lmnb3 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (42)

Nucleotides (145)

Interactants (30)

XB-GENEPAGE-920612

Gene Symbol: lmnb3 Gene Name: lamin B3 Synonyms: lamin LIII, lamin-b3, lamin b3 Add Xenopus synonyms Gene Function: nucleoskeletal protein Interactants: igf2bp3(19) , lmna(8) , lmnb2(5) , cdk1(2) , lmnb1(2) , nup62(2) , pcna(2) View All

XB-GENE-920613

XB-GENE-920628

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		NCBI Nucleotide >CR761177\|Xenopus tropicalis finished cDNA, clone TEgg099a03 AAACTATGGCCACGTCTACCCCCAGCAGAGCCCGGGAACATGCCTCTGCAGCCCCGTCTCCCGGTAGCCCGACGCGCATCAGTCGGATGCAGGAGAAGGAGGACTTGCGGCACCTCAATGACCGGCTGGCCGCGTACATCGAGCGTGTGCGGTCTCTGGAGGCCGACAAGTCGCTGCTGAAGATCCAGCTGGAGGAGAAAGAAGAGGTTACCAGCCGGGAAGTGACCAACCTCAGGCTGCTCTATGAAACCGAGTTAGCCGATGCCCGCAAGCTGCTGGACCAAACGGCCAACGAGAGGGCACGGCTGCAGGTTGAACTGGGCAAGGTTCGGGAGGACTACCGGCAACTACAGGCCAGAAATAGCAAAAAGGAAACAGACCTAAGTCTGGCCCAGAATCTGCTCAGGGACTTGGAAAGTAAACTAAACACCAAAGAAGCCGACCTTGCAACTGCATTGAGTGGCAAAAGAGGTTTAGAAGAGCAGCTTCAAGAGCAGAGAGCCCAGATCGCTGGTCTTGAATCCTCTTTAAGGGATACAACCAAACAGCTTCATGATGAAATGCTATGGAGGGTCGACTTGGAGAATAAAATGCAGACTATTAAAGAACAGCTGGATTTCCAAAGGAATATTCATGAGCAGGAGGTTAAAGAGATGAGGAAGCGCCATGATACAAGGATAGTAGAAATAGATTCGGGTCGGAGGATAGAATTTGAAAGCAAGCTAGCAGAGGCTCTTCAGGAACTAAGGAGAGACCACGAGCAGCAAATCTCTGACTACAAGGAACAACTGGAGAGGAATTTCAGTGCAAAGTTAGAGAATGCACAGCTTGCGGCTGCTAAGAACAGTGATTATGCCAGTGCAACCCGGGAAGAGATTATGGCCACCAAACTAAGGGTGGATACTTTATCATCTCAGCTGAGCCAGTATCAAAAACAGAATTCAGCGCTGGAGGCTAAAGTGCGAGAATTGCAGGACATGCTGGATCGTGCACATGACATGCACAGGAGGCAAATGACCGAAAAGGATCGAGAGGTGACAGAAATAAGGCAAACACTACAGGCCCAGCTGGAAGAATATGAACAGTTGCTGGATGTGAAGCTGGCCTTAGATATGGAGATAAATGCCTACAGGAAGATGCTAGAAGGAGAGGAGCAGAGGCTAAAGCTGTCACCAAGCCCATCTCAAAGAAGTACAGTTTCCCGAGCTTCTACAAGTCAATCAAGCCGCCTTTCACGTGGGAAAAAAAAAAAAAAAAAA	Refseq >NM_001088076\|Xenopus laevis lamin B3 (lmnb3), mRNA GGGAAACTATGGCCACATCTACCCCCAGCCGGGCCCGGGAACATGCCTCCGCCGCCCAGTCTCCCGGGAGCCCGACCCGCATCAGTCGCATGCAAGAGAAGGAGGACTTGCGGCACCTCAATGATAGGTTGGCCGCGTACATCGAGCGTGTGCGATCTCTGGAGGCGGACAAGTCGCTGCTGAAGATCCAGCTAGAGGAGAGAGAAGAGGTTTCTAGCCGGGAAGTGACCAACCTCAGGCAGCTCTATGAAACCGAGTTAGCCGATGCGCGCAAGCTGCTCGACCAAACGGCCAACGAGAGGGCCAGGCTGCAGGTTGAACTGGGCAAGGTCCGGGAGGAATACCGGCAACTACAGGCCAGAAATAGCAAAAAGGAAAATGATCTAAGTCTGGCCCAGAATCAGCTCAGGGACTTAGAAAGTAAACTGAACACCAAAGAAGCCGAGCTTGCAACTGCATTAAGTGGCAAAAGAGGGTTAGAAGAGCAGCTTCAAGAGCAGAGAGCCCAGATTGCTGGTCTTGAATCCTCTTTAAGGGATACAACCAAACAGCTTCACGATGAAATGCTATGGAGGGTCGACTTGGAGAATAAAATGCAGACTATTCGAGAACAACTGGATTTCCAAAAGAATATTCATACGCAGGAGGTTAAGGAGATAAAGAAGCGTCATGACACAAGGATTGTAGAAATAGATTCGGGCCGGCGGGTAGAATTTGAAAGCAAACTAGCGGAGGCACTTCAGGAACTAAGGAGAGACCACGAGCAGCAAATCTTGGAGTACAAGGAGCATCTGGAGAAGAATTTCAGTGCAAAGTTGGAGAATGCACAGCTAGCGGCTGCTAAAAACAGTGATTATGCCAGTGCAACCCGGGAAGAGATCATGGCCACAAAACTAAGAGTGGATACTTTATCATCCCAGCTGAACCATTATCAAAAACAGAATTCTGCACTGGAGGCTAAAGTGCGAGATTTACAAGACATGCTGGATCGTGCCCATGACATGCATAGGAGGCAGATGACCGAGAAGGACCGTGAGGTGACAGAAATAAGGCATACACTGCAGGGCCAACTGGAGGAATATGAACAGTTGCTGGATGTGAAACTAGCCTTAGATATGGAGATAAATGCCTACAGGAAGATGCTAGAAGGCGAGGAGCAGAGGCTAAAGCTGTCACCAAGCCCTTCTCAGAGAAGTACAGTTTCTCGAGCTTCTACAAGTCAAACAAGCCGCCTTTTACGTGGGAAAAAGAGAAAGTTAGACGAAACTGGCAGATCAGTGACCAAAAGGTCCTATAAAGTAGTTCAACAGGCCTCTTCCACAGGGCCAGTGTCTGTAGAAGATATTGACCCAGAAGGGAACTATGTCAGGCTGTTGAACAACACAGAAGAGGATTTTTCTCTGCATGGATGGGTTGTTAAGAGAATGCATATGAGCCTTCCAGAAATTGCATTTAAACTTCCATGTCGCTTCATTTTGAAATCCAGTCAACGTGTCACTATCTGGGCTGCTGGTGCTGGTGCTGTACACAGTCCTCCCACCGATTTGGTCTGGAAATCTCAGAAGACTTGGGGAACAGGCGATAATATTAAAATCACTCTCCTTGATTCCACTGGTGAAGAATGCGCTGAGCGAACCCTTTATAGAGTCATTGGAGAAGAGGGTGAAACGGATGAAGATTTTGTAGAGGAAGAGGAGTTAGAACGGCAGTTCCGTTCCCAGTCTCACCAATCAGTGGATCCCAGCTGTTCCATCATGTAATTAAAGCTGAGAATTTCAAAGGAAAATCATGGAGGTTTCCAGAATCTCCCACTTCTACTGGAATATTTGGATTGAGTTTAATCTTTTTGCTATCCACCGGAGAACATTTTGGTGGGCATTTCTTTCCCTCAGAGCCTGACGACTTAAGAACCGATGAAGGAAATAACGTGCTTTAATTTCAAGACTGTTGAAACCCATACACTGTACATTCTTCAATTAAATGTTTTTTTTTCATCTGTAAAAGGTACTAGCTTGGTACTTCCTATGTGAAAGGGGCAGGGAATATTTGTTTCTAAAACACAATTTAACAGTTAATGGAAATGATTCCTCCCTGCATCCTTCTCCAGATACTGAACTACAACTTGCAACACCCCTGACTGTCTTAAGACATGGATTGGATGTTGGGAGTTGTAGATAAAGACCCAGGAGGCTGCTGGTTGCCTATGCCTGCTGTAGCTCTTTGCCTTTGCCTTTATGCATATGCTCTGACTGGGGTTTTCTCCCCTTTAAAGCCTGATGCATATTAACTACATGCCATCTGCGGCTGTTACTAGCCATTCAGCATGTGGTTTAATGTGCTTGGTGGTCAGATGCATAAGGTGGCAAAGCAGCTCCAATATTGCTGATCTTTCTGCAAGGGGAAAAGCAGTATTTTACTAACAGCCACATGCCATTTAATACAGCCTTTAATGCAAGCGGTTAAATGAAAGGAAACTGGACCCCCTAACTTGCTAAAAATCCTGATTGAGTAGTCAGAATGCATGTTCTTTAAAGGCAAGACAAAAGTGTACCTCATTATCTCTATACTGTCTATCTGTAGATGCTACAAAGCTCTTTCCTATAAGAACAACTTTATTTAAGCTATATCATGCCTTGACCTCTGACAACGCTATTCAGGACAGATTGTGAGACCAATGGAGAATTGAGCTTAAAATCCAGCATGGAGCATAATCA
Protein		NCBI Protein >CAJ81859\|lamin A/C [Xenopus tropicalis] MATSTPSRAREHASAAPSPGSPTRISRMQEKEDLRHLNDRLAAYIERVRSLEADKSLLKIQLEEKEEVTSREVTNLRLLYETELADARKLLDQTANERARLQVELGKVREDYRQLQARNSKKETDLSLAQNLLRDLESKLNTKEADLATALSGKRGLEEQLQEQRAQIAGLESSLRDTTKQLHDEMLWRVDLENKMQTIKEQLDFQRNIHEQEVKEMRKRHDTRIVEIDSGRRIEFESKLAEALQELRRDHEQQISDYKEQLERNFSAKLENAQLAAAKNSDYASATREEIMATKLRVDTLSSQLSQYQKQNSALEAKVRELQDMLDRAHDMHRRQMTEKDREVTEIRQTLQAQLEEYEQLLDVKLALDMEINAYRKMLEGEEQRLKLSPSPSQRSTVSRASTSQSSRLSRG	Refseq >NP_001081545\|lamin-L(III) [Xenopus laevis] MATSTPSRAREHASAAQSPGSPTRISRMQEKEDLRHLNDRLAAYIERVRSLEADKSLLKIQLEEREEVSSREVTNLRQLYETELADARKLLDQTANERARLQVELGKVREEYRQLQARNSKKENDLSLAQNQLRDLESKLNTKEAELATALSGKRGLEEQLQEQRAQIAGLESSLRDTTKQLHDEMLWRVDLENKMQTIREQLDFQKNIHTQEVKEIKKRHDTRIVEIDSGRRVEFESKLAEALQELRRDHEQQILEYKEHLEKNFSAKLENAQLAAAKNSDYASATREEIMATKLRVDTLSSQLNHYQKQNSALEAKVRDLQDMLDRAHDMHRRQMTEKDREVTEIRHTLQGQLEEYEQLLDVKLALDMEINAYRKMLEGEEQRLKLSPSPSQRSTVSRASTSQTSRLLRGKKRKLDETGRSVTKRSYKVVQQASSTGPVSVEDIDPEGNYVRLLNNTEEDFSLHGWVVKRMHMSLPEIAFKLPCRFILKSSQRVTIWAAGAGAVHSPPTDLVWKSQKTWGTGDNIKITLLDSTGEECAERTLYRVIGEEGETDEDFVEEEELERQFRSQSHQSVDPSCSIM UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.31 [+] Str.68185	Xl.1238 [+] Xl.79990 Xl.2070
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human
mouse
zebrafish

Publications
First:		Changes in the nuclear lamina composition during early development of Xenopus laevis. [Cell 1985]
Most recent:		Thyroid hormone-regulated expression of nuclear lamins correlates with dedifferentiation of intestinal epithelial cells during Xenopus laevis metamorphosis. [Dev Genes Evol 2013]
		View All Papers

Functional Ontologies
GO: Molecular:		structural molecule activity
Biological:
Cellular Component:
EC:
KOG:		[DY] Nuclear envelope protein lamin, intermediate filament superfamily

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		StrJgi.4912.1.S1_s_at [+] Str.31.1.S1_s_at	Xl.2070.1.A1_at [+] Xl.1238.1.S1_at
Affymetrix 2.0			Xl2.1238.1.S1_at [+] Xl2.11249.1.S1_at Xl2.2070.1.A1_at

Symbol legend[+]