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Summary Expression Gene Literature (288) GO Terms (13) Nucleotides (49) Proteins (33) Interactants (506) Wiki
XB--485758

Papers associated with nodal6

Search for nodal6 morpholinos using Textpresso

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13 paper(s) referencing morpholinos

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Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network., Mukherjee S, Chaturvedi P, Rankin SA, Rankin SA, Fish MB, Wlizla M, Paraiso KD, MacDonald M, Chen X, Weirauch MT, Blitz IL, Cho KW, Zorn AM., Elife. January 1, 2020; 9                       


Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation., Paraiso KD, Blitz IL, Coley M, Cheung J, Sudou N, Taira M, Cho KWY., Cell Rep. January 1, 2019; 27 (10): 2962-2977.e5.                          


Roles of Xenopus chemokine ligand CXCLh (XCXCLh) in early embryogenesis., Goto T, Ito Y, Michiue T., Dev Growth Differ. May 1, 2018; 60 (4): 226-238.              


A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM, Paraiso KD, Blitz IL, Cho KWY., Semin Cell Dev Biol. January 1, 2017; 66 12-24.    


Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis., Ding Y, Ploper D, Sosa EA, Colozza G, Moriyama Y, Benitez MD, Zhang K, Merkurjev D, De Robertis EM., Proc Natl Acad Sci U S A. January 1, 2017; 114 (15): E3081-E3090.                        


Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development., Owens ND, Blitz IL, Lane MA, Patrushev I, Overton JD, Gilchrist MJ, Cho KW, Khokha MK., Cell Rep. January 26, 2016; 14 (3): 632-47.                                                  


FoxH1 mediates a Grg4 and Smad2 dependent transcriptional switch in Nodal signaling during Xenopus mesoderm development., Reid CD, Steiner AB, Yaklichkin S, Lu Q, Wang S, Hennessy M, Kessler DS., Dev Biol. January 1, 2016; 414 (1): 34-44.                  


Genome evolution in the allotetraploid frog Xenopus laevis., Session AM, Uno Y, Kwon T, Chapman JA, Toyoda A, Takahashi S, Fukui A, Hikosaka A, Suzuki A, Suzuki A, Kondo M, van Heeringen SJ, Quigley I, Heinz S, Ogino H, Ochi H, Hellsten U, Lyons JB, Simakov O, Putnam N, Stites J, Kuroki Y, Tanaka T, Michiue T, Watanabe M, Bogdanovic O, Lister R, Georgiou G, Paranjpe SS, van Kruijsbergen I, Shu S, Carlson J, Kinoshita T, Ohta Y, Mawaribuchi S, Jenkins J, Grimwood J, Schmutz J, Mitros T, Mozaffari SV, Suzuki Y, Haramoto Y, Yamamoto TS, Takagi C, Heald R, Miller K, Haudenschild C, Kitzman J, Nakayama T, Izutsu Y, Robert J, Robert J, Fortriede J, Burns K, Lotay V, Karimi K, Yasuoka Y, Dichmann DS, Flajnik MF, Houston DW, Shendure J, DuPasquier L, Vize PD, Zorn AM, Ito M, Marcotte EM, Wallingford JB, Ito Y, Asashima M, Ueno N, Matsuda Y, Veenstra GJ, Fujiyama A, Harland RM, Taira M, Rokhsar DS., Nature. January 1, 2016; 538 (7625): 336-343.                              


Direct regulation of siamois by VegT is required for axis formation in Xenopus embryo., Li HY, El Yakoubi W, Shi DL., Int J Dev Biol. January 1, 2015; 59 (10-12): 443-51.                          


Two different network topologies yield bistability in models of mesoderm and anterior mesendoderm specification in amphibians., Brown LE, King JR, Loose M., J Theor Biol. July 21, 2014; 353 67-77.                    


High-resolution analysis of gene activity during the Xenopus mid-blastula transition., Collart C, Owens ND, Bhaw-Rosun L, Cooper B, De Domenico E, Patrushev I, Sesay AK, Smith JN, Smith JC, Gilchrist MJ., Development. May 1, 2014; 141 (9): 1927-39.                  


Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns., Zheng Z, Christley S, Chiu WT, Blitz IL, Xie X, Cho KW, Nie Q., BMC Syst Biol. January 8, 2014; 8 3.                  


The Xenopus homologue of Down syndrome critical region protein 6 drives dorsoanterior gene expression and embryonic axis formation by antagonising polycomb group proteins., Li HY, Grifone R, Saquet A, Carron C, Shi DL., Development. December 1, 2013; 140 (24): 4903-13.                                


Coco regulates dorsoventral specification of germ layers via inhibition of TGFβ signalling., Bates TJ, Vonica A, Heasman J, Brivanlou AH, Bell E., Development. October 1, 2013; 140 (20): 4177-81.              


A genome-wide survey of maternal and embryonic transcripts during Xenopus tropicalis development., Paranjpe SS, Jacobi UG, van Heeringen SJ, Veenstra GJ., BMC Genomics. May 28, 2013; 14 762.              


Lin28 proteins are required for germ layer specification in Xenopus., Faas L, Warrander FC, Maguire R, Ramsbottom SA, Quinn D, Genever P, Isaacs HV., Development. March 1, 2013; 140 (5): 976-86.                      


mNanog possesses dorsal mesoderm-inducing ability by modulating both BMP and Activin/nodal signaling in Xenopus ectodermal cells., Miyazaki A, Ishii K, Yamashita S, Nejigane S, Matsukawa S, Ito Y, Onuma Y, Asashima M, Michiue T., PLoS One. January 1, 2012; 7 (10): e46630.        


An essential role for transcription before the MBT in Xenopus laevis., Skirkanich J, Luxardi G, Yang J, Kodjabachian L, Klein PS., Dev Biol. September 15, 2011; 357 (2): 478-91.        


Xrel3/XrelA attenuates β-catenin-mediated transcription during mesoderm formation in Xenopus embryos., Kennedy MW, Kao KR., Biochem J. April 1, 2011; 435 (1): 247-57.


beta-Catenin primes organizer gene expression by recruiting a histone H3 arginine 8 methyltransferase, Prmt2., Blythe SA, Cha SW, Tadjuidje E, Heasman J, Klein PS., Dev Cell. August 17, 2010; 19 (2): 220-31.      


On the fast track to organizer gene expression., Kimelman D., Dev Cell. August 17, 2010; 19 (2): 190-2.


Distinct Xenopus Nodal ligands sequentially induce mesendoderm and control gastrulation movements in parallel to the Wnt/PCP pathway., Luxardi G, Marchal L, Thomé V, Kodjabachian L., Development. February 1, 2010; 137 (3): 417-26.          


Retinoid signaling can repress blastula Wnt signaling and impair dorsal development in Xenopus embryo., Li S, Lou X, Wang J, Liu B, Ma L, Su Z, Ding X., Differentiation. October 1, 2008; 76 (8): 897-907.            


Maternal Tgif1 regulates nodal gene expression in Xenopus., Kerr TC, Cuykendall TN, Luettjohann LC, Houston DW., Dev Dyn. October 1, 2008; 237 (10): 2862-73.    


Identification of a novel conserved mixed-isoform B56 regulatory subunit and spatiotemporal regulation of protein phosphatase 2A during Xenopus laevis development., Baek S, Seeling JM., BMC Dev Biol. May 24, 2007; 7 139.              


Hex acts with beta-catenin to regulate anteroposterior patterning via a Groucho-related co-repressor and Nodal., Zamparini AL, Watts T, Gardner CE, Tomlinson SR, Johnston GI, Brickman JM., Development. September 1, 2006; 133 (18): 3709-22.                                    


Nodal-related gene Xnr5 is amplified in the Xenopus genome., Takahashi S, Onuma Y, Yokota C, Westmoreland JJ, Asashima M, Wright CV., Genesis. July 1, 2006; 44 (7): 309-21.          


SOX7 and SOX18 are essential for cardiogenesis in Xenopus., Zhang C, Basta T, Klymkowsky MW., Dev Dyn. December 1, 2005; 234 (4): 878-91.                    


Maternal Xenopus Zic2 negatively regulates Nodal-related gene expression during anteroposterior patterning., Houston DW, Wylie C., Development. November 1, 2005; 132 (21): 4845-55.              


Depletion of Bmp2, Bmp4, Bmp7 and Spemann organizer signals induces massive brain formation in Xenopus embryos., Reversade B, Kuroda H, Lee H, Mays A, De Robertis EM., Development. August 1, 2005; 132 (15): 3381-92.            


SOX7 is an immediate-early target of VegT and regulates Nodal-related gene expression in Xenopus., Zhang C, Basta T, Fawcett SR, Klymkowsky MW., Dev Biol. February 15, 2005; 278 (2): 526-41.    


New roles for FoxH1 in patterning the early embryo., Kofron M, Puck H, Standley H, Wylie C, Old R, Whitman M, Heasman J., Development. October 1, 2004; 131 (20): 5065-78.              


Activin redux: specification of mesodermal pattern in Xenopus by graded concentrations of endogenous activin B., Piepenburg O, Grimmer D, Williams PH, Smith JC., Development. October 1, 2004; 131 (20): 4977-86.              


Neural induction in Xenopus: requirement for ectodermal and endomesodermal signals via Chordin, Noggin, beta-Catenin, and Cerberus., Kuroda H, Wessely O, De Robertis EM., PLoS Biol. May 1, 2004; 2 (5): E92.                


PP2A:B56epsilon is required for Wnt/beta-catenin signaling during embryonic development., Yang J, Wu J, Tan C, Klein PS., Development. December 1, 2003; 130 (23): 5569-78.            


Nodal signaling in Xenopus gastrulae is cell-autonomous and patterned by beta-catenin., Hashimoto-Partyka MK, Yuge M, Cho KW., Dev Biol. January 1, 2003; 253 (1): 125-38.                    


Beta-catenin/Tcf-regulated transcription prior to the midblastula transition., Yang J, Tan C, Darken RS, Wilson PA, Klein PS., Development. December 1, 2002; 129 (24): 5743-52.


Repression of organizer genes in dorsal and ventral Xenopus cells mediated by maternal XTcf3., Houston DW, Kofron M, Resnik E, Langland R, Destree O, Wylie C, Heasman J., Development. September 1, 2002; 129 (17): 4015-25.          


Multiple interactions between maternally-activated signalling pathways control Xenopus nodal-related genes., Rex M, Hilton E, Old R., Int J Dev Biol. March 1, 2002; 46 (2): 217-26.


Multiple nodal-related genes act coordinately in Xenopus embryogenesis., Onuma Y, Takahashi S, Yokota C, Asashima M., Dev Biol. January 1, 2002; 241 (1): 94-105.


Pluripotent cells (stem cells) and their determination and differentiation in early vertebrate embryogenesis., Tiedemann H, Asashima M, Grunz H, Knöchel W., Dev Growth Differ. October 1, 2001; 43 (5): 469-502.


TGF-beta signalling pathways in early Xenopus development., Hill CS., Curr Opin Genet Dev. October 1, 2001; 11 (5): 533-40.    


Two novel nodal-related genes initiate early inductive events in Xenopus Nieuwkoop center., Takahashi S, Yokota C, Takano K, Tanegashima K, Onuma Y, Goto J, Asashima M., Development. December 1, 2000; 127 (24): 5319-29.

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