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XB-GENEPAGE-
1033828
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Gene Symbol: vegt
Gene Name: vegt protein Synonyms: brat , xombi , antipodean , tVegT , Apod , vegt-a , vegt-b Add Xenopus synonyms , Nomenclature history Gene Function: T-box transcription factor, meso-endodermal determinant Protein Function  :
Transcription factor required for both mesoderm and endoderm formation in the embryo; signaling determinants and concentration levels may determine which germ layer is formed. Acts together with beta-c...[+]
Interactants: Loading ... 
OMIM Disease Associations: |
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1/6 | Xenbase Gene ID | XB-GENE-1033829 | XB-GENE-6252142 | XB-GENE-1033836 | ||||||||
| Gene Symbol | vegt | vegt.L | vegt.S | ||||||||
| Chromosome | Chr01 | chr1L | chr1S | ||||||||
| Molecules | tropicalis | laevis.L | laevis.S | ||||||||
| Gene |
Genomic sequence
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Genomic sequence
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Genomic sequence
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| CDS |
Gene model
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Entrez Gene
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Entrez Gene
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Entrez Gene
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| mRNA |
Refseq
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Refseq
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Refseq
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| Protein
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Refseq
Swiss-Prot
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Refseq
Swiss-Prot
TrEMBL
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Refseq
Swiss-Prot
TrEMBL
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| Genomic | tropicalis | laevis.L | laevis.S | ||||||||
| Genome Browser |
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| Genomic Synteny | Genomicus | ||||||||||
| Expression | tropicalis | laevis.L | laevis.S | ||||||||
| Ensembl | Ensembl | ||||||||||
| UniGene | Str.65006 | Xl.1775 | Xl.3520 | ||||||||
| RNA-Seq profile | Stage profile: |
Stage profile:
Tissue heatmap:
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| Experimental regulation |
Regulation heatmap:
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| Images | 49 expression image(s) for tropicalis and laevis | ||||||||||
| Data Mining | tropicalis | laevis.L | laevis.S | ||||||||
| XenMine | vegt | vegt.L | vegt.S | ||||||||
| Phenotype | tropicalis | laevis.L | laevis.S | ||||||||
| Smith Morpholino Screen | tegg048b09 tgas127e07 | ||||||||||
| Orthology |
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| Publications | |||||||||||
| First: |
The Xenopus T-box gene, Antipodean, encodes a vegetally localised maternal mRNA and can trigger mesoderm formation. [Development 1996]
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| Most recent: |
Xenopus pitx3 target genes lhx1 and xnr5 are identified using a novel three-fluor flow cytometry-based analysis of promoter activation and repression. [Dev Dyn 2017]
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| View All Papers 42 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs | |||||||||||
| Functional Ontologies | tropicalis | laevis.L | laevis.S | ||||||||
| GO | 25 terms | 12 terms | 5 terms | ||||||||
| PANTHER | vegt | ||||||||||
| KEGG Pathways | K10180 | K10180 | K10180 | ||||||||
| KOG |
[K] TBX2 and related T-box transcription factors
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| Reagents | tropicalis | laevis.L | laevis.S | ||||||||
| CRISPR / TALEN | CRISPR tools | CRISPR tools | CRISPR tools | ||||||||
| Clones | EXRC - 1 clone(s) | EXRC - 2 clone(s) | |||||||||
| GE Dharmacon | GE Dharmacon | GE Dharmacon | |||||||||
| Source BioScience | Source BioScience | Source BioScience | |||||||||
| Antibody | vegt Ab1 | vegt Ab1 | vegt Ab1 | ||||||||
| Morpholino | vegt MO1 , vegt MO2 , vegt MO3 , vegt MO4 , vegt MO5 , vegt MO6 , vegt MO7 , vegt MO8 , vegt MO9 , vegt MO10 | vegt MO1 , vegt MO2 , vegt MO3 , vegt MO4 , vegt MO5 , vegt MO6 , vegt MO7 , vegt MO8 , vegt MO9 , vegt MO10 | vegt MO1 , vegt MO2 , vegt MO3 , vegt MO4 , vegt MO5 , vegt MO6 , vegt MO7 , vegt MO8 , vegt MO9 , vegt MO10 | ||||||||
| ORF | vegt ORF1 | ||||||||||
| Affymetrix 1.0 | Str.26654.1.A1_at [+] | Xl.1775.1.S1_at | Xl.3520.1.S1_at | ||||||||
| Affymetrix 2.0 | Xl2.1775.1.S1_at | Xl2.3520.1.S1_at | |||||||||
Symbol legend[+]
