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Summary Expression Phenotypes Gene Literature (74) GO Terms (4) Nucleotides (150) Proteins (35) Interactants (505) Wiki
XB--490553

Papers associated with rab40b



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Retinol binding protein 1 affects Xenopus anterior neural development via all-trans retinoic acid signaling., Flach H, Basten T, Schreiner C, Dietmann P, Greco S, Nies L, Roßmanith N, Walter S, Kühl M, Kühl SJ., Dev Dyn. August 1, 2021; 250 (8): 1096-1112.                

Using an aquatic model, Xenopus laevis, to uncover the role of chromodomain 1 in craniofacial disorders., Wyatt BH, Raymond TO, Lansdon LA, Darbro BW, Murray JC, Manak JR, Dickinson AJG., Genesis. February 1, 2021; 59 (1-2): e23394.                        

Znf703 is a novel RA target in the neural plate border., Janesick A, Tang W, Ampig K, Blumberg B., Sci Rep. June 4, 2019; 9 (1): 8275.

Alteration of the Retinoid Acid-CBP Signaling Pathway in Neural Crest Induction Contributes to Enteric Nervous System Disorder., Li C, Hu R, Hou N, Wang Y, Wang Z, Yang T, Gu Y, He M, Shi Y, Chen J, Song W, Li T., Front Pediatr. December 3, 2018; 6 382.                        

Transcriptome analysis of Xenopus orofacial tissues deficient in retinoic acid receptor function., Wahl SE, Wyatt BH, Turner SD, Dickinson AJG., BMC Genomics. November 3, 2018; 19 (1): 795.              

Chromatin Accessibility Impacts Transcriptional Reprogramming in Oocytes., Miyamoto K, Nguyen KT, Allen GE, Jullien J, Kumar D, Otani T, Bradshaw CR, Livesey FJ, Kellis M, Gurdon JB., Cell Rep. July 10, 2018; 24 (2): 304-311.          

Comparison of phenotypic and global gene expression changes in Xenopus tropicalis embryos induced by agonists of RAR and RXR., Zhu J, Hu L, Li L, Huang X, Shi H., Toxicol Appl Pharmacol. September 1, 2017; 330 40-47.

Peroxiredoxin1, a novel regulator of pronephros development, influences retinoic acid and Wnt signaling by controlling ROS levels., Chae S, Lee HK, Lee HK, Kim YK, Jung Sim H, Ji Y, Kim C, Ismail T, Park JW, Kwon OS, Kang BS, Lee DS, Bae JS, Kim SH, Min KJ, Kyu Kwon T, Park MJ, Han JK, Kwon T, Park TJ, Lee HS, Lee HS., Sci Rep. August 21, 2017; 7 (1): 8874.                    

A Dominant Mutation in Nuclear Receptor Interacting Protein 1 Causes Urinary Tract Malformations via Dysregulation of Retinoic Acid Signaling., Vivante A, Mann N, Yonath H, Weiss AC, Getwan M, Kaminski MM, Bohnenpoll T, Teyssier C, Chen J, Shril S, van der Ven AT, Ityel H, Schmidt JM, Widmeier E, Bauer SB, Sanna-Cherchi S, Gharavi AG, Lu W, Magen D, Shukrun R, Lifton RP, Tasic V, Stanescu HC, Cavaillès V, Kleta R, Anikster Y, Dekel B, Kispert A, Lienkamp SS, Hildebrandt F., J Am Soc Nephrol. August 1, 2017; 28 (8): 2364-2376.

RARβ2 is required for vertebrate somitogenesis., Janesick A, Tang W, Nguyen TTL, Blumberg B., Development. June 1, 2017; 144 (11): 1997-2008.                                              

A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification., Rankin SA, Rankin SA, Han L, McCracken KW, Kenny AP, Anglin CT, Grigg EA, Crawford CM, Wells JM, Shannon JM, Zorn AM., Cell Rep. June 28, 2016; 16 (1): 66-78.                                              

Using frogs faces to dissect the mechanisms underlying human orofacial defects., Dickinson AJ., Semin Cell Dev Biol. March 1, 2016; 51 54-63.          

The role of folate metabolism in orofacial development and clefting., Wahl SE, Kennedy AE, Wyatt BH, Moore AD, Pridgen DE, Cherry AM, Mavila CB, Dickinson AJ., Dev Biol. September 1, 2015; 405 (1): 108-22.                                  

Zic1 controls placode progenitor formation non-cell autonomously by regulating retinoic acid production and transport., Jaurena MB, Juraver-Geslin H, Devotta A, Saint-Jeannet JP., Nat Commun. June 23, 2015; 6 7476.            

Heat shock 70-kDa protein 5 (Hspa5) is essential for pronephros formation by mediating retinoic acid signaling., Shi W, Xu G, Wang C, Wang C, Wang C, Sperber SM, Chen Y, Chen Y, Zhou Q, Deng Y, Zhao H., J Biol Chem. January 2, 2015; 290 (1): 577-89.                        

Retinoic acid induced-1 (Rai1) regulates craniofacial and brain development in Xenopus., Tahir R, Kennedy A, Elsea SH, Dickinson AJ., Mech Dev. August 1, 2014; 133 91-104.                            

Active repression by RARγ signaling is required for vertebrate axial elongation., Janesick A, Nguyen TT, Aisaki K, Igarashi K, Kitajima S, Chandraratna RA, Kanno J, Blumberg B., Development. June 1, 2014; 141 (11): 2260-70.                    

Transcriptional regulation and nuclear reprogramming: roles of nuclear actin and actin-binding proteins., Miyamoto K, Gurdon JB., Cell Mol Life Sci. September 1, 2013; 70 (18): 3289-302.        

ERF and ETV3L are retinoic acid-inducible repressors required for primary neurogenesis., Janesick A, Abbey R, Chung C, Liu S, Taketani M, Blumberg B., Development. August 1, 2013; 140 (15): 3095-106.                                                              

Chemical activation of RARβ induces post-embryonically bilateral limb duplication during Xenopus limb regeneration., Cuervo R, Chimal-Monroy J., Sci Rep. January 1, 2013; 3 1886.      

Retinoic acid homeostasis regulates meiotic entry in developing anuran gonads and in Bidder's organ through Raldh2 and Cyp26b1 proteins., Piprek RP, Pecio A, Laskowska-Kaszub K, Kloc M, Kubiak JZ, Szymura JM., Mech Dev. January 1, 2013; 130 (11-12): 613-27.            

Median facial clefts in Xenopus laevis: roles of retinoic acid signaling and homeobox genes., Kennedy AE, Dickinson AJ., Dev Biol. May 1, 2012; 365 (1): 229-40.                              

Disruption of RAB40AL function leads to Martin--Probst syndrome, a rare X-linked multisystem neurodevelopmental human disorder., Bedoyan JK, Schaibley VM, Peng W, Bai Y, Mondal K, Shetty AC, Durham M, Micucci JA, Dhiraaj A, Skidmore JM, Kaplan JB, Skinner C, Schwartz CE, Antonellis A, Zwick ME, Cavalcoli JD, Li JZ, Martin DM., J Med Genet. May 1, 2012; 49 (5): 332-40.          

RIPPLY3 is a retinoic acid-inducible repressor required for setting the borders of the pre-placodal ectoderm., Janesick A, Shiotsugu J, Taketani M, Blumberg B., Development. March 1, 2012; 139 (6): 1213-24.                        

Analyzing the function of a hox gene: an evolutionary approach., Michaut L, Jansen HJ, Bardine N, Durston AJ, Gehring WJ., Dev Growth Differ. December 1, 2011; 53 (9): 982-93.                  

Teratogenic effects of triphenyltin on embryos of amphibian (Xenopus tropicalis): a phenotypic comparison with the retinoid X and retinoic acid receptor ligands., Yu L, Zhang X, Yuan J, Cao Q, Liu J, Zhu P, Shi H., J Hazard Mater. September 15, 2011; 192 (3): 1860-8.

A role for all-trans-retinoic acid in the early steps of lymphatic vasculature development., Marino D, Dabouras V, Brändli AW, Detmar M., J Vasc Res. January 1, 2011; 48 (3): 236-51.

XPteg (Xenopus proximal tubules-expressed gene) is essential for pronephric mesoderm specification and tubulogenesis., Lee SJ, Kim S, Choi SC, Han JK., Mech Dev. January 1, 2010; 127 (1-2): 49-61.                  

Retinoid signalling is required for information transfer from mesoderm to neuroectoderm during gastrulation., Lloret-Vilaspasa F, Jansen HJ, de Roos K, Chandraratna RA, Zile MH, Stern CD, Durston AJ., Int J Dev Biol. January 1, 2010; 54 (4): 599-608.                

The target of the NSD family of histone lysine methyltransferases depends on the nature of the substrate., Li Y, Trojer P, Xu CF, Cheung P, Kuo A, Drury WJ, Qiao Q, Neubert TA, Xu RM, Gozani O, Reinberg D., J Biol Chem. December 4, 2009; 284 (49): 34283-95.              

Developmental expression of retinoic acid receptors (RARs)., Dollé P., Nucl Recept Signal. May 12, 2009; 7 e006.            

A microarray screen for direct targets of Zic1 identifies an aquaporin gene, aqp-3b, expressed in the neural folds., Cornish EJ, Hassan SM, Martin JD, Li S, Merzdorf CS., Dev Dyn. May 1, 2009; 238 (5): 1179-94.                

Retinoid signaling can repress blastula Wnt signaling and impair dorsal development in Xenopus embryo., Li S, Lou X, Wang J, Liu B, Ma L, Su Z, Ding X., Differentiation. October 1, 2008; 76 (8): 897-907.            

Arsenic as an endocrine disruptor: arsenic disrupts retinoic acid receptor-and thyroid hormone receptor-mediated gene regulation and thyroid hormone-mediated amphibian tail metamorphosis., Davey JC, Nomikos AP, Wungjiranirun M, Sherman JR, Ingram L, Batki C, Lariviere JP, Hamilton JW., Environ Health Perspect. February 1, 2008; 116 (2): 165-72.                

XRab40 and XCullin5 form a ubiquitin ligase complex essential for the noncanonical Wnt pathway., Lee RH, Iioka H, Ohashi M, Iemura S, Natsume T, Kinoshita N., EMBO J. August 8, 2007; 26 (15): 3592-606.

Exploring nervous system transcriptomes during embryogenesis and metamorphosis in Xenopus tropicalis using EST analysis., Fierro AC, Thuret R, Coen L, Perron M, Demeneix BA, Wegnez M, Gyapay G, Weissenbach J, Wincker P, Mazabraud A, Pollet N., BMC Genomics. May 16, 2007; 8 118.        

Tpt1 activates transcription of oct4 and nanog in transplanted somatic nuclei., Koziol MJ, Garrett N, Gurdon JB., Curr Biol. May 1, 2007; 17 (9): 801-7.        

Inhibition of histone deacetylase as a new mechanism of teratogenesis., Menegola E, Di Renzo F, Broccia ML, Giavini E., Birth Defects Res C Embryo Today. December 1, 2006; 78 (4): 345-53.

Retinoic acid signalling is required for specification of pronephric cell fate., Cartry J, Nichane M, Ribes V, Colas A, Riou JF, Pieler T, Dollé P, Bellefroid EJ, Umbhauer M., Dev Biol. November 1, 2006; 299 (1): 35-51.                  

Neofunctionalization in vertebrates: the example of retinoic acid receptors., Escriva H, Bertrand S, Germain P, Robinson-Rechavi M, Umbhauer M, Cartry J, Duffraisse M, Holland L, Gronemeyer H, Laudet V., PLoS Genet. July 1, 2006; 2 (7): e102.                  

Global analysis of RAR-responsive genes in the Xenopus neurula using cDNA microarrays., Arima K, Shiotsugu J, Niu R, Khandpur R, Martinez M, Shin Y, Koide T, Cho KW, Kitayama A, Ueno N, Chandraratna RA, Blumberg B., Dev Dyn. February 1, 2005; 232 (2): 414-31.                          

Spatiotemporal retinoid-X receptor activation detected in live vertebrate embryos., Luria A, Furlow JD., Proc Natl Acad Sci U S A. June 15, 2004; 101 (24): 8987-92.          

Multiple points of interaction between retinoic acid and FGF signaling during embryonic axis formation., Shiotsugu J, Katsuyama Y, Arima K, Baxter A, Koide T, Song J, Chandraratna RA, Blumberg B., Development. June 1, 2004; 131 (11): 2653-67.              

Retinoic acid receptor alpha fusion to PML affects its transcriptional and chromatin-remodeling properties., Segalla S, Rinaldi L, Kilstrup-Nielsen C, Badaracco G, Minucci S, Pelicci PG, Landsberger N., Mol Cell Biol. December 1, 2003; 23 (23): 8795-808.

Active repression by unliganded retinoid receptors in development: less is sometimes more., Weston AD, Blumberg B, Underhill TM., J Cell Biol. April 28, 2003; 161 (2): 223-8.

The germ cell nuclear factor is required for retinoic acid signaling during Xenopus development., Barreto G, Borgmeyer U, Dreyer C., Mech Dev. April 1, 2003; 120 (4): 415-28.            

Active repression of RAR signaling is required for head formation., Koide T, Downes M, Chandraratna RA, Blumberg B, Umesono K., Genes Dev. August 15, 2001; 15 (16): 2111-21.            

The putative nuclear receptor mediator TIF1alpha is tightly associated with euchromatin., Remboutsika E, Lutz Y, Gansmuller A, Vonesch JL, Losson R, Chambon P., J Cell Sci. June 1, 1999; 112 ( Pt 11) 1671-83.

The role of the 5' untranslated region of an mRNA in translation regulation during development., van der Velden AW, Thomas AA., Int J Biochem Cell Biol. January 1, 1999; 31 (1): 87-106.

Metabolism to a response pathway selective retinoid ligand during axial pattern formation., Pijnappel WW, Folkers GE, de Jonge WJ, Verdegem PJ, de Laat SW, Lugtenburg J, Hendriks HF, van der Saag PT, Durston AJ., Proc Natl Acad Sci U S A. December 22, 1998; 95 (26): 15424-9.

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