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Summary Expression Gene Literature (2) GO Terms (2) Nucleotides (141) Proteins (49) Interactants (104) Wiki
XB-GENEPAGE-1018490
Gene Symbol:
ush1c

Gene Name:
USH1 protein network component harmonin

Synonyms:
( Add synonyms , Nomenclature history )

Gene Function:
PDZ domain

Protein Function :


Interactants:
Loading ...

Diseases: 


Disease Ontology:
autosomal recessive nonsyndromic deafness 18A [+]

OMIM:
USHER SYNDROME, TYPE I; USH1 [+]

External Links:
 
Xenbase Gene ID XB-GENE-1018491 XB-GENE-17345648 XB-GENE-6078774
Gene Symbol ush1c ush1c.L ush1c.S
Chromosome scaffold_924 chr4L chr4S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 100125158
108713697
734961
mRNA RefSeq NCBI Nucleotide RefSeq
Protein RefSeq NCBI Protein RefSeq
Genomic
tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining tropicalis laevis.L laevis.S
XenMine ush1c ush1c.L ush1c.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards USH1C OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Ush1c MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Ush1c Ensembl
zebrafish
ZFIN, AGR ush1c ZFIN Ensembl
chicken
GEISHA USH1C Ensembl
fruit fly
worm
Publications
First RNA-Seq and microarray analysis of the Xenopus inner ear transcriptome discloses orthologous OMIM(®) genes for hereditary disorders of hearing and balance., BMC Res Notes 2015        
Most Recent Usher syndrome type 1-associated cadherins shape the photoreceptor outer segment., J Cell Biol 2017                    
All View All Papers 1 paper(s) referencing OMIMs 2 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 0 term 2 terms
PANTHER ush1c
KEGG Pathways K21877
KOG [S] FOG: PDZ domain
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks ush1c
Morpholinos ush1c MO1 ush1c MO1 ush1c MO1
ORFs ush1c ORF1 ush1c.L ORF1
Clones Horizon Source BioScience Horizon Horizon Source BioScience

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