dlx3 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (16)

Interactants (84)

XB-GENEPAGE-5879292

Gene Symbol: dlx3 [provisional] Gene Name: distal-less homeobox 3 [provisional] Synonyms: xdlx3, ai4, tdo Add Xenopus synonyms Gene Function: homeodomain and LIM zinc binding domain transcription factor Interactants: chrd(8) , msx1(5) , sox2(5) , bmp4(4) , snai2(4) , sox9(4) , dlx5(3) View All

XB-GENE-5879293

XB-GENE-6254455

XB-GENE-5879348

Molecules		tropicalis	laevis a		laevis b
Gene		JGI XT Genome 4.1 Ensembl
		Entrez Gene	Entrez Gene		Entrez Gene
mRNA		Refseq >NM_001030395\|Xenopus (Silurana) tropicalis distal-less homeobox 3 (dlx3), mRNA GTCTGATTAATTTCCAGGGAGCTCTCTTCTCCGGCTCTACAAACCATGAGCGGGTCCTATGAAAAGAAGATGGCAGTGTTGACCGACCTGACCACTTCTTGTCATCCTGTGACCAAGGACTCTCCCACCCTGCCAGAGTCAACCGCCACGGATATGGGCTATTATAGCGGTCACCTCTCTGGTGGGCAGCACGACTTCTTCCAGACTCAAGCGTACTCCCCATCTATCAGCAGCTATGGCTACCACCACCCCCACCATCAGTACAACTTTAATGGGCTAGTAGGGAACGAGAGCTTTCTGCCCAAGGATGACTATCAGTATGGAGGGGGATATCGGGCGTTTGGGCATTACAGAGAGCCTCCAGTGCCGGAGACAGTTTCAGTGAAGGAAGAGCCAGAAACCGAAGTTCGGATGGTTAATGGGAAACCTAAAAAGATCCGAAAGCCAAGAACCATCTATTCTAGTTACCAGCTGGCTGCATTGCAGAGAAGGTTCCAGAAGGCCCAATATTTGGCACTGCCCGAGAGAGCAGAACTAGCCGCCCAGTTAGGGCTCACTCAAACGCAGGTAAAAATTTGGTTCCAGAACCGAAGATCTAAGTTTAAAAAACTGTACAAAACCGGAGAAGGGCCTGGTTTGGAACACAGTCCGAATAACAGCGACTCCATGGCTTGCAATTCCCCTTCATCCCCACCCGTATGGGACAATAGTCGAAGCCGAACCCCTCAGCAGCAGCAGCAGCAAAGTCTTCCACCGTGCTCTTCACCCTCTTATATGGAGAACTACCATCCGTGGTACACCCAGCAAACCCAACCTGGCCAGCACCTACAACCATCTGAAGTTATGCATCAACCTCCTTCCAATACAGTGTATTAAGTGAAAAAAGACACTGGCACTAATTTATCTTTGTGCCCTCCTGTATTTTATTTTTATTTTTTTTGGAATTTGATGACAGTCAAAAAGTTTGAAAAACAATGTCAGCTCAAGGTCAAACCGATAATTAGGTGCATTTTATACACAGCACCTAAAGAATTGCTTGATCCCTCAGGCTGAGTGGTTTGGATGGACAATATTTTGGAGATTATCCATTATTTTGGATGCCACTATACGTCAGTCTTTCTCGAACCTTGGATTCTCGAACCTTGTGTTGGGCCTCTTAATTTATCATTAATGAAAGTGACATTAATGTAATGTTCTAAAGTATAGATTCTCATTCTTTTATGCCTCTCCTGACAACCATGGTTTAAATACTGCAATAGCTGAATTAAAACTCTAAAGGTGTTATTTTTAAGACCCTTTCCTGGACTTGTTGCTGTTTGACCAATGTGATATTCTGTGCCTTAGTAAATGAAGCTATATTTAAATAATAGATCCATTTTTACGTTTTATAAGGGACAAGAAGCAAAATATTCCATAACTCTACTGAATCGAGATACAAAGACTTGTAGAGTTGATTCTGCCTGGGACTGTAAGATGTGGCTGCATCTCAGTGGCCTCACCAGCTTCCATAAAGGAACATCGAATGGTCAAAGGGTCCCGAATTCAGTGTCACTCCATGGTGGAACGGACTTCTTTCCAGAGCTGCTGTTTGTGTAACTTGGTCACGTTCCTGTGTCATGGAAATATTTAAAACAAAAACAAAACAAAAAAAAGACTATGGTTGGCCTTAACTTATTTTTGTAATATTTTTGGGGGGTTGTGTTTGGAATGGGAGGAGAAGATGATGAGAACTAACTTTGATTAGAAGATGGGGGGGGGGGGGGGTGTTAAAGAATGTTATGGTGTGAATGCAAATAAATTTTTATGGTATTTTGCTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	NCBI Nucleotide >L09730\|Xenopus laevis putative transcription factor DLL2 mRNA, 3' end GGGGCCGTGTTGACCGACCTGACGACCTCGTGCCACCCTGTGACCAAGGACTCGCCCACCCTGCCCGAGTCCAGCGCCACCGATATGGGCTACTATAGTGGCCACCTCTCTGCCGGCCAACATGACTTCTTCCCCACTCAGACTTACTCCCCTTCCATCAGCAGCTACGGCTACCCCCACCCCCAGTACAACTTCAATGGGCTTGTGGGCAACGAGGGCTACTTGTCCAAGGACGACTATCAGTATGGAGCCGGGTACCGGCCGTTTGCTCATTACAGAGAACCCCCAGTGCAGGAGACAGTATCAGTGAAGGAAGAGCCAGAAACAGAAGTCCGGATGGTTAATGGGAAACCTAAAAAGATCCGGAAGCCAAGAACCATCTATTCTAGTTACCAGCTGGCCGCTTTGCAGAGAAGGTTCCAGAAGGCCCAATATTTGGCTCTGCCCGAGAGAGCAGAACTGGCCGCCCAGTTAGGACTCACTCAGACGCAGGTAAAAATCTGGAACCAGAACCGAAGATCTAAGTTTAAAAAAATCTACAAAAACGGAGAAGGCCCTGGTTTGGAGCACAGTCCAAATAACAGCGACTCCATGGCTTGCAATTCCCCTTCATCCCCACCCATATGGGACAATAGTAGAAGCAGAACCCCTCAGCAACAACAGCAGCAAAGCCTTCCACAGTGCTCTTCCCCCACTTATCTGGAGAATTACCATCCCTGGTATACTCAACAGAACCAGCCTGGACAACACCTTCAGCCTTCTGAAGTTATGCATCAACCTCCTCCCAATACAGTGTATTAAGTGAAAAAAAGACACTGGCACTGATTTATCTAGGTGCCGTCCTGTATTGTTTGTTTGGTTTGGTTTTGATGAGAGTCAAAAATTTTGAAAAACAATGTCAGCTCAAAGTCACAGGTGCCTTGAATTGCTTGACCCCTCAGGCAAAGTTGTTTTGATGGACAATACTTTGGAGACTCCATTATTGTGGATGCTAAAGCCAGGCTGCTAGAAGCTAGTCTTTCTTGAACCTTAGAAGACTTGTGTTTGGCCCTTTAATTTATCGTTAATGACACAACCATTAATGTGATGTTCTAAAGTGCTGCTTCTCGTTCTTTTAAGCCTTTCATGACAACCATGGTTTTATTGTAAAAAAAAATGCTGAATCCTACATAGCCGAGATAAAACTCTGAGGGAGTTATTTTTGAGACTCTTTCTTGTTGACCAATGTCATATTCTGTGCCTTATTAGGTTCATTAGGTTCAGCGAAATGTTCCATAACTCTACTGAATCAAGATAAAAAAGGCTTCTAGATTTAATTCTACACCTCCGCAGCCTCAACACCTTCCAAAAAGCAACATCCAATGACCCAGAGTCAAAGGGTTTCCGAAATCCAGTGCCACTCCATTGTTGATGGACTTCTTTCCAGAGCTGCTGTTTGTGTAACTTGGTCATGGTCCTGTGTCATGGAAATATTTAAAAAAAGAC		Refseq >NM_001097046\|Xenopus laevis distal-less homeobox 3 (dlx3), mRNA CTGGGAGACGCTGGGATGTGAGTCTGGTTCGTTTCTCCGGCTCTGCACAAACATGAGTGGCCCCTATGAGAAGAAGATGGCCGTGTTGACCGACCTGAGCACCTCGTCCCACCCTGTGACCAAGGACTCGCCCACCCTGCCCGAGTCCAGTGCCACAGATATGGGCTACTATAATGGCCACCTCTCTACTGGGCAGCACGACTTCTTCCAGACTCAGGCTTACTCCCCAACCATCAGCTCCTACGGCTACCCCCACCCTCCCCATCCTCAGTACAACTTTAATGGGCTTGTGGGCAACGAGAGCTTCTTGCCCAAGGACGACTACCAGTATGGCTATCGGCCGTTTGTCCATTACAGAGAACCCCCAGTGCAGGAGACAGTATCAGTGAAGGAAGAGCCCGAAACCGAAGTCCGGATGGTTAATGGGAAACCTAAAAAGATCCGGAAGCCAAGAACCATCTACTCTAGTTACCAGCTGGCCGCTTTGCAGAGAAGGTTCCAGAAGGCCCAGTATTTGGCACTGCCCGAGAGAGCAGAACTGGCCGCCCAGTTAGGACTCACTCAGACGCAGGTAAAAATCTGGTTCCAGAACCGAAGATCTAAGTTTAAAAAACTCTACAAAAACGGAGAAGGTCCTGATATGGAGCACAGTCCAAATAATAGTGACTCCATGGCTTGCAATTCCCCTTCATCTCCACCCATATGGGACAATAGTGGAAGCCGAACCCCTCTGCAGCAGCAACAGCAGCAGCAAAGTCTTCCACAATGCTCCTCCCCCTCCTATCTGGAGAACTACCATTCATGGTACACTCAACAGAACCAATCTGGGCAACATCTACAACCTTCTGAAGTTATGCACCAACCTCCTCCCGATACAGTGTATTAAGTGAAAAAAGACACTGGCACTGATTTCTCTTGGTGCCGTCCTGTATTGTTTTTTTGGTTTGGAGTTGGATGGCAGTAAAAAAGTTTGAAAAACAATGTCACTCCAAGTCCCGCTTCGGGATCAGGTGCCTTTTTTACGGTTAAATGCCTAAAGAATTGCTTGATCCCTCAAATGGTTTTGATGGATAAAATTTTGGAGATCCCATTGTTTTAGATGCTAAAGCCAGGTCACCAGAAGCTAATCTTTCTTGAACCTTGGAAGACTTGTCTTTAGACTCCTTAATTTATCATTAATGAAACTGACATTGATGTGATGTTCCAAAGTGTCACTTCTCATGCTTTTAAGCCTATCCTGAAAACCATGGGGTTTTTTTAAAAAAAAAAATAGCTGAATCCTACAATTTTTACGACCCTTCCTGGGACTCGTCGATGTTTGACCAATGTTTTATCCTGTGCCTTATTAAATTAAGCTATATTTAAGTAGTAGGTTCATTCTTTACTTTTTAAAAAAGAAGCAAAATGTTCCATAATTCTACTGAAGAAAATAAAGCTTCTAAAGTTCATTCCGTCTCGGTCTACATCTCCACAGCCTCACCAACTTCCATAAGGAACCATCAAATGTCCCAGAGTCAAAGAGTTCCGAAATCCAGTGCCAATCCATTGTAGATGGACTTCTTTCCAGAGCTGCTGATTGTGTAACTTGGTCACGTTCCTGTGTCATGGAAATATTTAAAAAACAAAAAACAAAAAAAGACTATGGTTGACCTTAACTTATTTTTGTAATATTTTTTTGAGGGGATGTTGTGTTTGCAATGGGAGAAGAAGATGGTGAGGACTAACTTTGATTAGAAGACCTTGGGGGAGCATGTGAAGAATGTTATGGTGAGAATGCAAATAAATTGTTATGGTATTTTGCTGGAGAACCAGCAGATTTGGAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001025566\|distal-less homeobox 3 [Xenopus (Silurana) tropicalis] MSGSYEKKMAVLTDLTTSCHPVTKDSPTLPESTATDMGYYSGHLSGGQHDFFQTQAYSPSISSYGYHHPHHQYNFNGLVGNESFLPKDDYQYGGGYRAFGHYREPPVPETVSVKEEPETEVRMVNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKTGEGPGLEHSPNNSDSMACNSPSSPPVWDNSRSRTPQQQQQQSLPPCSSPSYMENYHPWYTQQTQPGQHLQPSEVMHQPPSNTVY	NCBI Protein >AAA02624\|X-DLL2 [Xenopus laevis] GAVLTDLTTSCHPVTKDSPTLPESSATDMGYYSGHLSAGQHDFFPTQTYSPSISSYGYPHPQYNFNGLVGNEGYLSKDDYQYGAGYRPFAHYREPPVQETVSVKEEPETEVRMVNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWNQNRRSKFKKIYKNGEGPGLEHSPNNSDSMACNSPSSPPIWDNSRSRTPQQQQQQSLPQCSSPTYLENYHPWYTQQNQPGQHLQPSEVMHQPPPNTVY		Refseq >NP_001090515\|homeobox protein DLL-2 [Xenopus laevis] MSGPYEKKMAVLTDLSTSSHPVTKDSPTLPESSATDMGYYNGHLSTGQHDFFQTQAYSPTISSYGYPHPPHPQYNFNGLVGNESFLPKDDYQYGYRPFVHYREPPVQETVSVKEEPETEVRMVNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEGPDMEHSPNNSDSMACNSPSSPPIWDNSGSRTPLQQQQQQQSLPQCSSPSYLENYHSWYTQQNQSGQHLQPSEVMHQPPPDTVY UniProtKB

Genomic

tropicalis

Genome Browser

Synteny

Xenbase G-Browse

GBrowse

Expression		tropicalis	laevis a		laevis b
UniGene		Str.1302	Xl.838		Xl.59850
Gurdon EST/FL		XZG25552	IMAGE:8320715
Affymetrix 1.0		Str.1302.1.S1_a_at			Xl.14513.1.A1_at
GEO data			GEO		GEO

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene	DLX3	OMIM:104510 OMIM:190320
mouse		MGI	Dlx3	All(3) Targeted, knock Out(1) Targeted, other(2)
zebrafish		ZFIN	dlx3b	2 Lines(s)

Publications
First:		Transcriptional activation by the homeodomain protein distal-less 3. [Nucleic Acids Res 1999]
Most recent:		The Xenopus POU class V transcription factor XOct-25 inhibits ectodermal competence to respond to bone morphogenetic protein-mediated embryonic induction. [Mech Dev 2007]
		View All Papers 7 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:		DNA binding transcription factor activity
Biological:		regulation of transcription, DNA-dependent
Cellular Component:		nucleus
EC:
KOG:		[K] Transcription factor DLX and related proteins with LIM Zn-binding and HOX domains

Suppliers		tropicalis	laevis a		laevis b
Clones		open biosystems	open biosystems		open biosystems
		geneservice	geneservice		geneservice
		RZPD imagenes	RZPD imagenes		RZPD imagenes

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