Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (1) GO Terms (3) Nucleotides (40) Proteins (17) Interactants (202) Wiki
XB-GENEPAGE- 1009019

Gene Symbol: tgfbrap1

Gene Name: transforming growth factor beta receptor associated protein 1

Synonyms:
Add Xenopus synonyms , Nomenclature history

Gene Function: Vacuolar assembly/sorting proteins VPS39/VAM6/VPS3

Protein Function:


Interactants: YYY

OMIM Disease Associations:
 
Xenbase Gene ID XB-GENE-1009020 XB-GENE-6486558 XB-GENE-17346391
Gene Symbol tgfbrap1 tgfbrap1.L tgfbrap1.S
Chromosome scaffold_2 chr2L chr2S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 6.0 GBrowse 9.1 JBrowse 9.1
Entrez Gene
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide
Protein NCBI Protein TrEMBL TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v7.1 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.86956 Xl.65904
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 4 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine tgfbrap1 tgfbrap1.L tgfbrap1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen tgas082f12      
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards TGFBRAP1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Tgfbrap1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN tgfbrap1 ZFIN Ensembl
chicken
GEISHA TGFBRAP1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides. [PLoS Genet 2006]
Most recent:
View All Papers 1 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 3 terms 3 terms
EC
PANTHER tgfbrap1
KEGG Pathways K20177 K20177
KOG [U] Vacuolar assembly/sorting proteins VPS39/VAM6/VPS3
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
Morpholino tgfbrap1 MO1 tgfbrap1 MO1 tgfbrap1 MO1
Affymetrix 1.0 StrJgi.5647.1.S1_at [+]
Affymetrix 2.0

Symbol legend[+]

My Xenbase: [ Log-in / Register ]
version: [4.5.0]

Major funding for Xenbase is provided by the National Institute of Child Health and Human Development, grant P41 HD064556