foxd4l1.1 Summary [species: Xenopus laevis and Xenopus tropicalis]

Summary

Expression

Gene Literature (38)

XB-GENEPAGE-479246

Gene Symbol:

foxd4l1.1

Gene Name:

forkhead box D4 like 1, gene 1

Synonyms:

foxD5a , xlFoxD5a , xlFoxD5b , xtFoxD5 , foxd5 , Xfd-12 , FoxD5b , XFlip , foxd4 , Foxd4l1 , foxd4l1.1-a , foxd4l1.1-b ( Add synonyms , Nomenclature history )

Gene Function:

forkhead domain transcription factor

Protein Function Downloaded from UniProtKB

Transcriptional repressor with a role in dorsal axis formation and neural plate expansion; maintains an undifferentiated neural ectoderm after neural induction.

InterPro

Integrase-like cat sf , Integrase recombinase N , DNA brk join enz , Integrase SAM-like N [+]

Interactants:

Loading ...

Diseases:

External Links:

ClinVar, ClinGen, MalaCards, KEGG Disease, DECIPHER, COSMIC, MARRVEL, GTR, DisGeNET, dbVAR, GHR, gnomAD

1/6

Xenbase Gene ID

XB-GENE-479247

XB-GENE-6252054

XB-GENE-865254

Gene Symbol

foxd4l1.1

foxd4l1.1.L

foxd4l1.1.S

Chromosome

Chr1

chr1L

chr1S

Molecules

X. tropicalis

X. laevis.L

X. laevis.S

Genomic Sequence

Version 9.1

>foxd4l1.1 9.1 
							CTTGGCCCTTTGGAGACTACACATTCACAGAAAGCATCAGTGCTAGCAATGAGCCTTAGCCAGGAGTCTGGTGCCCACCATGACCCCCAGGATTATCCGGTAGTATCTGATGAGGAGGATGAAATTGATATTCTTGGAGAAGATGATTCCTGCAGTCTAAAGTCACACTTTTACCTACAGCCAACACATTCAGAGATGGGGGACAGTGGCATTCTGAGCCCTTCCAAGCTAAGCTGCACTGAAAGTGAGAGCGATTCCTCTGGAGAGAGTGAAGGAGGTACTTCTAAAGACTCCCCAGCCACCCCATCTGGTGGCAAAGCCAAAAGGGCCCTTGTAAAGCCCCCTTATTCTTATATTGCTCTAATCACTATGGCTATCCTGCAGAGCCCACACAAGAAACTGACTCTCAGTGGCATCTGTGATTTTATCAGCAGCAAGTTCCCTTACTACAAGGACAAGTTCCCTGCTTGGCAGAACTCCATCAGGCACAACCTGTCCCTTAATGACTGCTTTATTAAAATACCACGGGAACCAGGAAATCCAGGAAAAGGCAACTACTGGACCCTGGACCCTGCCTCTGAGGACATGTTTGATAATGGGAGCTTCCTTAGAAGGCGGAAAAGGTTTAAGAGGCACCAGCAGGAGTTCTTTAAAGATGGACTTGTGATGTACAACCCACTGCCTTACTACAGACCCTACAGTACCATCCAACCACAGCAAGTGCTCCAGCAGACTCCAGTGGCATGCATGGCAATACCAGAAAATTTGACCATGCCAACTCACCTTGCTCCCTACCCAGACATAAAGAGGAAAGTTCCTTACCCTGACCAGGGGGTACACAGGGGGTTTGAAGCCCTGGATGCTGATAACCACCCCAATAAGTCTCAGAGCAAATGTTCATTTAGTATTGAGAACATCATGAGGAAACCCAAGGAGCCAGAGCCAAGTTTTTCAACCTTTAACCCACACTGGAACTATAATCACTTATTGCAGAGGCCAAATTCCTGCCTTCTCCCAGCTGTGCTTAACCTATCCACTGGCCCTTTCCTATCCAATGCCCAGGGCACCAGGCAATACAACCTCATAAAATTCCCTGGGTGTTACTGAAGTAAGTCACTTTGGGTCTCACATAGCCCCTGTACTGCCCTACCCATATCCTTTCAGGATTTTTCCTTATAACTGGTGGATTCTGCCACTAGGACTTTCTTGTGTCCAACCCAgagattttcattttatttattgtcaaagacagGTTTATCCAATCTGCATCTAGCATCCCCTAAATTATAAGGTTGTCAGGGGAGATGATAGTTGCAGTTCATTAACAGCTGAAGGGCCACCAGTTGTAAATACCTCGACAGTCATAAGTACTTGTGTGAGAGCCCCAAGTGGCACATGTGATGCTGGATGCTTGAATCGCTATGGATTGTATGTGTATTTAGAGACACTGAAATGATGGCTGAGGACTTCACTTGGCCCCTGTGGGCAACGGGTATGCAGTTTTGTAATGTCATTTGTTTGCTTTTATGTCTTATTTTTCtgttaatatttaatgtaaatagaaatgtaatctattgaattatttattatgaaATTTATTGCAACTTTTCGCTTCTACTCACATGAATAAAATCATTCAAATGAATATACGGACTGTAGATATTTCTTTCCATATACAAACATTCATATAAACTTTACTTTCCATCATCACTTTACATCATAATCTTAATTTGTGCAATTTCAGGTTCTTTAGCACAATATTTTCACagctttctgtctgtctgtcaacATActtgtttatctatctatctatctatctatctatctatctatctatctatcatctatctatccatctttttctatctatataaaatatactttatagcCTTTTGTTAAATTGTTATTGCAGCGTGGAACCAGTCTTTCCAAAACCAGGTTATAGGTTAACCCTGCTGATCTTAAAAGTACAATATAAATTTTCAGCATAGCAAGAACATAACTAACACTAAACTGCCCATCATTTCTCTACAACAAATGTAACAAATGAATAGGGAGTAAAAACTGTGGGAGGTTCATTATTTGAAGTATTTAATTTTGGGGGAAATGTAATTAAACGTCACACAGTTTAAGATATAACAACAATAAATTCAAATTAACATTTCCTATGCCcgataatatttaatataaaattttatCACTGAAGCCAGTACTCATACCCGTACATGAATATTATTTTAGATACTTCATACACTAATTTtctctaaataaaaatatgtgtCAGACCAAAATCTTCATTTCACATTCTGCAAATGAAGCCACTAATAGGTTATACAGCAGAAAGTTACAGGCAAAGGCTGTGCATTTCTCTAAATGATTTTAATCATACTTTTTGTTGGGTTTTATTTCACTATAAGATCCTCTGGATTTATGATGTGCCGATTATAAGGAAGAGATAGCTTCCCACGACATCTAGGTTTGGGGGTTTACAGCCGATGGATATCAGCTGTTGCTTGTGCTTATGGGGTCTTTAAAAAATACAGGGCACAGTCCAGCAGTAGGAATTCTACATTTTTTAGAGGTCCATGGGACTTATGTAAAGTAAATTGCAacacctgctgattagttgctacagATCACTTCAAGGTCCAATTGAGCCCCTGTGAGTCCTCAGTACGTCAATGGTaatttttttccagttatttcattttaattgttGCTATGTGACACTTCACTGGTATTGTTTTACTGAATATCTGGTGAGGTAGCTGTGTTAATGTCACTTTCCTTTTTTAATGGAGCCTGGGGGTGTAGAAGGAAAGTAAACTTGCAGACCACTTGGGGATTGGTCtttgaaaaatgtttgttttgcaagAAACATAAAGTTTTATCTGTACTACCTTCTTC

Version 9.2

CDS

Gene model

Entrez Gene

549682

398016

398170

mRNA

RefSeq

Protein

RefSeq

Swiss-Prot

More..

RefSeq

Swiss-Prot

More..

RefSeq

Swiss-Prot

More..

Genomic

X. tropicalis

X. laevis.L

X. laevis.S

Genome Browser

(Click image to open in Genome Browser)

Genomic Synteny

Genomicus PANTHER

Expression

Development Stages

Embryonic Tissues

Adult Tissues

Summary for

More Information

Xenbase Expression Details

In situ images

Single cell data at SPRING

Ensembl

Data Mining

X. tropicalis

X. laevis.L

X. laevis.S

XenMine

foxd4l1.1

foxd4l1.1.L

foxd4l1.1.S

Orthology

Knowledgebases

Entrez Gene

Genetic Phenotypes

Gene Expression

human

HGNC AGR, OMIM:Gene, GeneCards

FOXD4L1

OMIM

Ensembl, Allen Brain Atlas, Protein Atlas

mouse

MGI, AGR

Foxd4

MGI, IMPC

Ensembl, Allen Brain Atlas, Eurexpress, MGI

rat

zebrafish

chicken

fruit fly

worm

Publications

First

Characterization of a subfamily of related winged helix genes, XFD-12/12''/12" (XFLIP), during Xenopus embryogenesis., Mech Dev 1999

Most Recent

Natural size variation among embryos leads to the corresponding scaling in gene expression., Dev Biol 2020

All

View All Papers 5 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs 1 paper(s) referencing Disease Ontology

Functional Ontologies

X. tropicalis

X. laevis.L

X. laevis.S

8 terms

10 terms

PANTHER

foxd4l1.1

KEGG Pathways

K09397

KOG

[K] Transcription factor of the Forkhead/HNF3 family

Reagents

X. tropicalis

X. laevis.L

X. laevis.S

CRISPRscan Tracks

foxd4l1.1

Morpholinos

foxd4l1.1 MO1

Clones

EXRC Horizon Source BioScience

Horizon Source BioScience

Plasmids

Addgene

Symbol legend:

Blast sequence

View sequence

Literature or expression images

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