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XB-GENEPAGE-495334
sox17b.2 SRY (sex determining region Y)-box 17 beta, gene 2
Anatomical Phenotypes
Phenotypes manually curated with terms from the Xenopus phenotype ontology
covering anatomical, gene ontology, and neurobehavioral phenotypes.
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| abnormally ventralized embryo (5 sources), obsolete duplicated anterior-posterior axis (5 sources), abnormal bending of anterior-posterior axis (1 source), absent head (1 source), absent neural tube (1 source), absent notochord (1 source), absent somite (1 source), absent tail (1 source), decreased size of the anterior-posterior axis (1 source), increased size of the endoderm (1 source) |
| Expression Phenotypes
Gene expression phenotype annotations where the gene of interest has been
disrupted (manipulated) or is the gene assayed (assayed). Computed annotations are derived from
differential expression analysis from Xenbase processed GEO data with the criteria of a TPM >= 1,
FDR <= 0.05 and an absolute LogFC >= 2.
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| Manual annotations: sox17b.2 manipulated (8 sources), sox17b.2 assayed (6 sources) |
| Computed annotations: sox17b.2 manipulated (6 sources), sox17b.2 assayed (5 sources) |
| Experiments (Reagents)
These are short form descriptions of experiments using reagents targeting
the gene of interest.
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| Xtr Wt + sox17a MO + sox17b.1/b.2 MO (13 sources), Xla Wt + sox17b.2 (3 sources), Xla Wt + sox17b.2 (2 sources), Xla Wt + sox17b.2 (2 sources), Xla Wt + ctnnb1 + sox17b.2 (1 source), Xla Wt + ctnnb1tm1 + sox17b.2 (1 source), Xla Wt + ctnnb1tm1 + sox17b.2 (1 source), Xla Wt + ctnnb1tm1 + sox17b.2 + animal cap explant (1 source), Xla Wt + sia1 + sox17b.2 (1 source), Xla Wt + sox17b.2 + animal cap explant (1 source), Xla Wt + sox17b.2 + tcf3 (1 source), Xla Wt + sox17b.2 + wnt8a (1 source), Xla Wt + sox17b.2 + cagdf1 (1 source), Xla Wt + sox17b.2 + dnbmpr1a (1 source) |