loc398404 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (5)

Nucleotides (105)

Interactants (17)

XB-GENEPAGE-1217928

Gene Symbol: loc398404 [provisional] Gene Name: ras-related protein ras-dva [provisional] Synonyms: ras-dva Add Xenopus synonyms Gene Function: Ras-related small GTPase Interactants: hesx1(2) , agr2(1) , bmp4(1) , fgf8(1) , foxg1(1) , msx1(1) , otx2(1) View All

XB-GENE-1217929

XB-GENE-1217936

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001011503\|Xenopus (Silurana) tropicalis ras-related protein ras-dva (ras-dva), mRNA TTTATTCTCTTGTGCTCCCTTGGATGCATCTGAGCGCACAAAACCAAGGCAACGAATACAGAGGAAAGCAAAGTACGTCTGTTCAGCAGCACTTACACAAGGACAAGACTACGAGCAGTTCGTATCTAAATCCCCCTGATAAATCATTTATCAGCACCCTGGATAGCGCCGCTGGATCCTTCTCTGCTCTCAATTGCCCAGTCGTTCCAGGCGCAGAGCGCAGCGCACACTCCAAGCCCAGCATGTCCCTGTCTGTGTCCCCAAGTGACACTGTCCGCTTGGTGTTCTTTGGAGCTGCCGGGGTCGGTAAGACTGCCCTGATCCAGCGATTCCTCAATGACCGTTTCGATGATCGCTACCGGCGCACAGTGGAGGAGATGTACTGCCTGAATCCCGAGCCTGGGGCGCTCCAGTTGCGCATCCAGATCCTGGACACCAGCGGCAGCTACTCCTTCCCGGCTATGCGCAAACTCAGCATCCAGCAAGGGGACGCCTTTGCCCTGGTCTTCTCTCTGTCAGAGCCGGACTCCTTCCAGGAGGTGGAGAGGCTGAGGAGTGAGATCATCCAGGTGAAAGGAGACGCAGAGGTGCCCATAGTGGTGGTTGGCAATCAGATGGACTTGTTCCCTGGGCTGGAGGCTGGCCAGCAGGTGGATCTCCGGGCAGCTGCCACCGCAGAGTTGGAATGGGACTGTGGCTATGTGGAGACCTCGGCTAAGGTGGACTACCGAGTGTGGGACGTGTTCCACCAGCTGATCCGCAGGGTCAACTCACCTGCCTGGCTGAGCCCAGCCCTAGAGAGGCGCAGAGCCAGTGCGCAGCCAGAGGCAAACAGGAGCCAGCAGCGCAGGAAACCTCAGAGCTGTACTTTATCCTAAAGCAGTCTCATAGGAATGGATCTCCATCTCTGCAGGCCCTGTACCAGCAGCTGAAACTATGGCCTCTCCAGCCCCATTAGTGTTAGGGCCACTTGGTACCCAAAAAGCCTTGGGTGTCCATTGGAATGATTACATGGGTGGGACATTTCCGAACAAACCACTGGCGAACAATGTTCCCTCTAAGGTGTGCGCTTGTGCGCTCAAACAGGCACAGTGGGTGAGGAAAACTGTATCCTTGTGCAAATCCAGGGGTGCTAGCTATTGATATTCTTATAGACCATCATACAACTATACTAGCATAGGTATTCTCCTGTACTAAGCACAATTAAGCAGGAACAGTCCCCTTGCTCAAGTTTGCTCATAGCCTGTACAGAGAGATGCCATAAAACTATACCAGCAAAGGTTTTTACTATAAAGCAGGAATGTTTCAGGTTAGTTCGCCTTTAAAGAGTGTGTCCACTAACTTGTGTCTGTGCTGTGCATGCAAAAATGTGTAATTTTAAAAAAATGTGAGTATGGGTGATGCTGCGCACACATTTGTACACTGCTCCTTAAAAGTTCCATAATAATTCTTTTGCACACAGACTAAAGTAAATTAGAAGGAACATTGCTGGTGAATGAGAGAAGGCATCCCTGCCAACCTGATGGCACTTACTACAAGTGCACAGTGAGAGAGTGCCAAGTCTCCCAGCCACAGAGACTGGACCAGCCGCACTGGTGGATAAGAGAAGCCGTCCCTGCCAACCTGATTGCACTGCATACGAGTGCCAAAGTGAATGCCAAGTCTCCCAGTCAGTCACAAAGGCAGGGCTGTGCTTGCACAAAGCCACTCTAGGGATAAGAAATCGGAAACAGTTACTCTAGGAAGAAACAGTAGTCTGTGTTGCAAAATATTTGCTCAGTGTGTAAAGAACTGGTTATATAATCTGGGTGGGACACTACACGTTTTTTATACCCCGTAACACCTGATAAAGAAAATAGACCTACTGTATTTGCCTAAGGTTGCGAATGAATGCTATTTATCAGCCGACTGCTTGGTACTGTAGAACAAGAGCTGATACCTGGCCTTCCTGCCCCCACAGGAATAAATGCTCATTCTAAAAAACTGTGGGTCATGTGGTTGCAGCCCTAGTGTTACCTGTGTTAGTGAATGAGCTTCTTGTGCCAAAAACATCATTACCCCTTGCTATAATTGGATGGGGGGGCAGTGTCTTTTATAATTTATTTTACATTGTGGAAGAATAATGACTGTCACAGGCAGAGATGGAAAACCCGTGGTTGTCAAGATGTTGCCCAAAACCCCCCATGGGTCACCCAAGACTGTTCCAAGGACAATGCTACAAGGCTGTTATATCAGGGACCCTGTGCTTATATGCTTCTGATACATTCACCCGGTTTGCACTTTAATACTAGTGTTGCTTTGTGAAGGGGAAGTTAGAACTGTTATTACTGCACACTTCTGTAACGTTTTACTTCTGTCTGTAAATAAAAACAATGCTTTGTATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001088853\|Xenopus laevis ras-related protein ras-dva (LOC398404), mRNA GAGGCGCAACAGAGAGTTACTGTTCTATTTCTAGTGCGCTCTGTTCCCTGATTTCTTCTCAAGCCGCAATATCAAGAAGAAGGATAAGGAGGGAAGGAAAGTGAAGCAATAAAACAACACTATAGGAGGGCAGGAGCCAGAAGCCGTTCCTATCCTAAGGACTCCTATCAGCACCTTGGATAGCGCCTCATTTAGGGGAGAGAAACGCAGACAAAAGAAAGCGCAATCTCACCATGTCTGTATCCTCCAGTGACACTGTGCGCCTGGTGTTCTTTGGCGCTGCCGGGGTCGGCAAGACTGCCCTGATCCAGCGCTTCCTCAACGATAGTTTCGAGGAGCGATACCGGCGCACAGTGGAGGAGATGCACTGCCTGAACCCCGAGCCCGGGGAGCTCCAGTTGCGCATCCAGATCCTGGACACCAGCGGCAGCTACTCCTTCCCGGCCATGCGCAAACTCAGCATCCAGCAAGGGAACGCCTTTGCCCTGGTCTTCTCTCTGTCCGAGCCGGACTCCTTCCAGGAGGTGGAGAGGCTGAGGAGCGAGATCATCCAGGTGAAAGGAGACGCCGAGGTGCCTATAGTGGTGGTGGGAAATCAGATGGACTCGTTCCCCGGGGTAGAGGCCGGACAGATGGTGGATCTCAGGGCTGCTGCCACCGCAGAGTTGGAATGGGACTGTGGTTATGTGGAGACCTCGGCTAAAGTGGACTACAGGGTGTGGGACGTGTTCCAGGAGCTGATCCGCAGGGTGAACTCTCCTGCCTGGCTGAGCCCAGCCCTAGAGAGGCGCAGAGCCAGTGCGCAACCAGAGTCCAACAGAAAAGCGCAGCGCAGGAAGCCCCAGAGTTGCACTTTATCCTAAAGCAGCTTCACTGCACGAATGGACCTCCTTTACCCACACCCGAAGCTCCACTAGGGCATCTCCAGTCCCATTAGTGTTAGGATCACTTGGTGCCTACTGCTTGGGTGTCCATTGGAATGATGACAAAGGTGGGACATTTTTTGAACAAACATAGACTATGCCAGAAGCACTGGTGGATGAGAGAAATCATCTGTGCCAACCTGTGGCCTTTACTACTCATGAACAGTGATAGAGTGCCAAGTCTCCCAGTCCATCACTGGTGGAGAAGAGAAGTCACCATTGCCAACCAGGTGACACTTAGTGACAGCAAAGTGCCAAGTATACCAGCCACAAAGACTCTACTGGCTGATAAAAGAAGCCATCACTTCCAACTTGATACCACTGACTAAGAGTACTAAATGAGTGCCAAGTCTCCCAGTCACAAAGACTCTACTGGCTGATAAAGAAGCCATCCCTGCAATCCTGATATCATTTAATAAGAGTACGAAATGGGTGCCAAGTCTACCAGTCACAAAGGCAGGGCCCTCCCTAGGCTGTGCTTGCTCAAAAGGCATTCTAGGGATAAGAGATCGGAAATAGCTGTTCTTCTAGGAAGAAATAAGAATCTGTTGTTGGGCAGCAAAATATTTGCTTAGTGTGAAAAGAACTGATTATATAATCTGGGTGGGACGCTATACATATTGTTATACCCCATAATGTCTGATAAACAAAACAGACCTTGTATTTGCCTAAGGTTGCTCATGAATGTTGTTTATGAAGCAGACTGCTTGGTACAGTTGAACAAATGCCCGGCCATTCGGTGGAACAAATGCTCATGCTAAAAA
Protein		Refseq >NP_001011503\|ras-related protein ras-dva [Xenopus (Silurana) tropicalis] MSLSVSPSDTVRLVFFGAAGVGKTALIQRFLNDRFDDRYRRTVEEMYCLNPEPGALQLRIQILDTSGSYSFPAMRKLSIQQGDAFALVFSLSEPDSFQEVERLRSEIIQVKGDAEVPIVVVGNQMDLFPGLEAGQQVDLRAAATAELEWDCGYVETSAKVDYRVWDVFHQLIRRVNSPAWLSPALERRRASAQPEANRSQQRRKPQSCTLS	Refseq >NP_001082322\|ras-related protein ras-dva [Xenopus laevis] MSVSSSDTVRLVFFGAAGVGKTALIQRFLNDSFEERYRRTVEEMHCLNPEPGELQLRIQILDTSGSYSFPAMRKLSIQQGNAFALVFSLSEPDSFQEVERLRSEIIQVKGDAEVPIVVVGNQMDSFPGVEAGQMVDLRAAATAELEWDCGYVETSAKVDYRVWDVFQELIRRVNSPAWLSPALERRRASAQPESNRKAQRRKPQSCTLS

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.27324	Xl.16543
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		6 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human
mouse
zebrafish

Publications
First:		Expression zones of three novel genes abut the developing anterior neural plate of Xenopus embryo. [Gene Expr Patterns 2003]
Most recent:		Expression patterns of genes encoding small GTPases Ras-dva-1 and Ras-dva-2 in the Xenopus laevis tadpoles. [Gene Expr Patterns 2011]
		View All Papers 2 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:		GTP binding
Biological:		protein transport small GTPase mediated signal transduction
Cellular Component:
EC:
KOG:		[R] Ras-related GTPase (alt_id KOG:0395)

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.27324.1.S2_at [+] Str.27324.1.S1_at Str.21096.1.A1_a_at	Xl.16543.1.S1_at
Affymetrix 2.0			Xl2.16543.1.S1_at

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