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Summary Expression Gene Literature (174) GO Terms (44) Nucleotides (181) Proteins (53) Interactants (1465) Wiki
XB-GENEPAGE-1034768
Gene Symbol:
sox9

Gene Name:
SRY-box 9

Synonyms:
cmd1 , sox-9 , sra1 , cmpd1 , sox9-b , sox9-a ( Add synonyms , Nomenclature history )

Gene Function:
HMG-box transcription factor

Protein Function :
Transcription factor that plays a key role in chondrocytes differentiation and skeletal development. Specifically binds the 5'-ACAAAG-3' DNA motif present in enhancers and super-enhancers and promotes ...[+]



Interactants:
Loading ...

Diseases: 


Disease Ontology:
campomelic dysplasia [+]

OMIM:
CAMPOMELIC DYSPLASIA [+]

External Links:
1/6
 
Xenbase Gene ID XB-GENE-1034769 XB-GENE-1034775 XB-GENE-6253910
Gene Symbol sox9 sox9.L sox9.S
Chromosome Chr10 Scaffold30 chr9_10S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 549607
494585
399405
mRNA RefSeq RefSeq RefSeq
Protein RefSeq Swiss-Prot  More.. RefSeq Swiss-Prot  More.. RefSeq Swiss-Prot  More..
Genomic
X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine sox9 sox9.L sox9.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards SOX9 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Sox9 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Sox9 Ensembl
zebrafish
ZFIN, AGR ZFIN, AGR sox9b sox9a ZFIN Ensembl
chicken
GEISHA SOX9 Ensembl
fruit fly
worm
Publications
First Transcription factors in disease., Curr Opin Genet Dev 1996  
Most Recent Transcriptomic analysis identifies early cellular and molecular events by which estrogen disrupts testis differentiation and causes feminization in Xenopus laevis., Aquat Toxicol 2020  
All View All Papers 51 paper(s) referencing morpholinos 10 paper(s) referencing OMIMs 16 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 44 terms 12 terms 18 terms
PANTHER sox9
KEGG Pathways K18435 K18435 K18435
KOG [K] HMG-box transcription factor
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks sox9
Antibodies Sox9 Ab1 Sox9 Ab1 Sox9 Ab1
Morpholinos sox9 MO1 sox9 MO1 sox9 MO1
ORFs sox9.L ORF1
Clones Horizon Source BioScience Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
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