tdgf1 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (37)

Interactants (83)

XB-GENEPAGE-482447

Gene Symbol: tdgf1 [provisional] Gene Name: teratocarcinoma-derived growth factor 1 [provisional] Synonyms: Cripto-1, cr1, xcr1, cripto, frl1, frl-1 Add Xenopus synonyms Gene Function: EGF-like growth factor Interactants: nodal(21) , egf(15) , ptpn11(15) , acvr1b(8) , smad2(7) , chrd(6) , acvr2b(4) View All

XB-GENE-482448

XB-GENE-6067836

Molecules		tropicalis	laevis
Gene		JGI XT Genome 4.1 Ensembl
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001078927\|Xenopus (Silurana) tropicalis cripto, FRL-1, cryptic family 1 (cfc1), mRNA GCAACTAAGCAGAGGCTAATTTAGTTCACTTGGTCTGTGGACTGACCACTTTACCTGGCTTTAGCTACAGATACATTAATTAAGAACTATAAGTGGGAAACTAGGGCCTTTGCAGACAACAATGCAGCTTTTAAGATTTCTTGCCATCCTTGTTTTCTCTGCTAAATATTTTATCAAGCATTGCAAAGGTGAATCCTGCGTAGGACTGTACTGTAATGATACCGGTTTATCGCTGGCAATTAAGAGCAACACAATCCATCAGATCTTGCAGGATACAATAAATGCCACACATGGAAAGAGTCCAGAAAAATCTGCTAAGACCTTGCCCTTCTTGGGTATCACAGACAGCAAGAAGTTAAACAAAAAATGCTGTCAGAATGGAGGCACTTGTTTCTTGGGGACTTTTTGCATCTGCCCTAAGCAATTTACTGGTCGGCACTGTGAACATGAAAGGCGCCCAGCAAGCTGCGCCGGTGTTCCCCATGGAGACTGGATCCGTCAGGGCTGCTTGCTGTGTCGATGTGTGTCTGGTGTCCTGCACTGCTTTACTCCTGAGTCTGAGGACTGTGGTCCAGTGCATGAAAAAAATATGAGATCGGGTGTCCCAAGAACGCAACTCAGTTTATTCATCTATTACTTATTTATTGCAAACTTGTTTTATCACATAGTTTGGCATTTGAATATTGGACTTTAGCTGAGTAACTAGAGTCTGCTAGTTCAGTCCAGATCAGGCTTCTGTTTCTATACTGCACTTTTAATTGCTAAACCCATTTTGCCAGGATTATGCTTAGAATTATATTGCTACCCCCAGAATCCGGAAAATATTCACAAGCTATAGAATGTCTTATATTCAGTGCTGATGTCTAGGGGTCAGAATGGGTTTGCAGTACTTCCGAGCACTGGAGTTGGTTTAAGATATAGCTGCTGGGCTCTTGCTCCTTGCTGTAAATTTCAGATCAGGGACTTAGCCTTATACTTACCCAGTGCATTCTGTATATATGTAAATTTTATTAATTTATTAATCAGACAAGTTGTACCTTAACAATGTCCTTCACTCACTTTTTTTTTTTATATATATATATCACAATGATTTTATTTTTTACTTTTTTCTTAACTGACAAAGAGAAAAAAATCTCTAGGAACATAATATACAGATATTGTCCTACTACATAAATGTCACATTGCATGTTATGGTACTTGTATGTTTGTCTTGACCTACAACAATGTGTCCCTAGCCATGAAACCCTAGAGATTTGTTTTTATGTGAAACCAAATGGGCCACAATAGTGCTTAAACAAAAAAAAATGTAAAATTGGTTGTTTAGAAGATGAGTCAATGCATCCTATAATTTCAGTTTTAGGGTACAGGCATTTAGTTATAGGTCAGGAGATAATACAATTACCCGTGTTGCTGTACCTATGTACTTACAGTTTGTCCACTTGATGTTTGCAATGAAACATTAAATACGTAAAAGAAAAAAAAAAAAAAAAAA	Refseq >NM_001088462\|Xenopus laevis cripto-1a (cr1a), mRNA CCGACCGTTACACCTGGTTTTTGCTAAGGACACATTCAATACAAGAACTAAAAGTGGGAAACTGGGGCCTTTGCAGAAAACAATGCAGTTTTTAAGATTTCTTGCCATCCTTATTTTCTCTGCTAAACATTTTATCAAGCATTGCAAAGGTGAAACTTGCATGGGACTGAACTGTAATGACCCAAGGTTATTGGAGGCAATTAAGAGCAACACAATCAATCAGCTCTTGCATGATACAATTAATGCCACCCATGGAAAGAGTCCACCAAAATCCACTAAAACCTTGCCCTTCTTGGGTATCACAGACAGTAAGAAATTGAATAGAAAATGCTGTCAGAATGGAGGCACTTGTTTCTTGGGGACCTTTTGCATCTGCCCTAAGCAATTTACTGGTCGGCACTGTGAACATGAAAGGAGGCCAGCAAGCTGCTCCGGTGTTCCCCATGGAGACTGGATCCGTCAGGGCTGCTTGCTGTGTAGATGTGTGTCTGGTGTCCTACACTGCTTCAAGCCCGAGTCTGAGGACTGTGATGTTGTGCATGAAAAAAACATGAGATCGGGGGTCCCGAGAATGCAGCTCAGCTTAATCATCTATTGCTTCCTTACTGCAAACTTGTTTTACCACATAGTTTGGCATCTGAATATTGGACTTTAACAGAGTAACTTGAGTCTGCCAGTCAGGTTCAGATTGCAGACGTCTGTGTCTACACTGCACTTTCAATTTGTGAACCCATTTTGCCAGGATTATGCTTGAAGTATATGGCTATCTTCCACCCCTGGAATCCTGGAAAATATGCAGAAACTATACAATGCCTTATTTCTATTGGTTGTTTCATAAAATAACTTTTTTTATAGGATGATGTGTATAGTGGCCAGAATGGGTTTACAGTACTTCCAAGCACTGGCGTTGGTTCAAAATAGCTACTGGGTTCTTGCTCTTTGCTGCATGTTGAGATCAGGAAGCTAGTCTTATACTTACCCAGTGCATTCTGTATATATGTAAATTTTATTAACTTATTAGACACGTTGTACATTAACAGCATCCTTCACAAACTTTTATTTTTTTTTAATTTTTTTATTAATTGACAAAGAGAACAAAGTATCTAGGAACATTTTACAAATATTGTCCTACTACATTGCATGTTGTGGTTCTTGTTTGTATGTTTGTCCTGATCTTCTACAATGTATCCCTAGCCATAAAACGATTTTGTGAGTGTGTGTGTGTGACTGCATCCCATTTTATTCATTATGCAAACACTTTGCAAATGATTGTGCAGCAATGTAAGTGCTAGCCTGTGGTCAACAGTGCTGAATGTAAATCTTGGAGCGGTGATATCAGCATGCTTATGGAGGCTCAATAACCTTGGTCTTGCCCCTTTAAATTCTATTTTTCTACGGGCAAGTAAATCTAAACTGGTAAAGTACCTTCTTTTAAGGAAATGAATCACTGAATGTTATAATTCCAGTTTCAGGCCACAGACAATTAATGACAGCTCAGGGAATAATACAATTGCCCATGTTTGATGCACCTAATGTACTGTATGTATTACAGGGTGTCTGCTTGATGTTTGCAATGAAGACATTAAATACTGTACCTAAAAGAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001072395\|cripto, FRL-1, cryptic family 1 [Xenopus (Silurana) tropicalis] MQLLRFLAILVFSAKYFIKHCKGESCVGLYCNDTGLSLAIKSNTIHQILQDTINATHGKSPEKSAKTLPFLGITDSKKLNKKCCQNGGTCFLGTFCICPKQFTGRHCEHERRPASCAGVPHGDWIRQGCLLCRCVSGVLHCFTPESEDCGPVHEKNMRSGVPRTQLSLFIYYLFIANLFYHIVWHLNIGL	Refseq >NP_001081931\|teratocarcinoma-derived growth factor 1 [Xenopus laevis] MQFLRFLAILIFSAKHFIKHCKGETCMGLNCNDPRLLEAIKSNTINQLLHDTINATHGKSPPKSTKTLPFLGITDSKKLNRKCCQNGGTCFLGTFCICPKQFTGRHCEHERRPASCSGVPHGDWIRQGCLLCRCVSGVLHCFKPESEDCDVVHEKNMRSGVPRMQLSLIIYCFLTANLFYHIVWHLNIGL

Genomic

tropicalis

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Synteny

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Expression		tropicalis	laevis
UniGene		Str.6258	Xl.1289
Gurdon EST/FL		CABI9841	IMAGE:6639072
Affymetrix 1.0		Str.6258.1.S1_at	Xl.1289.1.S1_at
GEO data			GEO

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene	TDGF1
mouse		MGI	Tdgf1	All(5) Targeted, knock Out(2) Targeted, other(3)
zebrafish

Publications
First:		Translation of the human C3b/C4b receptor mRNA in a cell-free system and by Xenopus oocytes. [Biochemistry 1989]
Most recent:		Molecular cloning and characterization of the germ cell-related nuclear orphan receptor in chickens. [Mol Reprod Dev 2010]
		View All Papers 5 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:
Biological:
Cellular Component:
EC:
KOG:		[T] Fibrillins and related proteins containing Ca2+-binding EGF-like domains

Suppliers		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice	geneservice
		RZPD imagenes	RZPD imagenes

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