi S, Kuretani A, Ito M, Kondo M, Ochi H, Ogino H, Fukui A, Taira M, Kinoshita T., Dev Biol. June 15, 2017; 426 (2): 301-324.                          

High variability of expression profiles of homeologous genes for Wnt, Hh, Notch, and Hippo signaling pathways in Xenopus laevis., Michiue T, Yamamoto T, Yasuoka Y, Goto T, Ikeda T, Nagura K, Nakayama T, Taira M, Kinoshita T., Dev Biol. June 15, 2017; 426 (2): 270-290.                  

A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM, Paraiso KD, Blitz IL, Cho KWY., Semin Cell Dev Biol. June 1, 2017; 66 12-24.    

Genome evolution in the allotetraploid frog Xenopus laevis., Session AM, Uno Y, Kwon T, Chapman JA, Toyoda A, Takahashi S, Fukui A, Hikosaka A, Suzuki A, Kondo M, van Heeringen SJ, Quigley I, Heinz S, Ogino H, Ochi H, Hellsten U, Lyons JB, Simakov O, Putnam N, Stites J, Kuroki Y, Tanaka T, Michiue T, Watanabe M, Bogdanovic O, Lister R, Georgiou G, Paranjpe SS, van Kruijsbergen I, Shu S, Carlson J, Kinoshita T, Ohta Y, Mawaribuchi S, Jenkins J, Grimwood J, Schmutz J, Mitros T, Mozaffari SV, Suzuki Y, Haramoto Y, Yamamoto TS, Takagi C, Heald R, Miller K, Haudenschild C, Kitzman J, Nakayama T, Izutsu Y, Robert J, Fortriede J, Burns K, Lotay V, Karimi K, Yasuoka Y, Dichmann DS, Flajnik MF, Houston DW, Shendure J, DuPasquier L, Vize PD, Zorn AM, Ito M, Marcotte EM, Wallingford JB, Ito Y, Asashima M, Ueno N, Matsuda Y, Veenstra GJ, Fujiyama A, Harland RM, Taira M, Rokhsar DS., Nature. October 20, 2016; 538 (7625): 336-343.                              

Nuclear size scaling during Xenopus early development contributes to midblastula transition timing., Jevtić P, Levy DL., Curr Biol. January 5, 2015; 25 (1): 45-52.                

Genome-wide view of TGFβ/Foxh1 regulation of the early mesendoderm program., Chiu WT, Charney Le R, Blitz IL, Fish MB, Li Y, Biesinger J, Xie X, Cho KW., Development. December 1, 2014; 141 (23): 4537-47.                                  

High-resolution analysis of gene activity during the Xenopus mid-blastula transition., Collart C, Owens ND, Bhaw-Rosun L, Cooper B, De Domenico E, Patrushev I, Sesay AK, Smith JN, Smith JC, Gilchrist MJ., Development. May 1, 2014; 141 (9): 1927-39.                  

Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns., Zheng Z, Christley S, Chiu WT, Blitz IL, Xie X, Cho KW, Nie Q., BMC Syst Biol. January 8, 2014; 8 3.                  

The Mix family of homeobox genes--key regulators of mesendoderm formation during vertebrate development., Pereira LA, Wong MS, Mei Lim S, Stanley EG, Elefanty AG., Dev Biol. July 15, 2012; 367 (2): 163-77.        

fus/TLS orchestrates splicing of developmental regulators during gastrulation., Dichmann DS, Harland RM., Genes Dev. June 15, 2012; 26 (12): 1351-63.                        

Toward an unbiased evolutionary platform for unraveling Xenopus developmental gene networks., Beer R, Wagner F, Grishkevich V, Peshkin L, Yanai I., Genesis. March 1, 2012; 50 (3): 186-91.        

Global analysis of the transcriptional network controlling Xenopus endoderm formation., Sinner D, Kirilenko P, Rankin S, Rankin S, Wei E, Howard L, Kofron M, Heasman J, Woodland HR, Zorn AM., Development. May 1, 2006; 133 (10): 1955-66.              

Inhibition of neurogenesis by SRp38, a neuroD-regulated RNA-binding protein., Liu KJ, Liu KJ, Harland RM., Development. April 1, 2005; 132 (7): 1511-23.                

Identification of novel genes affecting mesoderm formation and morphogenesis through an enhanced large scale functional screen in Xenopus., Chen JA, Voigt J, Gilchrist M, Papalopulu N, Amaya E., Mech Dev. March 1, 2005; 122 (3): 307-31.                                                                                                                      

Regulation of apoptosis in theXenopus embryo by Bix3., Trindade M, Messenger N, Papin C, Grimmer D, Fairclough L, Tada M, Smith JC., Development. October 1, 2003; 130 (19): 4611-22.                  

Molecular components of the endoderm specification pathway in Xenopus tropicalis., D'Souza A, Lee M, Taverner N, Mason J, Carruthers S, Smith JC, Amaya E, Papalopulu N, Zorn AM., Dev Dyn. January 1, 2003; 226 (1): 118-27.                            

Xenopus Brachyury regulates mesodermal expression of Zic3, a gene controlling left-right asymmetry., Kitaguchi T, Mizugishi K, Hatayama M, Aruga J, Mikoshiba K., Dev Growth Differ. February 1, 2002; 44 (1): 55-61.        

Making mesoderm--upstream and downstream of Xbra., Smith JC., Int J Dev Biol. January 1, 2001; 45 (1): 219-24.    

Maternal VegT is the initiator of a molecular network specifying endoderm in Xenopus laevis., Xanthos JB, Kofron M, Wylie C, Heasman J., Development. January 1, 2001; 128 (2): 167-80.

A screen for targets of the Xenopus T-box gene Xbra., Saka Y, Tada M, Smith JC., Mech Dev. May 1, 2000; 93 (1-2): 27-39.                  

Homeodomain and winged-helix transcription factors recruit activated Smads to distinct promoter elements via a common Smad interaction motif., Germain S, Howell M, Esslemont GM, Hill CS., Genes Dev. February 15, 2000; 14 (4): 435-51.                

Bix1, a direct target of Xenopus T-box genes, causes formation of ventral mesoderm and endoderm., Tada M, Casey ES, Fairclough L, Smith JC., Development. October 1, 1998; 125 (20): 3997-4006.

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