neurog2 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (69)

Nucleotides (79)

Interactants (215)

XB-GENEPAGE-491039

Gene Symbol: neurog2 Gene Name: neurogenin 2 Synonyms: X-ngnr-1, neurogenin-related-1, Ngnr1, XNgnr1, ngn2, atoh4, Ngnr-1, neurogenin-2, ngn-2, Xngnr-1, xngn2, neurogenin 2 Add Xenopus synonyms Gene Function: basic helix-loop-helix transcription factor Interactants: tubb2b(39) , neurod1(31) , notch1(25) , neurog1(20) , dll1(18) , sox2(16) , myt1(11) View All

XB-GENE-491040

XB-GENE-6077660

XB-GENE-6252035

Molecules		tropicalis	laevis a		laevis b
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene		Entrez Gene
mRNA		NCBI Nucleotide >XM_002934243\|PREDICTED: Xenopus (Silurana) tropicalis hypothetical protein LOC100493110 (LOC100493110), mRNA ACGTACAGCCACTGAATCGCAAGCCGCATCACTTGAGCTGGAGAGCAGGACGCGTGTCAGAACGCACTTCCACTCATACACACTGTGCGACGGGCTGCCAGTCGCACCCACACCGACTCCTACTGTGCGAAAGACTCCTGAGACACAAGTAAAGCCGGGAATCCCCCTCGTACTACGGGACTAAGAGAATATCCCTACAGCCAACAGCGCTGGAACCCCACTCACCTGCTTCAGGAGCCAACAGCCAGGGCAAAAAGATGGTGCTGCTGAAGTGCGAGTACCGCGATGAAGAGGAGGAACTGACCTCTGCCTCCCCCTGCTCCATGTCTTCCTCCCACATGTCCCCGGCACAGACGTGCAGCTCCGACGACGAGCAACTCCTGAGCCCGACAAGCCCAGCGCTAATGCACCTGCAGGCACAGGAGCAAGAGAACAGCCCGCCATCTAGAAGGAGCCGACCCCGCACCAAGAACGGAGAGACCGTGTTGAAGGTGAAGAAGACCCGGCGCATTAAAGCCAACAACCGGGAAAGAAATCGCATGCATCACCTAAACTCGGCGCTCGATTCCCTGAGGGAAGTACTGCCATCATTACCCGAAGATGCCAAGCTCACCAAGATAGAGACCTTGCGCTTTGCATACAACTACATCTGGGCTCTTAGCGAGACTTTGCGCCTGGCAGAACACGGATCTTCTGCTTCCACCCTATCACCCATGTCGGTGCAGGACTCCTCTCCATCCCAGAGCCCATCCTGGAGCTGCAGCTCTTCCCCCTCTTCCTCTTGTGGCTCCTTCTCCCCGGCCAGCCCTGCCAGCTCCACCTCAGACATGCTGGAGTACTGGCAACCTGCTGAGCATCGAATGAACCCCTTCATGCCTGCCAGTGGGGCTTTCATTTGAACTCAGAGAACTATGTTGGATTCTAGAATTCAGAGTATAAATTCCACTTGAGTTCTTGCTTACAATTCTAGCCATCAGGGACAAGCATAGCAGGGGTTAAATATCAGGTTTACCTCAGTGGGGCCCCAGAGCAAACAATTATTTTCCTGGGCCCCATAATATCCTCTGACCCTGCTTTCCCAGCGTGAGCCCATATAGTGCAATAATATAATCCTGCAATGGCCACTGCTGTGACCACATTGCACTCTGTGGGTTCTGCTGCTGACTGTGAAGGGAGAGAAGTGTGTGGCCTGTGCCTGCTGGGTTTCTGGTGCCTACAGCGTATGTTCCCCCTATAGTTGTGCCCATGGCAGGGCCACTTTAGGGTGGGATACATTGCTGTGTCTGTTATTTTTATTAGTGTGAAATGA	Refseq >NM_001088333\|Xenopus laevis neurogenin 2 (neurog2-a), mRNA GCGTGTCACACGGCAGTTGCACTCATAATACACTGTGAGCTGACAGTCGCAACCACGCCCGACAGGGAACACGCAGCAAGTCTACTGCACGACTATAACCCGACGACTCGACCCAACTCACCTGCTGCTTCAGGGGCCAAACACCAAGTTATAAAGTAAGTAACTTCCATTGCAACTGCAGCATTGTCACTTGCGACAGCGCATGAAGTAGTGAGAGGCACAGACCATGTACATATATGGGGTTTGTGGTTATTATAGTAAGTGGGATGATGTTTGGGTTATTATAGTAAGTGGATGTGAAGTTGTCAGTGCAACATTGGGGCTAACCATTGGCTGTGTGTTTGCGCTTGTCTAGGATGGTGCTGCTCAAGTGCGAGTACCGCGATGAAGAGGAGGACCTGACCTCTGCCTCCCCCTGCTCCGTGACCTCCTCTTTCCGTTCCCCGGCGACGCAGACGTGCAGCTCGGACGATGAGCAGCTCCTGAGTCCCACCAGCCCGGGACAGCACCAGGGGGAAGAGAACAGCCCGCGATGCAGGAGGAGCCGAGGCCGCGCTCAGGGCAAGAGCGGAGAAACTGTGTTAAAGATCAAGAAGACCCGGCGCGTTAAAGCTAACAACCGGGAAAGGAATCGCATGCACAACCTGAACTCTGCGCTTGATTCCCTCAGGGAAGTGTTGCCCTCTTTACCTGAAGATGCCAAACTCACCAAGATAGAGACCTTGCGCTTTGCCTACAACTACATCTGGGCTCTTAGCGAAACTTTGCGCCTTGGCGACCCAGTGCACCGATCTGCTTCCACCCCAGCAGCAGCCATATTGGTGCAGGACTCCTCTTCATCCCAGAGCCCCTCCTGGAGCTGCAGCTCGTCCCCTTCTTCCTCTTGTTGCTCCTTCTCCCCGGCCAGCCCTGCCAGCTCCACCTCGGACAGTATTGAGTCCTGGCAGCCCTCTGAGCTCCACCTGAACCCCTTCATGTCTGCCAGCAGCGCTTTCATTTGAACTCCTGTTGGACTATGATGGATTCTCACACTTCCAATTGCTACATATGAAGAATACCTCAGTGGGGCCCCAGTGCAAATGATTTTCCTGGGAACCCAGTTTATTGAGCATGAGCCCATATAGTGTAATAATATCATCCTGCAGTGACCAAATTGCACTCTGTGGGTTCTGCTGATGGGGAGAAGTGGGGGGCTTGATCCCCCTGAGTTTGTGCTTACCTGTATAGCATTTACTCCCCCTGCTGTCATGCCCCTGGCATATGATGGAGTACATTGCTGGGTCTATTTTATTATCAGCAATGTGAACTGAAA		Refseq >NM_001088335\|Xenopus laevis neurogenin 2 (neurog2-b), mRNA CGAGTGCGCAACACTTGAGCTGGAGTGCGGGGCGCGTGTCACACACACACTGAACTGCCACTGACACCAGAGACACAGCGAGTGGGAACCCCCTGCTACTACAGGACTAGGAGAAAAGCCGCACAGCCTGCAGCGCCGCAACCCGACTCACCTGCTGCTCCCGGAGCCACAAGCCTGGCGCACAAGATGGTGCTGCTGAAGTGCGAATACCGCGATGAGGTGTCGGAACTGACCTCTGTCTCCCCCTGCTCCGTGTCCTCCTCCTCTTCACACCCGTCCCCGGCGATGCAGACGTGCAGCTCGGACGATGAGCAGCTACACAGTCCGACAAGCCCGACGCTCACGCACCTGCAGCAGGGACGGGACCAGGGGGAGGAGAACAGCCCGCGATGCAGGAGGAGCCGAGCCCGCGGAGACACCGTGCTGAAGATCAAGAAGACCCGGCGCGTTAAAGCCAATAACCGCGAGAGGAATCGCATGCACCACCTGAACTATGCGCTCGATTCTCTGAGGGAGGTTCTACCGTCATTACCCGAAGACGCCAAACTCACCAAGATAGAGACCTTGCGCTTTGCCCACAACTACATCTGGGCTCTTAGCGAAACTTTGCGCCTGGCCGACCAGCTGCACGGATCTACTTCCACCCCAGCAGCAGCCATATTGGTACAGGACTCCTATCCTTCCCTGAGCCCCTCCTGGAGCTGCAGCTCGTCCCCATCCTCCAACTCTTGCGACTCCTTCTCCCCGACCAGCCCTGCCAGCTCCACCTCGGACAGTATTGAGTACTGGCAGCCCTCTGAGCTCCGCTTGAACCCCTTCATGTCTGCCCTTTGAACGCACAGGACTATGGGTGATTTTAACTTTTTACACTTTAAATTCCTGCTTCCCATAAGGGTCAAGTACTGCAGGGGTTACATATCAAGTTTACCTCAGGGGGGGCCACAGCAAATTCTTTTCCTGGGCCCTAAAATGTCCTCTGAATTTGAGCCCATATAGTGCAATGGTATAACCCTGCAATGGTATAATCCAGCAATGGTATAATCCTGCATCGTTACCTAATTGTACTTTGTGGGGTCTGCTGATGGGGGACAAGTGTTTGACCTGTGTCCAGAGTTTCACATTTACTCCCCCTTTTGGTATATCTCTGGCCGCAACACTTGCTGTGTCTGTTTCATCGTTAGCTATGTGTATTAGGAAACTGTCTATCCCTCATCTGCACCTGTTAGACTACAGCTACCAACTTCCTGTTACCAGGGGGCTACTGGGTAATGTACTTC
Protein		NCBI Protein >XP_002934289\|PREDICTED: hypothetical protein LOC100493110 [Xenopus (Silurana) tropicalis] MVLLKCEYRDEEEELTSASPCSMSSSHMSPAQTCSSDDEQLLSPTSPALMHLQAQEQENSPPSRRSRPRTKNGETVLKVKKTRRIKANNRERNRMHHLNSALDSLREVLPSLPEDAKLTKIETLRFAYNYIWALSETLRLAEHGSSASTLSPMSVQDSSPSQSPSWSCSSSPSSSCGSFSPASPASSTSDMLEYWQPAEHRMNPFMPASGAFI	Refseq >NP_001081802\|neurogenin 2 [Xenopus laevis] MVLLKCEYRDEEEDLTSASPCSVTSSFRSPATQTCSSDDEQLLSPTSPGQHQGEENSPRCRRSRGRAQGKSGETVLKIKKTRRVKANNRERNRMHNLNSALDSLREVLPSLPEDAKLTKIETLRFAYNYIWALSETLRLGDPVHRSASTPAAAILVQDSSSSQSPSWSCSSSPSSSCCSFSPASPASSTSDSIESWQPSELHLNPFMSASSAFI		Refseq >NP_001081804\|neurogenin 2 [Xenopus laevis] MVLLKCEYRDEVSELTSVSPCSVSSSSSHPSPAMQTCSSDDEQLHSPTSPTLTHLQQGRDQGEENSPRCRRSRARGDTVLKIKKTRRVKANNRERNRMHHLNYALDSLREVLPSLPEDAKLTKIETLRFAHNYIWALSETLRLADQLHGSTSTPAAAILVQDSYPSLSPSWSCSSSPSSNSCDSFSPTSPASSTSDSIEYWQPSELRLNPFMSAL

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis a		laevis b
UniGene		Str.45498 [+] Str.59144	Xl.369		Xl.370
Unigene EST Profile		EST Profile	EST Profile		EST Profile
GEO data			GEO		GEO
Images		40 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	NEUROG2
mouse		MGI	Neurog2	All(8) Targeted, knock Out(2) Targeted, other(5)
zebrafish

Publications
First:		neurogenins, a novel family of atonal-related bHLH transcription factors, are putative mammalian neuronal determination genes that reveal progenitor cell heterogeneity in the developing CNS and PNS. [Mol Cell Neurosci 1996]
Most recent:		Non-canonical ubiquitylation of the proneural protein Ngn2 occurs in both Xenopus embryos and mammalian cells. [Biochem Biophys Res Commun 2013]
		View All Papers 19 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:
Biological:
Cellular Component:
EC:
KOG:		[K] Transcription factor HAND2/Transcription factor TAL1/TAL2/LYL1

Reagents		tropicalis	laevis a		laevis b
Clones			EXRC - 1 clone(s)
		open biosystems	open biosystems		open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes		geneservice/RZPD imagenes
Affymetrix 1.0		Str.45498.1.A1_at [+] Str.39845.1.S1_at	Xl.369.1.S1_at		Xl.370.1.S2_at [+] Xl.370.1.S1_at
Affymetrix 2.0			Xl2.369.1.S1_at [+] Xl2.53742.1.A1_at		Xl2.370.1.S1_at [+] Xl2.370.1.S2_at

Symbol legend[+]