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Summary Expression Phenotypes Gene Literature (61) GO Terms (19) Nucleotides (512) Proteins (72) Interactants (1137) Wiki
XB--6258352

Papers associated with col2a1



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Common features of cartilage maturation are not conserved in an amphibian model., Nguyen JKB, Gómez-Picos P, Liu Y, Ovens K, Eames BF., Dev Dyn. November 1, 2023; 252 (11): 1375-1390.                

Time-resolved quantitative proteomic analysis of the developing Xenopus otic vesicle reveals putative congenital hearing loss candidates., Baxi AB, Nemes P, Moody SA., iScience. September 15, 2023; 26 (9): 107665.                          

Unravelling the limb regeneration mechanisms of Polypedates maculatus, a sub-tropical frog, by transcriptomics., Mahapatra C, Naik P, Swain SK, Mohapatra PP., BMC Genomics. March 16, 2023; 24 (1): 122.                                                

The CHARGE syndrome ortholog CHD-7 regulates TGF-β pathways in Caenorhabditis elegans., Jofré DM, Hoffman DK, Cervino AS, Hahn GM, Grundy M, Yun S, Amrit FRG, Stolz DB, Godoy LF, Salvatore E, Rossi FA, Ghazi A, Cirio MC, Yanowitz JL, Hochbaum D., Proc Natl Acad Sci U S A. April 12, 2022; 119 (15): e2109508119.  

Temporal and spatial transcriptomic dynamics across brain development in Xenopus laevis tadpoles., Ta AC, Huang LC, McKeown CR, Bestman JE, Van Keuren-Jensen K, Cline HT., G3 (Bethesda). January 4, 2022; 12 (1):               

Deep learning is widely applicable to phenotyping embryonic development and disease., Naert T, Çiçek Ö, Ogar P, Bürgi M, Shaidani NI, Kaminski MM, Xu Y, Grand K, Vujanovic M, Prata D, Hildebrandt F, Brox T, Ronneberger O, Voigt FF, Helmchen F, Loffing J, Horb ME, Willsey HR, Lienkamp SS., Development. November 1, 2021; 148 (21):                                                                 

Ttc30a affects tubulin modifications in a model for ciliary chondrodysplasia with polycystic kidney disease., Getwan M, Hoppmann A, Schlosser P, Grand K, Song W, Diehl R, Schroda S, Heeg F, Deutsch K, Hildebrandt F, Lausch E, Köttgen A, Lienkamp SS., Proc Natl Acad Sci U S A. September 28, 2021; 118 (39):                                                   

The Role of RNA-Binding Proteins in Vertebrate Neural Crest and Craniofacial Development., Forman TE, Dennison BJC, Fantauzzo KA., J Dev Biol. August 27, 2021; 9 (3):   

4-Octylphenol induces developmental abnormalities and interferes the differentiation of neural crest cells in Xenopus laevis embryos., Xu Y, Jang JH, Gye MC., Environ Pollut. April 1, 2021; 274 116560.  

Using Xenopus to analyze neurocristopathies like Kabuki syndrome., Schwenty-Lara J, Pauli S, Borchers A., Genesis. February 1, 2021; 59 (1-2): e23404.      

Evolutionary repression of chondrogenic genes in the vertebrate osteoblast., Nguyen JKB, Eames BF., FEBS J. October 1, 2020; 287 (20): 4354-4361.

Novel truncating mutations in CTNND1 cause a dominant craniofacial and cardiac syndrome., Alharatani R, Ververi A, Beleza-Meireles A, Ji W, Mis E, Patterson QT, Griffin JN, Bhujel N, Chang CA, Dixit A, Konstantino M, Healy C, Hannan S, Neo N, Cash A, Li D, Bhoj E, Zackai EH, Cleaver R, Baralle D, McEntagart M, Newbury-Ecob R, Scott R, Hurst JA, Au PYB, Hosey MT, Khokha M, Marciano DK, Lakhani SA, Liu KJ, Liu KJ., Hum Mol Genet. July 21, 2020; 29 (11): 1900-1921.                  

Skeletal Mineralization in Association with Type X Collagen Expression Is an Ancestral Feature for Jawed Vertebrates., Debiais-Thibaud M, Simion P, Ventéo S, Muñoz D, Marcellini S, Mazan S, Haitina T., Mol Biol Evol. October 1, 2019; 36 (10): 2265-2276.          

A chromosome-scale genome assembly and dense genetic map for Xenopus tropicalis., Mitros T, Lyons JB, Session AM, Jenkins J, Shu S, Kwon T, Lane M, Ng C, Grammer TC, Khokha MK, Grimwood J, Schmutz J, Harland RM, Rokhsar DS., Dev Biol. August 1, 2019; 452 (1): 8-20.              

Mechanistic insights from the LHX1-driven molecular network in building the embryonic head., McMahon R, Sibbritt T, Salehin N, Osteil P, Tam PPL., Dev Growth Differ. June 1, 2019; 61 (5): 327-336.

Transcriptome profiling reveals male- and female-specific gene expression pattern and novel gene candidates for the control of sex determination and gonad development in Xenopus laevis., Piprek RP, Damulewicz M, Tassan JP, Kloc M, Kubiak JZ., Dev Genes Evol. May 1, 2019; 229 (2-3): 53-72.        

ITGBL1 modulates integrin activity to promote cartilage formation and protect against arthritis., Song EK, Jeon J, Jang DG, Kim HE, Sim HJ, Kwon KY, Medina-Ruiz S, Jang HJ, Lee AR, Rho JG, Lee HS, Kim SJ, Park CY, Myung K, Kim W, Kwon T, Yang S, Park TJ., Sci Transl Med. October 10, 2018; 10 (462):   

Evolution of dental tissue mineralization: an analysis of the jawed vertebrate SPARC and SPARC-L families., Enault S, Muñoz D, Simion P, Ventéo S, Sire JY, Marcellini S, Debiais-Thibaud M., BMC Evol Biol. August 30, 2018; 18 (1): 127.            

Developmental toxicity of dibutyl phthalate and citrate ester plasticizers in Xenopus laevis embryos., Xu Y, Xu Y, Gye MC., Chemosphere. August 1, 2018; 204 523-534.

Bapx1 upregulation is associated with ectopic mandibular cartilage development in amphibians., Lukas P, Olsson L., Zoological Lett. January 1, 2018; 4 16.                

E-cigarette aerosol exposure can cause craniofacial defects in Xenopus laevis embryos and mammalian neural crest cells., Kennedy AE, Kandalam S, Olivares-Navarrete R, Dickinson AJG., PLoS One. September 8, 2017; 12 (9): e0185729.                      

Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing., Popov IK, Kwon T, Crossman DK, Crowley MR, Wallingford JB, Chang C., Dev Biol. June 15, 2017; 426 (2): 429-441.                    

WNT16 antagonises excessive canonical WNT activation and protects cartilage in osteoarthritis., Nalesso G, Thomas BL, Sherwood JC, Yu J, Addimanda O, Eldridge SE, Thorup AS, Dale L, Schett G, Zwerina J, Eltawil N, Pitzalis C, Dell'Accio F., Ann Rheum Dis. January 1, 2017; 76 (1): 218-226.              

Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development., Owens ND, Blitz IL, Lane MA, Patrushev I, Overton JD, Gilchrist MJ, Cho KW, Khokha MK., Cell Rep. January 26, 2016; 14 (3): 632-47.                                                  

RNA-Seq and microarray analysis of the Xenopus inner ear transcriptome discloses orthologous OMIM(®) genes for hereditary disorders of hearing and balance., Ramírez-Gordillo D, Powers TR, van Velkinburgh JC, Trujillo-Provencio C, Schilkey F, Serrano EE., BMC Res Notes. November 18, 2015; 8 691.      

Molecular footprinting of skeletal tissues in the catshark Scyliorhinus canicula and the clawed frog Xenopus tropicalis identifies conserved and derived features of vertebrate calcification., Enault S, Muñoz DN, Silva WT, Borday-Birraux V, Bonade M, Oulion S, Ventéo S, Marcellini S, Debiais-Thibaud M., Front Genet. September 15, 2015; 6 283.              

Paraxis is required for somite morphogenesis and differentiation in Xenopus laevis., Sánchez RS, Sánchez SS., Dev Dyn. August 1, 2015; 244 (8): 973-87.                              

Comparative Analysis of Cartilage Marker Gene Expression Patterns during Axolotl and Xenopus Limb Regeneration., Mitogawa K, Makanae A, Satoh A, Satoh A., PLoS One. July 16, 2015; 10 (7): e0133375.                  

Evolutionary origins of C-terminal (GPP)n 3-hydroxyproline formation in vertebrate tendon collagen., Hudson DM, Werther R, Weis M, Wu JJ, Eyre DR., PLoS One. January 1, 2014; 9 (4): e93467.          

Left-right patterning in Xenopus conjoined twin embryos requires serotonin signaling and gap junctions., Vandenberg LN, Blackiston DJ, Rea AC, Dore TM, Levin M., Int J Dev Biol. January 1, 2014; 58 (10-12): 799-809.                

Germline Transgenic Methods for Tracking Cells and Testing Gene Function during Regeneration in the Axolotl., Khattak S, Schuez M, Richter T, Knapp D, Haigo SL, Sandoval-Guzmán T, Hradlikova K, Duemmler A, Kerney R, Tanaka EM., Stem Cell Reports. June 4, 2013; 1 (1): 90-103.            

Cartilage on the move: cartilage lineage tracing during tadpole metamorphosis., Kerney RR, Brittain AL, Hall BK, Buchholz DR., Dev Growth Differ. October 1, 2012; 54 (8): 739-52.                      

Thyroid hormone-dependent development in Xenopus laevis: a sensitive screen of thyroid hormone signaling disruption by municipal wastewater treatment plant effluent., Searcy BT, Beckstrom-Sternberg SM, Beckstrom-Sternberg JS, Stafford P, Schwendiman AL, Soto-Pena J, Owen MC, Ramirez C, Phillips J, Veldhoen N, Helbing CC, Propper CR., Gen Comp Endocrinol. May 1, 2012; 176 (3): 481-92.

Median facial clefts in Xenopus laevis: roles of retinoic acid signaling and homeobox genes., Kennedy AE, Dickinson AJ., Dev Biol. May 1, 2012; 365 (1): 229-40.                              

Insights on the evolution of prolyl 3-hydroxylation sites from comparative analysis of chicken and Xenopus fibrillar collagens., Hudson DM, Weis M, Eyre DR., PLoS One. May 3, 2011; 6 (5): e19336.        

WNT-3A modulates articular chondrocyte phenotype by activating both canonical and noncanonical pathways., Nalesso G, Sherwood J, Bertrand J, Pap T, Ramachandran M, De Bari C, Pitzalis C, Dell'accio F., J Cell Biol. May 2, 2011; 193 (3): 551-64.              

Regulatory elements of Xenopus col2a1 drive cartilaginous gene expression in transgenic frogs., Kerney R, Hall BK, Hanken J., Int J Dev Biol. January 1, 2010; 54 (1): 141-50.      

Early cranial patterning in the direct-developing frog Eleutherodactylus coqui revealed through gene expression., Kerney R, Gross JB, Hanken J., Evol Dev. January 1, 2010; 12 (4): 373-82.

Red fluorescent Xenopus laevis: a new tool for grafting analysis., Waldner C, Roose M, Ryffel GU., BMC Dev Biol. January 28, 2009; 9 37.          

Sox9 is required for invagination of the otic placode in mice., Barrionuevo F, Naumann A, Bagheri-Fam S, Speth V, Taketo MM, Scherer G, Neubüser A., Dev Biol. May 1, 2008; 317 (1): 213-24.          

Gene expression reveals unique skeletal patterning in the limb of the direct-developing frog, Eleutherodactylus coqui., Kerney R, Hanken J., Evol Dev. January 1, 2008; 10 (4): 439-48.

Runx2 is essential for larval hyobranchial cartilage formation in Xenopus laevis., Kerney R, Gross JB, Hanken J., Dev Dyn. June 1, 2007; 236 (6): 1650-62.                  

Twisted gastrulation modulates bone morphogenetic protein-induced collagen II and X expression in chondrocytes in vitro and in vivo., Schmidl M, Adam N, Surmann-Schmitt C, Hattori T, Stock M, Dietz U, de Crombrugghe B, Pöschl E, von der Mark K., J Biol Chem. October 20, 2006; 281 (42): 31790-800.

FGF8 spliceforms mediate early mesoderm and posterior neural tissue formation in Xenopus., Fletcher RB, Baker JC, Harland RM., Development. May 1, 2006; 133 (9): 1703-14.            

Members of the lysyl oxidase family are expressed during the development of the frog Xenopus laevis., Geach TJ, Dale L., Differentiation. October 1, 2005; 73 (8): 414-24.                      

Joint development in Xenopus laevis and induction of segmentations in regenerating froglet limb (spike)., Satoh A, Suzuki M, Amano T, Tamura K, Tamura K, Ide H., Dev Dyn. August 1, 2005; 233 (4): 1444-53.              

JNK and ROKalpha function in the noncanonical Wnt/RhoA signaling pathway to regulate Xenopus convergent extension movements., Kim GH, Han JK., Dev Dyn. April 1, 2005; 232 (4): 958-68.  

Expression profile of Xenopus banded hedgehog, a homolog of mouse Indian hedgehog, is related to the late development of endochondral ossification in Xenopus laevis., Moriishi T, Shibata Y, Tsukazaki T, Yamaguchi A., Biochem Biophys Res Commun. March 25, 2005; 328 (4): 867-73.

Cross-regulation of Wnt signaling and cell adhesion., Schambony A, Kunz M, Gradl D., Differentiation. September 1, 2004; 72 (7): 307-18.

Amphibian in vitro heart induction: a simple and reliable model for the study of vertebrate cardiac development., Ariizumi T, Kinoshita M, Yokota C, Takano K, Fukuda K, Moriyama N, Malacinski GM, Asashima M., Int J Dev Biol. September 1, 2003; 47 (6): 405-10.      

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