erf Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (6)

Nucleotides (171)

Interactants (8)

XB-GENEPAGE-852956

Gene Symbol: erf Gene Name: Ets2 repressor factor Add Xenopus synonyms Gene Function: transcription factor Interactants: zfp36l1(4) , tfap2c(3) , gata2(1) , prf1(1) , sh3bp4(1) , tgfb1(1) , zfp36(1) View All

XB-GENE-852957

XB-GENE-866453

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001015821\|Xenopus (Silurana) tropicalis Ets2 repressor factor (erf), mRNA CCGGAGCCAGGCACCGAGGGGAGAGCAGCGCCAGTGGGACACAGCCATGAAAACCCCGGCAGAGCCAGGGTTTGCCTTTCCTGACTGGGCCTATAAACCAGAATCAAGCCCGGGCTCGAGACAGATCCAACTGTGGCATTTCATTCTAGAATTGCTGCGGAAAGAGGAGTATCACGATGTCATTGCCTGGCAGGGAGACTATGGAGAGTTTGTCATCAAAGACCCGGACGAAGTGGCACGTCTGTGGGGTGTTCGGAAATGCAAGCCTCAGATGAATTATGATAAGCTGAGCCGGGCACTCAGGTATTATTATAACAAGAGGATTCTCCATAAAACCAAAGGCAAACGCTTTACCTACAAGTTCAACTTCAACAAACTGGTGCTAGTGAACTATCCATTCATTGACATGGGCATGGGAGGAGGGCCGGTCCCTCAGAGTGCCCCACCAGTTCCTTCAGGCGGCACACACTTCCGCTTCCCTCCATGCACCCCATCAGATGTCTTATCTCCCACTGAAGAGCTGCGATCGCCCACTCTTTTTTCCTCTGTGGCACGTCGCTTGGCACGGGGTTCAGTCAGTGACTGCAGTGATGGCACTTCCGCTAACTCTGAAGTAGAGGAAAGTATAAGCGAAGAGCAGCACCGCAGAGGCCCAGGGCCTGACATTCCTGCATATAGGGGCCCTCACCTTCCACGGATTACACCTGACGGCATTTTCAGAGTTTACCCTCGTCCACGGGTGCCAGAGCCTCTCAGCCCATTCCCAGTGTCGCCCATGGGTGCACCAGCAGGTCTTCTCCCTCCACAGCTCTCACCTGCCCTGCCCATGACTCCCAACCACATGAACTACACCCCTTCACCCACACTAAGCCCCATGTACCCAGGGGGTAGTCACTTTTCTTTTAATCCTGAAGACATGAAGCGCTACCTGCAAGCACACACACAGAGTGTCTACAATTACCACCTCAGCCCACGGGCATTCCTGCACTACCCAAGCATTGTGGTTCCTCAGCCCCAACGCCCAGAAAAGCCCTTGCATCTGCCTCCTGAGGAACCACCCTTTAAGTTTAAACTGCAACCCCCTCCACTGGGCAAGAAACAGAAGGAGCGGCCTTTAGAAGCTGGATCATCTTCATCCTCCTCTTTAGGGGTCCCACAGATAAAGGTGGAACCTATTTCTGACACTGAAGAGGATGATGAGGAGCTTATGGTGGAAGTTACTGACATAAGTGAGGAGGAAGAAGAGGATGAGGAAGTATTTAAAGCTCCTAGTGCCCCAGAGCAGAAAGCTCCTCCACCTGCACCTTTTGGAAGGGAAGAGGAGCAAGTTAGTGCTGGGGGAGAAAGTGGCCGATGTATCCCACTCAAATTGCGCTTTAAGCGGCGCTGGAGTGAGGACCAGCGCTTGGAAGCAGAGGGCGTGAGTGGAGAAGAATCTGATAAAAAAGTGCGGGGGAACCAAGAGGAGCTCATTTTGCCCCCTCAGCCTGCTGGTGCTCCTTGTAGAAGGGTGAGTACTGACCTGCAGCGTGCCACAGAGGAACTCTCCCTGGAAAACCGGGATTCCTAATTAATGTTATATTGGCCCCCTGAGAAAGCAAAGACTTGCAGCGTCCAAGGAATTTTTAAACTAATTTTATTTCTCCAGCATTGCGTAGGCGGAGAAAACAAAAAAAAAAACTCAGATGAATTGTTACCAGGAGTTTATCTCTGGACCCTTCTTAAACCAAACACATACAAATTTTAAGTCTGATTCTTGATTTTTGTAATTATTACATTTTTTTATTTTGTTTTTCCTTTGACATGAAATGATGGCATGTACAGACCAGATTAATTCCAGAAGATTTCCTTAAGAAAGACTACCCCCCCCCCCCCTTTCCTTTTGAACCGAAGACGTCTGCGTTATAGATAACTTGCTGGGTGGCCGCCCTTAACCCATTCTAAGTAAATATGTAAATATTGCCTCACCCATGAATAGATAACTGCTCAGAGCCTTAATAAGCCAAAGGGCTTCATTGCAATTTGGCTCTAGAGAACAGCAACAAAATCCCAAAGGAAGCTGCAAACCCATATTTGTAACCCTTCACTGCCCTCTCGCCCGGGCTCTGCTTTTGCCAGCGTAAGACTGGTGCTTACTCAGGTTAATTGGGGTGCAACACCCCTCATTTCACCCTGGGCATACTCCCAACTCCTGTGCATCAGCTTATTTTAGGGGTTTGCTGCCATAGGGCCTTTGATCGTTAAAACGTTGAATCTAAAACAACCAATGATCTTGTGTTTCCCTTTTGCTGCCTTACAAATTAATGGCTTTCTCTGCATTTTATAGACTGTTTTATACTATGTTGTGCACCCTTCCCTCTTACTTACAGAAGGCTGGATTTTGGCAATCTATCTCTTTCTCTCTCTCCCTTTCTCTTTTGGTTCATTCAATGTTTATTTTTGGTTAAAAGTTCTTTTTTGGGCAGGGTGGGCACAAGGATTTTTTTTTTTTTTTAAATGAGATTTTAATGTATAGAGGTTTAAAGTATTAATGAATTTAAAAAAAATGCATATAGTTATACAGAATTTTACCCCTTTTGGTTATTTTACTGCTCTAGAAGCACATTATGAATTTATGGGCTTTTACCAAACAAACCTCTTTCCAGGTTTTCTACCCTATCCCAAATTCCAGGGAATCTGTTATGCAGGGCATATACATAAAATGAAACATGGCTGGTTTGTGGCTCACTAATGTAACTTGTAGTGTCTGTAGCCCTTGGAAGTCACAGTCCAACATACACTAATGTGCCTTACTGACAGGAACCTTCAGGCTGTATCACTGAAAGTCTTAAACATACAGTACCTTCCCTATCTTCCTAGGTAGGAAGGGCAGAAACCATTGTTCATCTGCGCTGCTGCTTGTATATAGGAGACTGAAATGGGTTTTAGCCCTCTTGCATATATACCCTTGAATGGAGTGGTGTTGGGCATTTGGCAGTGCAGACATTCACCACTATGCAGATAATTTGCTGAAATAAAAGTGGAAGCTGCAGAATTTGCTCATATATGAAAAAGGGTTCTAGGTTGTTGAAAGCGATAATATACTCGGCTGAGGAGGGACACCCCTAACTAATAAGGTGTGGGGGGGGGGGGCTAGCACAATATGTTATCATTATTATAACACATTATTTTTCTGCATAAATAGTCATTCATAGAACAGTGCAGTCTCTTTTAAGCAGGGTTGCACTGAATCTATGTTTTGACTGAATCTTAAATCTTTCTCAAAGTATTTGGCCTATCCCAAACCAAATACAAACCCCAAAAAGAAAAAAAAACTGTACGAGGAATGCTTTTTGATATTTTTCTTAATCATGTGACCTAGAGTCATGCAATCTTAAGGGTTCGACCAGGCATAAATCCTGCTGAAAAAAGGCTAAGGCAGGATTTATTTACTGTATAAATGCAGTGGAAATATTCCATGTCCTTATGCAACTCTTTCCCTTACAGTAACCCAAATGTAAAGAAAAGCACTACTTATTGTGGAGGGAACCAGTAAATGACATCTCCCCAAACCCTCAGCCAGCTGTAATGGGTGGCCACCCGATCATTTGCTTATCTAAAAAGTTCACTGCCAAAGGCTTCAGACACCAGCCCTAGAAATCCTCAGGACTATATAAAGAACCCCCTCCCTAAAAACTGGAATCCTAAGCCTATAGCTTCAAGGGTTTTCTGTGACCAGTCTCACTGCCAGGGGGTGGGCTCAGAAAGAAGATGGTGTTGTGAGCTGCGTAGCCCTTTTGGCAGGGGCTAGTAATGGTGCAGCGCATACCAGCAGAACTGAGGGCATAGGGACAAGGGTCTCGCTCTGGGACGGGTACAACTGTTTTCTGAGTTTAACCTCAATATGTATATTAAATTTTCCCCTGCATACACAAAGATTGTAAATATATTTAGCAAAGTCTGTTCACATTTAAGAATGTATATCTCAAACAATAAAAAAAACTTCAAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001096253\|Xenopus laevis Ets2 repressor factor (erf), mRNA ACCGAGGGGAGAGCAGCGCTAGTGGGACACAGCCATGAAAACCCCGGCAGAGCCAGGGTTTGCCTTTCCCGATTGGGCCTATAAACCAGAGTCAAGCCCGGGCTCGAGACAGATTCAACTGTGGCATTTCATCCTGGAGTTGCTACGGAAAGAGGAGTATCACGATGTCATTGCCTGGCAGGGAGACTATGGAGAGTTTGTCATCAAAGACCCGGACGAAGTGGCGCGTCTGTGGGGCGTTCGGAAATGCAAACCGCAGATGAATTATGATAAACTGAGCCGGGCACTCAGGTATTATTATAACAAGAGGATTCTCCATAAAACCAAAGGCAAACGCTTTACCTACAAATTCAACTTTAACAAACTGGTGCTAGTGAATTACCCATTCATCGACATGGGCTTGACAGGAGGGCCGGTCCCTCAGAGTGCCCCACCAGTTCCTTCAGGAGGTACACACTTCCGTTTCCCTCCATGCACCCCATCAGATGTCTTATCTCCCACTGAAGATCTGCGGTCACCCACCCTTTTTTCTTCTGTGGCACGGCGCTTGGCACGAGGTTCAGTCAGCGACTGCAGTGATGGCACCTCCGCTAACTCTGAAGTGGAGGAAAGTATAAGTGAAGAGCAGCACCGCAGAGGCCCAGGGCCTGACATTCCTGCATTTAGGGGCCCTCACCTTCCACGGATTAACCCTGACGGCATGTTCAGGGTCTACCCTCGTCCACGGGTGCCAGAGCCTCTCAGCCCATTCCCAGTGTCGCCCATGGGTGCACCAGCAGGTCTTCTCCCTCCACAGCTCTCACCTGCCCTGTCCATGACTCCCAACCACATGAACTACACCCCGTCACCCACACTAAGCCCCATGTACCCAGGGGGTAGTCACTTTTCTTTTAATCCTGAAGACATGAAGCGCTACCTGCAGGCACACACACAGAGTGTCTATAATTACCACCTCAGCCCAAGGGCATTCCTGCACTACCCAAGCATTGTGGTTCCTCAGCCTCACCGCCCGGAAAAGCTGCTGCATCTGCCTCCTGAGGAACCACCCTTTAAGTTTAAACTGCAACCCCCTCCAATGGGCAAGAAGCAGAAGGAGCAACCTTTAGAAGCTGGATCATCTACATCCTCCTCTTTAGGGGTCCCACAGATAAAGGTGGAACCAATTTCTGACACGGAAGAGGACGAAGAGGAGCTTATGGTGGAAGTTACTGACATAAGTGAGGAAGAAGAAGAGGATGAGGAAGTATTCAAAGCTCCCTGTGCTCCAGAGCAGAAAGCTCCGCCTCCTGCCCCTTTTTGGAGGGAAGAGGAGCCGGTTAGTGCTGGGGGAGAGAGTGGCCGATGTATCCCACTCAAATTGCGATTCAAGCGGCGTTGGAGCGAGGACCAGCGTCTGGAAGCAGAGGGAGTAGGCGGAGAAGAGTCTGATAAAAAAGTACGGGGTAACCAGGAGGAGCTCATTTTCCCCCCACAGCCTGCTGGTGCTCCTTGTAGGAGGGTGAGTACCGACCTGCAGCGTGCCACAGAGGAACTCTCCCTGGAAAACCGCGATTCCTAATTGAGAGCAAGCAAAGACTTGAAGCACCGTATGGGCTGAGAAACGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001015821\|Ets2 repressor factor [Xenopus (Silurana) tropicalis] MKTPAEPGFAFPDWAYKPESSPGSRQIQLWHFILELLRKEEYHDVIAWQGDYGEFVIKDPDEVARLWGVRKCKPQMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFNKLVLVNYPFIDMGMGGGPVPQSAPPVPSGGTHFRFPPCTPSDVLSPTEELRSPTLFSSVARRLARGSVSDCSDGTSANSEVEESISEEQHRRGPGPDIPAYRGPHLPRITPDGIFRVYPRPRVPEPLSPFPVSPMGAPAGLLPPQLSPALPMTPNHMNYTPSPTLSPMYPGGSHFSFNPEDMKRYLQAHTQSVYNYHLSPRAFLHYPSIVVPQPQRPEKPLHLPPEEPPFKFKLQPPPLGKKQKERPLEAGSSSSSSLGVPQIKVEPISDTEEDDEELMVEVTDISEEEEEDEEVFKAPSAPEQKAPPPAPFGREEEQVSAGGESGRCIPLKLRFKRRWSEDQRLEAEGVSGEESDKKVRGNQEELILPPQPAGAPCRRVSTDLQRATEELSLENRDS	Refseq >NP_001089722\|Ets2 repressor factor [Xenopus laevis] MKTPAEPGFAFPDWAYKPESSPGSRQIQLWHFILELLRKEEYHDVIAWQGDYGEFVIKDPDEVARLWGVRKCKPQMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFNKLVLVNYPFIDMGLTGGPVPQSAPPVPSGGTHFRFPPCTPSDVLSPTEDLRSPTLFSSVARRLARGSVSDCSDGTSANSEVEESISEEQHRRGPGPDIPAFRGPHLPRINPDGMFRVYPRPRVPEPLSPFPVSPMGAPAGLLPPQLSPALSMTPNHMNYTPSPTLSPMYPGGSHFSFNPEDMKRYLQAHTQSVYNYHLSPRAFLHYPSIVVPQPHRPEKLLHLPPEEPPFKFKLQPPPMGKKQKEQPLEAGSSTSSSLGVPQIKVEPISDTEEDEEELMVEVTDISEEEEEDEEVFKAPCAPEQKAPPPAPFWREEEPVSAGGESGRCIPLKLRFKRRWSEDQRLEAEGVGGEESDKKVRGNQEELIFPPQPAGAPCRRVSTDLQRATEELSLENRDS

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.48896	Xl.41820
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	ERF
mouse		MGI	Erf	All(2) Targeted, knock Out(2)
zebrafish		ZFIN	erf	4 Lines(s)

Publications
First:		A highly conserved eukaryotic protein family possessing properties of polypeptide chain release factor. [Nature 1994]
Most recent:		Integration of semaphorin-2A/MAB-20, ephrin-4, and UNC-129 TGF-beta signaling pathways regulates sorting of distinct sensory rays in C. elegans. [Dev Cell 2004]
		View All Papers

Functional Ontologies
GO: Molecular:		DNA binding transcription factor activity
Biological:		regulation of transcription, DNA-dependent
Cellular Component:		nucleus
EC:
KOG:		[K] Predicted transcription factor

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.1446.1.S3_at [+] Str.1446.1.S1_at Str.44590.1.A1_x_at Str.48896.1.A1_s_at Str.1446.1.S2_at	Xl.16754.2.A1_x_at [+] Xl.16754.2.A1_at Xl.16754.1.A1_at Xl.16754.1.A1_x_at
Affymetrix 2.0			Xl2.41820.1.S1_a_at [+] Xl2.41820.1.S1_at Xl2.47734.1.A1_at

Symbol legend[+]