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Summary Expression Gene Literature (25) GO Terms (36) Nucleotides (108) Proteins (32) Interactants (901) Wiki
XB-GENEPAGE-479054

Gene Symbol: foxc1

Gene Name: forkhead box C1

Synonyms: igda , ihg1 , fkhl7 , irid1 , rieg3 , freac3 , freac-3 , xfd-11 , foxc1-a , foxc1-b ( Add Xenopus synonyms , Nomenclature history )

Gene Function: forkhead domain transcription factor

Protein Function :
DNA-binding transcriptional factor that plays a role in a broad range of cellular and developmental processes such as eye, bones, cardiovascular, kidney and skin development. Acts either as a transcrip...[+]

Interactants: Loading ...
Disease Ontology: iridogoniodysgenesis syndrome

OMIM Diseases: ANTERIOR SEGMENT DYSGENESIS 3; ASGD3 [+]

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Xenbase Gene ID XB-GENE-479055 XB-GENE-865236 XB-GENE-6252135
Gene Symbol foxc1 foxc1.L foxc1.S
Chromosome Chr06 chr6L chr6S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
Entrez Gene
mRNA Refseq Refseq Refseq
Protein Refseq Swiss-Prot Swiss-Prot Refseq Swiss-Prot TrEMBL Swiss-Prot Refseq Swiss-Prot TrEMBL Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine foxc1 foxc1.L foxc1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards FOXC1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Foxc1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR foxc1b foxc1a ZFIN Ensembl
chicken
GEISHA FOXC1 Ensembl
fruit fly
worm
WORMBASE
Publications
First Expression pattern of the winged helix factor XFD-11 during Xenopus embryogenesis., Mech Dev 1998      
Most Recent Shared evolutionary origin of vertebrate neural crest and cranial placodes., Nature 2018        
All View All Papers 5 paper(s) referencing morpholinos 2 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 36 terms 13 terms 13 terms
PANTHER foxc1
KEGG Pathways K09396 K09396 K09396
KOG [K] Forkhead/HNF-3-related transcription factor (alt_id KOG:3563)
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones   EXRC - 1 clone(s)  
Dharmacon Dharmacon Dharmacon
Morpholino foxc1 MO1 foxc1 MO1 foxc1 MO1
ORF foxc1.L ORF1
Affymetrix 1.0 Str.6156.1.S1_a_at [+] Xl.180.1.S1_at
Affymetrix 2.0 Xl2.53777.1.S1_at Xl2.34915.1.S1_s_at

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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