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Summary Expression Gene Literature (21) GO Terms (6) Nucleotides (94) Proteins (32) Interactants (864) Wiki
XB-GENEPAGE-1033867
Gene Symbol:
ptch2

Gene Name:
patched 2

Synonyms:
ptc-2 , ptc2 , patched-2 , patched 2 , xptc-2 , xptc 2 , ptch2-a , ptch2-b ( Add synonyms , Nomenclature history )

Gene Function:
hedgehog receptor

Protein Function :


InterPro :
Leu-rich rpt , Ubiquitin-like domsf , Ubiquitin-like dom , LRR dom sf [+]

Interactants:
Loading ...

Diseases: 


Disease Ontology:
medulloblastoma [+]

OMIM:
MEDULLOBLASTOMA; MDB [+]

External Links:
1/6
 
Xenbase Gene ID XB-GENE-1033868 XB-GENE-1033872 XB-GENE-6252346
Gene Symbol ptch2 ptch2.L ptch2.S
Chromosome Chr04 chr4L chr4S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 100492958
100191013
397836
mRNA NCBI Nucleotide RefSeq RefSeq
Protein NCBI Protein RefSeq RefSeq
Genomic
 tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining tropicalis laevis.L laevis.S
XenMine ptch2 ptch2.L ptch2.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards PTCH2 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Ptch2 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Ptch2 Ensembl
zebrafish
ZFIN, AGR ptch1 ZFIN Ensembl
chicken
GEISHA PTCH2 Ensembl
fruit fly
worm
Publications
First Distinct expression of two types of Xenopus Patched genes during early embryogenesis and hindlimb development., Mech Dev 2000              
Most Recent Xenopus slc7a5 is essential for notochord function and eye development., Mech Dev 2019                  
All View All Papers 4 paper(s) referencing morpholinos 2 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 6 terms 2 terms 2 terms
PANTHER ptch2
KEGG Pathways K06225 K11101
KOG [T] Membrane protein Patched/PTCH
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks ptch2
ORFs ptch2.L ORF1
Clones Horizon Source BioScience Horizon Source BioScience Horizon Source BioScience

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
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