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XB-GENEPAGE-
1009019
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Gene Symbol: tgfbrap1
Gene Name: transforming growth factor beta receptor associated protein 1 Synonyms: Add Xenopus synonyms , Nomenclature history Gene Function: Vacuolar assembly/sorting proteins VPS39/VAM6/VPS3 Protein Function  :
Interactants: Loading ... 
OMIM Disease Associations: |
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| Xenbase Gene ID | XB-GENE-1009020 | XB-GENE-6486558 | XB-GENE-17346391 | ||||
| Gene Symbol | tgfbrap1 | tgfbrap1.L | tgfbrap1.S | ||||
| Chromosome | Chr02 | chr2L | chr2S | ||||
| Molecules | tropicalis | laevis.L | laevis.S | ||||
| Gene |
Genomic sequence
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Genomic sequence
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Genomic sequence
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| CDS |
Gene model
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Entrez Gene
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Entrez Gene
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Entrez Gene
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| mRNA |
NCBI Nucleotide
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| Protein
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NCBI Protein
TrEMBL
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TrEMBL | TrEMBL | ||||
| Genomic | tropicalis | laevis.L | laevis.S | ||||
| Genome Browser |
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| Links |
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| Genomic Synteny | Genomicus | ||||||
| Expression | tropicalis | laevis.L | laevis.S | ||||
| Ensembl | Ensembl | ||||||
| UniGene | Str.86956 | Xl.65904 | |||||
| RNA-Seq profile | Stage profile: |
Stage profile:
Tissue heatmap:
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| Experimental regulation |
Regulation heatmap:
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| Images | 4 expression image(s) for tropicalis and laevis | ||||||
| Data Mining | tropicalis | laevis.L | laevis.S | ||||
| XenMine | tgfbrap1 | tgfbrap1.L | tgfbrap1.S | ||||
| Phenotype | tropicalis | laevis.L | laevis.S | ||||
| Smith Morpholino Screen | tgas082f12 | ||||||
| Orthology |
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| human |
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| mouse |
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| zebrafish |
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| chicken |
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| fruit fly |
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| worm |
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| Publications | |||||||
| First: |
Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides. [PLoS Genet 2006]
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| Most recent: | |||||||
| View All Papers 1 paper(s) referencing morpholinos | |||||||
| Functional Ontologies | tropicalis | laevis.L | laevis.S | ||||
| GO | 5 terms | 3 terms | 3 terms | ||||
| PANTHER | tgfbrap1 | ||||||
| KEGG Pathways | K20177 | K20177 | |||||
| KOG |
[U] Vacuolar assembly/sorting proteins VPS39/VAM6/VPS3
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| Reagents | tropicalis | laevis.L | laevis.S | ||||
| CRISPR / TALEN | CRISPR tools | CRISPR tools | CRISPR tools | ||||
| Clones | |||||||
| GE Dharmacon | GE Dharmacon | GE Dharmacon | |||||
| Source BioScience | Source BioScience | ||||||
| Morpholino | tgfbrap1 MO1 | tgfbrap1 MO1 | tgfbrap1 MO1 | ||||
| Affymetrix 1.0 | StrJgi.5647.1.S1_at [+] | ||||||
| Affymetrix 2.0 | |||||||
Symbol legend[+]
